Csor.00g166010 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g166010
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	type 2 DNA topoisomerase 6 subunit B-like isoform X4
Location	Csor_Chr05: 74744 .. 76644 (+)
RNA-Seq Expression	Csor.00g166010
Synteny	Csor.00g166010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTGTGGCCGACGGCCAGGATGTCCCAGGGTCACGTAATGATGCTGTTTTCCTGCAAAAATTTTCCCCTAGTTCCTCTTTTGCAGCTTCAACTCTTGATCATTTGAAATTGGGCCTTGAGAGTTATGTATTAAGGCATGGATCCAGTTTGGCCTGTGACTCTTGTTTCCCTAACAGGTGAGTTTGTTACTTTAATTTACGCCAACTCGTTGTTAGACTGAACTTCTCTGGTTATAGGTGGGTTATAAAGAGTACAAATAATTTCCTGATGAGATATGAAGAAACTTTGTTCCAGTCTGCACTCATAGTTTAAATGATTTAGCTGTTAAATTCGCCTACGATGTGCATTATATTATTATTATTTTTTTTTCAAATTTCAAACTTTAGGGATAATCTGAGGAGTGGGGGTGGAATGGTTTGTGAAGACAAGCATAAAACTACCAAACTGGTAGTGGAGGCAGCGGTCGTGACTAGTGAAACATCAAACCCGACCAATAATTGCTTTGGAGCAGGATGCTCTGATACGAAGGTTATTTGACCTATTACCCTCCCTTCCTTCCCGTTCTTTCCGCTTCAGAAAGTACCATGCAACTCTGGCTTAATTCTGATTATTGCTCATGATTACATAGGTTCTCTGTTTTAAAGATTTTGCGCCTTGTTCAATCTCCGAGGCACTTCTGAAGGCATTAACAGGCATTGACTGGAAACGTTATGGATTGGCTTTGGAATGTGCTATCGATCAAAGAAGTCATGCACTATTAAAGTGGGAACACATGCCCCTATCTTTTCATATTCATATTGTTGTCCACTGCTATGATAAGGTATAATATTCATTTAATCTTATGTTTGAATGTTGATAAAGAAGGATAATTTTGATCGTTATTTTGTATGGTATATAAAATTCGTTTTCTGCCTTAGCTTGTGTTCGAGGCCATGCCTTTGTTGCAGAAGACACGGTTTGATAAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTGGACGACTTCAAGAATAAACATGCGGGAGTTCTTCTCAGTGCCGATACCCTCAAGGTAAATCTCTATTTCACTGTCTCATGTGCACAGACTAAATTAATAATTAAACAGGTGTATTTTTAGTTTTAAAGTAGAAGCCCTTTTTTGTGGAAGATCATAATATTTTCAACTTATTTTAAAATCTCAACCCTTCACGAAGACTAACGTAGTTTAGCCAAGAATTCTGCTTACACGTTTTAAGTTTGGCAAATGACTTCTTTATCGTGATGAATTATCTTCGAAATGCACGCAATACTATATGCATCCTTTTGCATGTGTAATTGTTCGCTGCAATTAGAAGTTGAATTTGTTCAGAATCTCAATATGGCATTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTGTGTTCTTTTAAAGACATTCGATAAGTGATTGGCACATGCTTTATTATACATATGGCCGGCCATGCACTCTGAACAGTGCTTTGTAGTAAAAAGGATAAGAGCTTGCTTTCTCATAATTTTAGGTTATGGTCAGGTCTTAGCATGTTCCCGTAGGAATCAAGAGCAGCTTCCTAAACTTGCTTCCATTTTTCATCTTCAGATCAGTAAGTTTGCCCCTGATCTTGCCAAATCAATTGCTGGCCTAGTTTTATACTCCAGTGACATGGATTTCAAAGAAGAATGCCTTGCAATTCTTGGCTTGCAACCTCATCAATCAGAAGGGGAAATTGTTGGAGAAAATATAAAGAAAAAGATCATTTCAGCCATAGAGGTGAATGACCGAAGGCAACAAGGAACTAAAGAAGTTGCCCCTCTTCTGTTTGAAGGTCGCCACGAACTACAGTTTGTGGACGATGAATGTGATGAAGATGGTTTTGATCCAATGGATTTGTAA

