Csor.00g163530 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g163530
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr13: 6361126 .. 6361389 (+)
RNA-Seq ExpressionCsor.00g163530
SyntenyCsor.00g163530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAAGCAATGGCGATGGTATCATCATAGTATTCATCTGGTGGACTGCCGATGGAAAGCGAAAGGACATCGACGCCGTCGTGGATGGCTTGATCAAATCCGTCAAAAATGTCGTCGTCGTAGCAGCCGCCACCGTTGCGGAACGGCTAGCAGACCTTATAGGCAGCGATGCGGGCCTTGGGAGAGCCGCCCTTGGCAGTTCCGATACCGGACCCAAATACGCTAACGCCAGAGACATAGCTGCTGCCGGTCGTCGATAG

mRNA sequence

ATGAAAGGAAGCAATGGCGATGGTATCATCATAGTATTCATCTGGTGGACTGCCGATGGAAAGCGAAAGGACATCGACGCCGTCGTGGATGGCTTGATCAAATCCGTCAAAAATGTCGTCGTCGTAGCAGCCGCCACCGTTGCGGAACGGCTAGCAGACCTTATAGGCAGCGATGCGGGCCTTGGGAGAGCCGCCCTTGGCAGTTCCGATACCGGACCCAAATACGCTAACGCCAGAGACATAGCTGCTGCCGGTCGTCGATAG

Coding sequence (CDS)

ATGAAAGGAAGCAATGGCGATGGTATCATCATAGTATTCATCTGGTGGACTGCCGATGGAAAGCGAAAGGACATCGACGCCGTCGTGGATGGCTTGATCAAATCCGTCAAAAATGTCGTCGTCGTAGCAGCCGCCACCGTTGCGGAACGGCTAGCAGACCTTATAGGCAGCGATGCGGGCCTTGGGAGAGCCGCCCTTGGCAGTTCCGATACCGGACCCAAATACGCTAACGCCAGAGACATAGCTGCTGCCGGTCGTCGATAG

Protein sequence

MKGSNGDGIIIVFIWWTADGKRKDIDAVVDGLIKSVKNVVVVAAATVAERLADLIGSDAGLGRAALGSSDTGPKYANARDIAAAGRR
Homology
[Close]
BLAST of Csor.00g163530 vs. NCBI nr
Match: KAG6583694.1 (hypothetical protein SDJN03_19626, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162 bits (410), Expect = 5.03e-50
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MKGSNGDGIIIVFIWWTADGKRKDIDAVVDGLIKSVKNVVVVAAATVAERLADLIGSDAG 60
          MKGSNGDGIIIVFIWWTADGKRKDIDAVVDGLIKSVKNVVVVAAATVAERLADLIGSDAG
Sbjct: 1  MKGSNGDGIIIVFIWWTADGKRKDIDAVVDGLIKSVKNVVVVAAATVAERLADLIGSDAG 60

Query: 61 LGRAALGSSDTGPKYANARDIAAAGRR 87
          LGRAALGSSDTGPKYANARDIAAAGRR
Sbjct: 61 LGRAALGSSDTGPKYANARDIAAAGRR 87

The following BLAST results are available for this feature:
BLAST of Csor.00g163530 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g163530 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583694.15.03e-50100.00hypothetical protein SDJN03_19626, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g163530 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g163530 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g163530.m01Csor.00g163530.m01mRNA