Csor.00g164270 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g164270
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Location	Csor_Chr04: 8142343 .. 8143359 (-)
RNA-Seq Expression	Csor.00g164270
Synteny	Csor.00g164270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCTACAGTTGCGTTCTGGTTTCAGCCATTGCAGTTTCTCCCGCCAAGACTACATGCTTCAACGGACTTAATTATCCAACATTTTCCCCTTCTTCTTCTTCTTCCCTTGTAAACCCCTTTGTTAATTGTACCTTAACTTCTTCCATCATATACAGAGCAACTCCGGCCCCGGCCACCTGCGTTTACCCTGATCCGATACCGGAGTTTGCAGAAGTTGTAAGTTTTTTGCGACGTAGCTTCTTTGTCTGCTTAAATTGATTCCGGTTTTGTGTTATGTGATCGCGTTGATTAATTCATTTGGTTGTTTTTCGCAGGAAACCAAGAAATTTAAGGAGCAGTTATCGAAGAAGCTAGCGAAGGATCGCGAGACGTTTGGGAACGACCTCGATTCGGTTGTGGAGGTTTGCTCAAAGGTAATCATTGTTATAGAATGAAGAGGTTGTGATTTTCTAGTTTGAATCCCTGATTTCGGTTGAAGAATGTGTCTGAATCAGATGATGCGATTGTTTGCTTAGAGAGTAAGTTTAGTTTAATCGTGCTTTTGCCTTCAAATGTTTCCATGGCTTGAGATGAATAATTGAGACCTGAGAAAACATCAGACCGGCCTATAGAGCTACAGAACGATCACTATTTCCAAGACAGCTTCATTAATTGCGCAAAATTGTTCTGAATGTTTGACCTATGCTGCCATTATTGATATACTTCTTGCATTTTGATTTTTTCAAACCAGAACTGAACGAATATTCCAATTTGAATTCAGATGTCCGAATTTATGTGAGCTTAACATGAATGTACTTTGCAAGTTTTGAGCAGATATTTAGTGAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTAGTGGAGCCTTTCACTAATATGTTTATTGCTCTAAACGAGAGGAAATTACCTGGAGCGCCTTTGGCTGCAAGAACTTCGCTTCTATGGGCTCAAAACTATCTAGATCACGATTGGAACATTTGGATCTCAAAACGAGGGCTCAAATGA

mRNA sequence

ATGGCGTCCTACAGTTGCGTTCTGGTTTCAGCCATTGCAGTTTCTCCCGCCAAGACTACATGCTTCAACGGACTTAATTATCCAACATTTTCCCCTTCTTCTTCTTCTTCCCTTGTAAACCCCTTTGTTAATTGTACCTTAACTTCTTCCATCATATACAGAGCAACTCCGGCCCCGGCCACCTGCGTTTACCCTGATCCGATACCGGAGTTTGCAGAAGTTGAAACCAAGAAATTTAAGGAGCAGTTATCGAAGAAGCTAGCGAAGGATCGCGAGACGTTTGGGAACGACCTCGATTCGGTTGTGGAGGTTTGCTCAAAGATATTTAGTGAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTAGTGGAGCCTTTCACTAATATGTTTATTGCTCTAAACGAGAGGAAATTACCTGGAGCGCCTTTGGCTGCAAGAACTTCGCTTCTATGGGCTCAAAACTATCTAGATCACGATTGGAACATTTGGATCTCAAAACGAGGGCTCAAATGA

Coding sequence (CDS)