mRNA sequence

ATGGAAGTTGTGGCCGACGGCCAGGATGTCCCAGGGTCACGTAATGATGCTGTTTTCCTGCAAAAATTTTCCCCTAGTTCCTCTTTTGCAGCTTCAACTCTTGATCATTTGAAATTGGGCCTTGAGAGTTATGTATTAAGGCATGGATCCAGTTTGGCCTGTGACTCTTGTTTCCCTAACAGGGATAATCTGAGGAGTGGGGGTGGAATGGTTTGTGAAGACAAGCATAAAACTACCAAACTGGTAGTGGAGGCAGCGGTCGTGACTAGTGAAACATCAAACCCGACCAATAATTGCTTTGGAGCAGGATGCTCTGATACGAAGGTTCTCTGTTTTAAAGATTTTGCGCCTTGTTCAATCTCCGAGGCACTTCTGAAGGCATTAACAGGCATTGACTGGAAACGTTATGGATTGGCTTTGGAATGTGCTATCGATCAAAGAAGTCATGCACTATTAAAGTGGGAACACATGCCCCTATCTTTTCATATTCATATTGTTGTCCACTGCTATGATAAGCTTGTGTTCGAGGCCATGCCTTTGTTGCAGAAGACACGGTTTGATAAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTGGACGACTTCAAGAATAAACATGCGGGAGTTCTTCTCAGTGCCGATACCCTCAAGGTCTTAGCATGTTCCCGTAGGAATCAAGAGCAGCTTCCTAAACTTGCTTCCATTTTTCATCTTCAGATCAGTAAGTTTGCCCCTGATCTTGCCAAATCAATTGCTGGCCTAGTTTTATACTCCAGTGACATGGATTTCAAAGAAGAATGCCTTGCAATTCTTGGCTTGCAACCTCATCAATCAGAAGGGGAAATTGTTGGAGAAAATATAAAGAAAAAGATCATTTCAGCCATAGAGGTGAATGACCGAAGGCAACAAGGAACTAAAGAAGTTGCCCCTCTTCTGTTTGAAGGTCGCCACGAACTACAGTTTGTGGACGATGAATGTGATGAAGATGGTTTTGATCCAATGGATTTGTAA

Coding sequence (CDS)

ATGGAAGTTGTGGCCGACGGCCAGGATGTCCCAGGGTCACGTAATGATGCTGTTTTCCTGCAAAAATTTTCCCCTAGTTCCTCTTTTGCAGCTTCAACTCTTGATCATTTGAAATTGGGCCTTGAGAGTTATGTATTAAGGCATGGATCCAGTTTGGCCTGTGACTCTTGTTTCCCTAACAGGGATAATCTGAGGAGTGGGGGTGGAATGGTTTGTGAAGACAAGCATAAAACTACCAAACTGGTAGTGGAGGCAGCGGTCGTGACTAGTGAAACATCAAACCCGACCAATAATTGCTTTGGAGCAGGATGCTCTGATACGAAGGTTCTCTGTTTTAAAGATTTTGCGCCTTGTTCAATCTCCGAGGCACTTCTGAAGGCATTAACAGGCATTGACTGGAAACGTTATGGATTGGCTTTGGAATGTGCTATCGATCAAAGAAGTCATGCACTATTAAAGTGGGAACACATGCCCCTATCTTTTCATATTCATATTGTTGTCCACTGCTATGATAAGCTTGTGTTCGAGGCCATGCCTTTGTTGCAGAAGACACGGTTTGATAAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTGGACGACTTCAAGAATAAACATGCGGGAGTTCTTCTCAGTGCCGATACCCTCAAGGTCTTAGCATGTTCCCGTAGGAATCAAGAGCAGCTTCCTAAACTTGCTTCCATTTTTCATCTTCAGATCAGTAAGTTTGCCCCTGATCTTGCCAAATCAATTGCTGGCCTAGTTTTATACTCCAGTGACATGGATTTCAAAGAAGAATGCCTTGCAATTCTTGGCTTGCAACCTCATCAATCAGAAGGGGAAATTGTTGGAGAAAATATAAAGAAAAAGATCATTTCAGCCATAGAGGTGAATGACCGAAGGCAACAAGGAACTAAAGAAGTTGCCCCTCTTCTGTTTGAAGGTCGCCACGAACTACAGTTTGTGGACGATGAATGTGATGAAGATGGTTTTGATCCAATGGATTTGTAA

Protein sequence

MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPNRDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSISEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPLLQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQISKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDRRQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL

Homology

[Close]

BLAST of Csor.00g166010 vs. ExPASy Swiss-Prot
Match: Q5Q0E6 (Type 2 DNA topoisomerase 6 subunit B-like OS=Arabidopsis thaliana OX=3702 GN=MTOPVIB PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.7e-52
Identity = 122/319 (38.24%), Postives = 172/319 (53.92%), Query Frame = 0