ATGGCGTCCTACAGTTGCGTTCTGGTTTCAGCCATTGCAGTTTCTCCCGCCAAGACTACATGCTTCAACGGACTTAATTATCCAACATTTTCCCCTTCTTCTTCTTCTTCCCTTGTAAACCCCTTTGTTAATTGTACCTTAACTTCTTCCATCATATACAGAGCAACTCCGGCCCCGGCCACCTGCGTTTACCCTGATCCGATACCGGAGTTTGCAGAAGTTGAAACCAAGAAATTTAAGGAGCAGTTATCGAAGAAGCTAGCGAAGGATCGCGAGACGTTTGGGAACGACCTCGATTCGGTTGTGGAGGTTTGCTCAAAGATATTTAGTGAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTAGTGGAGCCTTTCACTAATATGTTTATTGCTCTAAACGAGAGGAAATTACCTGGAGCGCCTTTGGCTGCAAGAACTTCGCTTCTATGGGCTCAAAACTATCTAGATCACGATTGGAACATTTGGATCTCAAAACGAGGGCTCAAATGA

Protein sequence

MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

Homology

[Close]

BLAST of Csor.00g164270 vs. ExPASy Swiss-Prot
Match: Q9XIK0 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRIN2 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-27
Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 0


Query: 3   SYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLT-SSIIYRATPAPAT 62
           S+ C L   I  SPA  +C   +    F      + V  F   +L+    + RA    A 
Sbjct: 21  SFRCAL--PIISSPAAVSC--AIKSTQFFKQRCRTKVRDFSLSSLSRRGFVCRA----AE 80

Query: 63  CVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPG 122
             +PDPIPEFAE ET+KF++ +  KL+K R+ F + +D +V VC++IF  +L  EYGGPG
Sbjct: 81  YKFPDPIPEFAEAETEKFRDHMLNKLSK-RDLFEDSVDEIVGVCTEIFETFLRSEYGGPG 140

Query: 123 TLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW 166
           TLLV PF +M   LNER+LPG P AAR ++ WAQ+++D DW  W
Sbjct: 141 TLLVIPFIDMADTLNERELPGGPQAARAAIKWAQDHVDKDWKEW 175

[Close]

BLAST of Csor.00g164270 vs. ExPASy Swiss-Prot
Match: B6UFC7 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Zea mays OX=4577 GN=PRIN2 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-24
Identity = 50/103 (48.54%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 64  YPDPIPEFAEVETKKFKEQLSKKLAKDRET-FGNDLDSVVEVCSKIFSEYLHVEYGGPGT 123
           +PDPIPEFAE ET KF+E ++ +L + +E  FG+ ++ +V+VC++I   +L  +Y GPGT
Sbjct: 67  FPDPIPEFAEQETSKFREHMAWRLEQKKEDYFGDHVEEIVDVCTEIMGTFLENDYRGPGT 126

Query: 124 LLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW 166
           LLV PF +M   + ER LPGAP AAR ++ WA+  +D DW  W
Sbjct: 127 LLVHPFLDMKGEIKERGLPGAPQAARAAIAWAEKNVDKDWKAW 169

[Close]

BLAST of Csor.00g164270 vs. ExPASy Swiss-Prot
Match: Q6H612 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PRIN2 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.9e-23
Identity = 67/169 (39.64%), Postives = 95/169 (56.21%), Query Frame = 0


Query: 11  AIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCV------- 70
           A AV+PA       LN P  + S+SSS  +  +  ++   +  RA P PA  V       
Sbjct: 7   AAAVAPAT------LNPPLLTLSASSSPSSSRLRRSVLGRLRSRA-PRPADFVCRRAKNA 66

Query: 71  ------YPDPIPEFAEVETKKFKEQLSKKLAKDRET-FGNDLDSVVEVCSKIFSEYLHVE 130
                 +PDPIPEFA  ET KFKE +  +L + ++  FG  ++ +V+VC++I   +L  +
Sbjct: 67  AYDDYKFPDPIPEFAAQETSKFKEHMMWRLEQKKDDYFGEHVEEIVDVCTEILGTFLEHD 126

Query: 131 YGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW 166
           Y GPGTLLV PF +M   + ER LPGAP AAR ++ WA+  +D DW  W
Sbjct: 127 YCGPGTLLVHPFLDMKGEIKERGLPGAPQAARAAIAWAEKNIDKDWKAW 168

[Close]

BLAST of Csor.00g164270 vs. NCBI nr
Match: KAG6601371.1 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032155.1 Protein PLASTID REDOX INSENSITIVE 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347 bits (891), Expect = 1.19e-120
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60
           MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60

Query: 61  TCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120
           TCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP
Sbjct: 61  TCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120

Query: 121 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172
           GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Sbjct: 121 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172

[Close]

BLAST of Csor.00g164270 vs. NCBI nr
Match: XP_022956735.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022956736.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 334 bits (857), Expect = 1.89e-115
Identity = 170/174 (97.70%), Postives = 170/174 (97.70%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60
           MASYSCVLVSAIAVSPAKTTCFNGLNYPTF PSSSS LVNPFVNCTLTSSIIYRATPAPA
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSS-LVNPFVNCTLTSSIIYRATPAPA 60

Query: 61  T--CVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYG 120
           T  CVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYG
Sbjct: 61  TATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYG 120

Query: 121 GPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172
           GPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Sbjct: 121 GPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 173

[Close]

BLAST of Csor.00g164270 vs. NCBI nr
Match: XP_023513727.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332 bits (852), Expect = 1.09e-114
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSS-LVNPFVNCTLTSSIIYRATPAP 60
           MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSS LV PFVNCTLTSSIIYRATPA 
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSSLVKPFVNCTLTSSIIYRATPAT 60

Query: 61  ATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGG 120
           A+CVY DPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGG
Sbjct: 61  ASCVYHDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGG 120

Query: 121 PGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172
           PGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Sbjct: 121 PGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 173

[Close]

BLAST of Csor.00g164270 vs. NCBI nr
Match: XP_023513712.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513720.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (838), Expect = 1.65e-112
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSS-LVNPFVNCTLTSSIIYRATPAP 60
           MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSS LV PFVNCTLTSSIIYRATPA 
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSSLVKPFVNCTLTSSIIYRATPAT 60

Query: 61  ATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSK---IFSEYLHVE 120
           A+CVY DPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSK   IFSEYLHVE
Sbjct: 61  ASCVYHDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKFEQIFSEYLHVE 120

Query: 121 YGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172
           YGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Sbjct: 121 YGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 176

[Close]

BLAST of Csor.00g164270 vs. NCBI nr
Match: XP_022988602.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 324 bits (831), Expect = 1.57e-111
Identity = 163/172 (94.77%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60
           MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSS  L  PFVNCTLTSSIIYRATPA A
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSS--LGKPFVNCTLTSSIIYRATPATA 60

Query: 61  TCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120
           +CVY DPIPEFAEVET+KFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP
Sbjct: 61  SCVYHDPIPEFAEVETRKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120

Query: 121 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172
           GTLLVEPFTNMFIALNERKLPGAPLA RTSLLWAQNYLDHDWNIWISKRGLK
Sbjct: 121 GTLLVEPFTNMFIALNERKLPGAPLATRTSLLWAQNYLDHDWNIWISKRGLK 170

[Close]

BLAST of Csor.00g164270 vs. ExPASy TrEMBL
Match: A0A6J1GYK9 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458359 PE=4 SV=1)

HSP 1 Score: 334 bits (857), Expect = 9.13e-116
Identity = 170/174 (97.70%), Postives = 170/174 (97.70%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60
           MASYSCVLVSAIAVSPAKTTCFNGLNYPTF PSSSS LVNPFVNCTLTSSIIYRATPAPA
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFFPSSSS-LVNPFVNCTLTSSIIYRATPAPA 60

Query: 61  T--CVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYG 120
           T  CVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYG
Sbjct: 61  TATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYG 120

Query: 121 GPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172
           GPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Sbjct: 121 GPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 173

[Close]

BLAST of Csor.00g164270 vs. ExPASy TrEMBL
Match: A0A6J1JDH3 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485796 PE=4 SV=1)