Query: 11  PGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSL--ACDSCFPNRDNLRSGG 70
           PG++   VF      +  F AS L+ LK GLE YVLRH + L   CD CF +R++L+ G 
Sbjct: 169 PGNQTQYVFAVNADKTPCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGS 228

Query: 71  GMVC-EDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSISEALLKA 130
           G VC EDKHK     +E  +V S+    T +C  +    T+VL F +F P  +    L A
Sbjct: 229 GTVCQEDKHKRVGGTMEVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSA 288

Query: 131 LTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPLLQKTRFD 190
           L  IDWK+YGL L    DQ  H  L+W++ P    I I +H Y        P  QK    
Sbjct: 289 LKKIDWKKYGLILANVNDQDGHVFLEWDNFPSYVQIQIALHWY----HNQYPTRQKNGPG 348

Query: 191 KKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQISKFAPDL 250
             L++K +K ALD+ K KH G LLS+ + K+  CS                    + PDL
Sbjct: 349 ISLLKKGIKNALDNLKAKHEGFLLSSHSRKI--CS--------------------YVPDL 408

Query: 251 AKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDRRQQGTKE 310
           A+SIAGL+  S+D+DF+ +CL++LG Q  + E + V   I++KI++ I +N+R+ Q  +E
Sbjct: 409 ARSIAGLIFSSTDLDFQGDCLSVLGFQTQEVERDTVENYIQRKIVTVIGMNERKPQKDQE 461

Query: 311 VAP-LLFEGRHELQFVDDE 326
            AP L F+G  E  F +DE
Sbjct: 469 AAPFLFFDGESETSFFEDE 461

[Close]

BLAST of Csor.00g166010 vs. NCBI nr
Match: KAG6598214.1 (Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 675 bits (1741), Expect = 9.51e-245
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL
Sbjct: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336

[Close]

BLAST of Csor.00g166010 vs. NCBI nr
Match: XP_022962326.1 (type 2 DNA topoisomerase 6 subunit B-like isoform X5 [Cucurbita moschata])

HSP 1 Score: 666 bits (1718), Expect = 7.03e-239
Identity = 330/336 (98.21%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEV+ADGQDVPGSRNDAVFL+KFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 148 MEVMADGQDVPGSRNDAVFLEKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 207

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSE  NPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 208 RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSI 267

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 268 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 327

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 328 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 387

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 388 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 447

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGT+EVAPLLFEGRHELQ+VDDECDEDGFDPMDL
Sbjct: 448 RQQGTREVAPLLFEGRHELQYVDDECDEDGFDPMDL 483

[Close]

BLAST of Csor.00g166010 vs. NCBI nr
Match: XP_022962325.1 (type 2 DNA topoisomerase 6 subunit B-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 666 bits (1718), Expect = 7.29e-239
Identity = 330/336 (98.21%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEV+ADGQDVPGSRNDAVFL+KFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 149 MEVMADGQDVPGSRNDAVFLEKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 208

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSE  NPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 209 RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSI 268

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 269 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 328

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 329 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 388

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 389 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 448

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGT+EVAPLLFEGRHELQ+VDDECDEDGFDPMDL
Sbjct: 449 RQQGTREVAPLLFEGRHELQYVDDECDEDGFDPMDL 484

[Close]

BLAST of Csor.00g166010 vs. NCBI nr
Match: XP_022962324.1 (type 2 DNA topoisomerase 6 subunit B-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 666 bits (1718), Expect = 7.84e-239
Identity = 330/336 (98.21%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEV+ADGQDVPGSRNDAVFL+KFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 151 MEVMADGQDVPGSRNDAVFLEKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 210

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSE  NPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 211 RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSI 270

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 271 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 330

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 331 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 390

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 391 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 450

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGT+EVAPLLFEGRHELQ+VDDECDEDGFDPMDL
Sbjct: 451 RQQGTREVAPLLFEGRHELQYVDDECDEDGFDPMDL 486

[Close]

BLAST of Csor.00g166010 vs. NCBI nr
Match: XP_022962323.1 (type 2 DNA topoisomerase 6 subunit B-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 666 bits (1718), Expect = 9.40e-239
Identity = 330/336 (98.21%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEV+ADGQDVPGSRNDAVFL+KFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 156 MEVMADGQDVPGSRNDAVFLEKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 215

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSE  NPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 216 RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSI 275

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 276 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 335

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 336 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 395

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 396 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 455

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGT+EVAPLLFEGRHELQ+VDDECDEDGFDPMDL
Sbjct: 456 RQQGTREVAPLLFEGRHELQYVDDECDEDGFDPMDL 491

[Close]

BLAST of Csor.00g166010 vs. ExPASy TrEMBL
Match: A0A6J1HCT4 (type 2 DNA topoisomerase 6 subunit B-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111462807 PE=4 SV=1)

HSP 1 Score: 666 bits (1718), Expect = 3.40e-239
Identity = 330/336 (98.21%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEV+ADGQDVPGSRNDAVFL+KFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 148 MEVMADGQDVPGSRNDAVFLEKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 207

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSE  NPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 208 RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSI 267

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 268 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 327

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 328 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 387

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 388 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 447

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGT+EVAPLLFEGRHELQ+VDDECDEDGFDPMDL
Sbjct: 448 RQQGTREVAPLLFEGRHELQYVDDECDEDGFDPMDL 483

[Close]

BLAST of Csor.00g166010 vs. ExPASy TrEMBL
Match: A0A6J1HEQ4 (type 2 DNA topoisomerase 6 subunit B-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111462807 PE=4 SV=1)

HSP 1 Score: 666 bits (1718), Expect = 3.53e-239
Identity = 330/336 (98.21%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEV+ADGQDVPGSRNDAVFL+KFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 149 MEVMADGQDVPGSRNDAVFLEKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 208

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSE  NPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 209 RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSI 268

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 269 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 328

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 329 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 388

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 389 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 448

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGT+EVAPLLFEGRHELQ+VDDECDEDGFDPMDL
Sbjct: 449 RQQGTREVAPLLFEGRHELQYVDDECDEDGFDPMDL 484

[Close]

BLAST of Csor.00g166010 vs. ExPASy TrEMBL
Match: A0A6J1HGR7 (type 2 DNA topoisomerase 6 subunit B-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111462807 PE=4 SV=1)

HSP 1 Score: 666 bits (1718), Expect = 3.80e-239
Identity = 330/336 (98.21%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEV+ADGQDVPGSRNDAVFL+KFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 151 MEVMADGQDVPGSRNDAVFLEKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 210

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSE  NPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 211 RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSI 270

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 271 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 330

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 331 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 390

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 391 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 450

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGT+EVAPLLFEGRHELQ+VDDECDEDGFDPMDL
Sbjct: 451 RQQGTREVAPLLFEGRHELQYVDDECDEDGFDPMDL 486

[Close]

BLAST of Csor.00g166010 vs. ExPASy TrEMBL
Match: A0A6J1HEH3 (type 2 DNA topoisomerase 6 subunit B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462807 PE=4 SV=1)

HSP 1 Score: 666 bits (1718), Expect = 4.55e-239
Identity = 330/336 (98.21%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEV+ADGQDVPGSRNDAVFL+KFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 156 MEVMADGQDVPGSRNDAVFLEKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 215

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSE  NPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 216 RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSI 275

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 276 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 335

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 336 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 395

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 396 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 455

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGT+EVAPLLFEGRHELQ+VDDECDEDGFDPMDL
Sbjct: 456 RQQGTREVAPLLFEGRHELQYVDDECDEDGFDPMDL 491

[Close]

BLAST of Csor.00g166010 vs. ExPASy TrEMBL
Match: A0A6J1HCE6 (type 2 DNA topoisomerase 6 subunit B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462807 PE=4 SV=1)

HSP 1 Score: 666 bits (1718), Expect = 4.89e-239
Identity = 330/336 (98.21%), Postives = 334/336 (99.40%), Query Frame = 0


Query: 1   MEVVADGQDVPGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 60
           MEV+ADGQDVPGSRNDAVFL+KFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN
Sbjct: 158 MEVMADGQDVPGSRNDAVFLEKFSPSSSFAASTLDHLKLGLESYVLRHGSSLACDSCFPN 217

Query: 61  RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSI 120
           RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSE  NPTNNCFGAGCSDTKVLCFKDFAPCSI
Sbjct: 218 RDNLRSGGGMVCEDKHKTTKLVVEAAVVTSEIPNPTNNCFGAGCSDTKVLCFKDFAPCSI 277

Query: 121 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 180
           SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL
Sbjct: 278 SEALLKALTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPL 337

Query: 181 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 240
           LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI
Sbjct: 338 LQKTRFDKKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQI 397

Query: 241 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 300
           SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR
Sbjct: 398 SKFAPDLAKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDR 457

Query: 301 RQQGTKEVAPLLFEGRHELQFVDDECDEDGFDPMDL 336
           RQQGT+EVAPLLFEGRHELQ+VDDECDEDGFDPMDL
Sbjct: 458 RQQGTREVAPLLFEGRHELQYVDDECDEDGFDPMDL 493

[Close]

BLAST of Csor.00g166010 vs. TAIR 10
Match: AT1G60460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 23 Blast hits to 23 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-53
Identity = 124/323 (38.39%), Postives = 174/323 (53.87%), Query Frame = 0


Query: 11  PGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSL--ACDSCFPNRDNLRSGG 70
           PG++   VF      +  F AS L+ LK GLE YVLRH + L   CD CF +R++L+ G 
Sbjct: 169 PGNQTQYVFAVNADKTPCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGS 228

Query: 71  GMVC-EDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSISEALLKA 130
           G VC EDKHK     +E  +V S+    T +C  +    T+VL F +F P  +    L A
Sbjct: 229 GTVCQEDKHKRVGGTMEVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSA 288

Query: 131 LTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPLLQKTRFD 190
           L  IDWK+YGL L    DQ  H  L+W++ P    I I +H Y        P  QK    
Sbjct: 289 LKKIDWKKYGLILANVNDQDGHVFLEWDNFPSYVQIQIALHWY----HNQYPTRQKNGPG 348

Query: 191 KKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQISKFAPDL 250
             L++K +K ALD+ K KH G LLS+ + K+  CS                    + PDL
Sbjct: 349 ISLLKKGIKNALDNLKAKHEGFLLSSHSRKI--CS--------------------YVPDL 408

Query: 251 AKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDRRQQGTKE 310
           A+SIAGL+  S+D+DF+ +CL++LG Q  + E + V   I++KI++ I +N+R+ Q  +E
Sbjct: 409 ARSIAGLIFSSTDLDFQGDCLSVLGFQTQEVERDTVENYIQRKIVTVIGMNERKPQKDQE 465

Query: 311 VAP-LLFEGRHELQFVDDECDED 330
            AP L F+G  E  F +DE  ED
Sbjct: 469 AAPFLFFDGESETSFFEDEEVED 465

[Close]

BLAST of Csor.00g166010 vs. TAIR 10
Match: AT1G60460.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-53
Identity = 122/319 (38.24%), Postives = 172/319 (53.92%), Query Frame = 0


Query: 11  PGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSL--ACDSCFPNRDNLRSGG 70
           PG++   VF      +  F AS L+ LK GLE YVLRH + L   CD CF +R++L+ G 
Sbjct: 158 PGNQTQYVFAVNADKTPCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGS 217

Query: 71  GMVC-EDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSISEALLKA 130
           G VC EDKHK     +E  +V S+    T +C  +    T+VL F +F P  +    L A
Sbjct: 218 GTVCQEDKHKRVGGTMEVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSA 277

Query: 131 LTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPLLQKTRFD 190
           L  IDWK+YGL L    DQ  H  L+W++ P    I I +H Y        P  QK    
Sbjct: 278 LKKIDWKKYGLILANVNDQDGHVFLEWDNFPSYVQIQIALHWY----HNQYPTRQKNGPG 337

Query: 191 KKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQISKFAPDL 250
             L++K +K ALD+ K KH G LLS+ + K+  CS                    + PDL
Sbjct: 338 ISLLKKGIKNALDNLKAKHEGFLLSSHSRKI--CS--------------------YVPDL 397

Query: 251 AKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDRRQQGTKE 310
           A+SIAGL+  S+D+DF+ +CL++LG Q  + E + V   I++KI++ I +N+R+ Q  +E
Sbjct: 398 ARSIAGLIFSSTDLDFQGDCLSVLGFQTQEVERDTVENYIQRKIVTVIGMNERKPQKDQE 450

Query: 311 VAP-LLFEGRHELQFVDDE 326
            AP L F+G  E  F +DE
Sbjct: 458 AAPFLFFDGESETSFFEDE 450

[Close]

BLAST of Csor.00g166010 vs. TAIR 10
Match: AT1G60460.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-53
Identity = 122/319 (38.24%), Postives = 172/319 (53.92%), Query Frame = 0


Query: 11  PGSRNDAVFLQKFSPSSSFAASTLDHLKLGLESYVLRHGSSL--ACDSCFPNRDNLRSGG 70
           PG++   VF      +  F AS L+ LK GLE YVLRH + L   CD CF +R++L+ G 
Sbjct: 169 PGNQTQYVFAVNADKTPCFTASNLERLKSGLEDYVLRHANCLDTMCDYCFSDREHLKVGS 228

Query: 71  GMVC-EDKHKTTKLVVEAAVVTSETSNPTNNCFGAGCSDTKVLCFKDFAPCSISEALLKA 130
           G VC EDKHK     +E  +V S+    T +C  +    T+VL F +F P  +    L A
Sbjct: 229 GTVCQEDKHKRVGGTMEVVIVISDLLESTQHCSRSCNGKTEVLYFDNFLPSPVPHLALSA 288

Query: 131 LTGIDWKRYGLALECAIDQRSHALLKWEHMPLSFHIHIVVHCYDKLVFEAMPLLQKTRFD 190
           L  IDWK+YGL L    DQ  H  L+W++ P    I I +H Y        P  QK    
Sbjct: 289 LKKIDWKKYGLILANVNDQDGHVFLEWDNFPSYVQIQIALHWY----HNQYPTRQKNGPG 348

Query: 191 KKLIRKAVKLALDDFKNKHAGVLLSADTLKVLACSRRNQEQLPKLASIFHLQISKFAPDL 250
             L++K +K ALD+ K KH G LLS+ + K+  CS                    + PDL
Sbjct: 349 ISLLKKGIKNALDNLKAKHEGFLLSSHSRKI--CS--------------------YVPDL 408

Query: 251 AKSIAGLVLYSSDMDFKEECLAILGLQPHQSEGEIVGENIKKKIISAIEVNDRRQQGTKE 310
           A+SIAGL+  S+D+DF+ +CL++LG Q  + E + V   I++KI++ I +N+R+ Q  +E
Sbjct: 409 ARSIAGLIFSSTDLDFQGDCLSVLGFQTQEVERDTVENYIQRKIVTVIGMNERKPQKDQE 461

Query: 311 VAP-LLFEGRHELQFVDDE 326
            AP L F+G  E  F +DE
Sbjct: 469 AAPFLFFDGESETSFFEDE 461

The following BLAST results are available for this feature:

BLAST of Csor.00g166010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5Q0E6	3.7e-52	38.24	Type 2 DNA topoisomerase 6 subunit B-like OS=Arabidopsis thaliana OX=3702 GN=MTO...	[more]

BLAST of Csor.00g166010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598214.1	9.51e-245	100.00	Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosper...	[more]
XP_022962326.1	7.03e-239	98.21	type 2 DNA topoisomerase 6 subunit B-like isoform X5 [Cucurbita moschata]	[more]
XP_022962325.1	7.29e-239	98.21	type 2 DNA topoisomerase 6 subunit B-like isoform X4 [Cucurbita moschata]	[more]
XP_022962324.1	7.84e-239	98.21	type 2 DNA topoisomerase 6 subunit B-like isoform X3 [Cucurbita moschata]	[more]
XP_022962323.1	9.40e-239	98.21	type 2 DNA topoisomerase 6 subunit B-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Csor.00g166010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCT4	3.40e-239	98.21	type 2 DNA topoisomerase 6 subunit B-like isoform X5 OS=Cucurbita moschata OX=36...	[more]
A0A6J1HEQ4	3.53e-239	98.21	type 2 DNA topoisomerase 6 subunit B-like isoform X4 OS=Cucurbita moschata OX=36...	[more]
A0A6J1HGR7	3.80e-239	98.21	type 2 DNA topoisomerase 6 subunit B-like isoform X3 OS=Cucurbita moschata OX=36...	[more]
A0A6J1HEH3	4.55e-239	98.21	type 2 DNA topoisomerase 6 subunit B-like isoform X2 OS=Cucurbita moschata OX=36...	[more]
A0A6J1HCE6	4.89e-239	98.21	type 2 DNA topoisomerase 6 subunit B-like isoform X1 OS=Cucurbita moschata OX=36...	[more]

BLAST of Csor.00g166010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60460.1	1.2e-53	38.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G60460.2	2.6e-53	38.24	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT1G60460.3	2.6e-53	38.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034566	Type 2 DNA topoisomerase 6 subunit B-like, plants	PANTHER	PTHR36722	TYPE 2 DNA TOPOISOMERASE 6 SUBUNIT B-LIKE	coord: 1..219 coord: 234..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g166010.m01	Csor.00g166010.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042138	meiotic DNA double-strand break formation
molecular_function	GO:0016853	isomerase activity