HSP 1 Score: 324 bits (831), Expect = 7.58e-112
Identity = 163/172 (94.77%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60
           MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSS  L  PFVNCTLTSSIIYRATPA A
Sbjct: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSS--LGKPFVNCTLTSSIIYRATPATA 60

Query: 61  TCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120
           +CVY DPIPEFAEVET+KFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP
Sbjct: 61  SCVYHDPIPEFAEVETRKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120

Query: 121 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172
           GTLLVEPFTNMFIALNERKLPGAPLA RTSLLWAQNYLDHDWNIWISKRGLK
Sbjct: 121 GTLLVEPFTNMFIALNERKLPGAPLATRTSLLWAQNYLDHDWNIWISKRGLK 170

[Close]

BLAST of Csor.00g164270 vs. ExPASy TrEMBL
Match: A0A5A7SZ04 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00740 PE=4 SV=1)

HSP 1 Score: 282 bits (721), Expect = 4.45e-95
Identity = 142/172 (82.56%), Postives = 150/172 (87.21%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60
           MA Y C LVSAI VSPAK T FNGL+YPTFS   S   V P VNCTLTSS+IYRATP  A
Sbjct: 1   MAPYGCALVSAIEVSPAKITSFNGLHYPTFSLFPS--FVKPLVNCTLTSSVIYRATPITA 60

Query: 61  TCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120
           + VYP+PIPEFAEVET+KFKEQLSKKLAKDRETFGND DSVV+VCSKIF EYLHVEYGGP
Sbjct: 61  SYVYPEPIPEFAEVETQKFKEQLSKKLAKDRETFGNDFDSVVDVCSKIFGEYLHVEYGGP 120

Query: 121 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172
           GTL+VEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLD+DWNIW SK G K
Sbjct: 121 GTLIVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDNDWNIWNSKGGFK 170

[Close]

BLAST of Csor.00g164270 vs. ExPASy TrEMBL
Match: A0A1S3BEK8 (uncharacterized protein LOC103489034 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489034 PE=4 SV=1)

HSP 1 Score: 282 bits (721), Expect = 4.45e-95
Identity = 142/172 (82.56%), Postives = 150/172 (87.21%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60
           MA Y C LVSAI VSPAK T FNGL+YPTFS   S   V P VNCTLTSS+IYRATP  A
Sbjct: 1   MAPYGCALVSAIEVSPAKITSFNGLHYPTFSLFPS--FVKPLVNCTLTSSVIYRATPITA 60

Query: 61  TCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120
           + VYP+PIPEFAEVET+KFKEQLSKKLAKDRETFGND DSVV+VCSKIF EYLHVEYGGP
Sbjct: 61  SYVYPEPIPEFAEVETQKFKEQLSKKLAKDRETFGNDFDSVVDVCSKIFGEYLHVEYGGP 120

Query: 121 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK 172
           GTL+VEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLD+DWNIW SK G K
Sbjct: 121 GTLIVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDNDWNIWNSKGGFK 170

[Close]

BLAST of Csor.00g164270 vs. ExPASy TrEMBL
Match: A0A6J1DB25 (protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC111019054 PE=4 SV=1)

HSP 1 Score: 256 bits (654), Expect = 5.76e-84
Identity = 131/168 (77.98%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPA 60
           MA + C L+ A AV PAK TCFNGL +PTFSP  S  LV PFVNCT TSS  YRATP P 
Sbjct: 61  MALHGCALLLASAVPPAKITCFNGLLHPTFSPFPS--LVKPFVNCTSTSSFSYRATPLPP 120

Query: 61  TCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGP 120
             VYPDPIPEFAE ET+KF+E LSKKLA+DR TFGNDLD VVEVCSKIF EYLHVEYGGP
Sbjct: 121 KFVYPDPIPEFAEAETRKFREYLSKKLAEDRATFGNDLDFVVEVCSKIFGEYLHVEYGGP 180

Query: 121 GTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISK 168
            TLLVEPFTNMFIALNERKLPGA LAARTSLLWAQN+LD DW IW SK
Sbjct: 181 ETLLVEPFTNMFIALNERKLPGASLAARTSLLWAQNHLDQDWTIWNSK 226

[Close]

BLAST of Csor.00g164270 vs. TAIR 10
Match: AT1G10522.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 0


Query: 3   SYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLT-SSIIYRATPAPAT 62
           S+ C L   I  SPA  +C   +    F      + V  F   +L+    + RA    A 
Sbjct: 21  SFRCAL--PIISSPAAVSC--AIKSTQFFKQRCRTKVRDFSLSSLSRRGFVCRA----AE 80

Query: 63  CVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPG 122
             +PDPIPEFAE ET+KF++ +  KL+K R+ F + +D +V VC++IF  +L  EYGGPG
Sbjct: 81  YKFPDPIPEFAEAETEKFRDHMLNKLSK-RDLFEDSVDEIVGVCTEIFETFLRSEYGGPG 140

Query: 123 TLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW 166
           TLLV PF +M   LNER+LPG P AAR ++ WAQ+++D DW  W
Sbjct: 141 TLLVIPFIDMADTLNERELPGGPQAARAAIKWAQDHVDKDWKEW 175

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BLAST of Csor.00g164270 vs. TAIR 10
Match: AT1G10522.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 0


Query: 3   SYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLT-SSIIYRATPAPAT 62
           S+ C L   I  SPA  +C   +    F      + V  F   +L+    + RA    A 
Sbjct: 21  SFRCAL--PIISSPAAVSC--AIKSTQFFKQRCRTKVRDFSLSSLSRRGFVCRA----AE 80

Query: 63  CVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFSEYLHVEYGGPG 122
             +PDPIPEFAE ET+KF++ +  KL+K R+ F + +D +V VC++IF  +L  EYGGPG
Sbjct: 81  YKFPDPIPEFAEAETEKFRDHMLNKLSK-RDLFEDSVDEIVGVCTEIFETFLRSEYGGPG 140

Query: 123 TLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW 166
           TLLV PF +M   LNER+LPG P AAR ++ WAQ+++D DW  W
Sbjct: 141 TLLVIPFIDMADTLNERELPGGPQAARAAIKWAQDHVDKDWKEW 175

The following BLAST results are available for this feature:

BLAST of Csor.00g164270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIK0	2.1e-27	43.29	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
B6UFC7	2.9e-24	48.54	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Zea mays OX=4577 GN=PRIN2 ...	[more]
Q6H612	1.9e-23	39.64	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Oryza sativa subsp. japoni...	[more]

BLAST of Csor.00g164270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601371.1	1.19e-120	100.00	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrospe...	[more]
XP_022956735.1	1.89e-115	97.70	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita mo...	[more]
XP_023513727.1	1.09e-114	97.11	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X2 [Cucurbita pe...	[more]
XP_023513712.1	1.65e-112	95.45	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita pe...	[more]
XP_022988602.1	1.57e-111	94.77	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita ma...	[more]

BLAST of Csor.00g164270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYK9	9.13e-116	97.70	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita ...	[more]
A0A6J1JDH3	7.58e-112	94.77	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 OS=Cucurbita ...	[more]
A0A5A7SZ04	4.45e-95	82.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BEK8	4.45e-95	82.56	uncharacterized protein LOC103489034 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DB25	5.76e-84	77.98	protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Csor.00g164270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10522.1	1.5e-28	43.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10522.2	1.5e-28	43.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039349	Protein PLASTID REDOX INSENSITIVE 2	PANTHER	PTHR35987	PROTEIN PLASTID REDOX INSENSITIVE 2, CHLOROPLASTIC-RELATED	coord: 1..168
None	No IPR available	PANTHER	PTHR35987:SF3	PROTEIN PLASTID REDOX INSENSITIVE 2, CHLOROPLASTIC-LIKE	coord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g164270.m01	Csor.00g164270.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression