Csor.00g163260 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACTGCATTGTCTTGCCTTGTGTTCGGTCGCCACAGAAGAAGCTCCGAGGTATCGAAAAAGCCACTGATTTGGCTACAACAGTCGATTCTGCCACTGAATGCTGTAATGACCATCTTCTCCATGATTTTTCTTCTTCAACAAGAACCAGCCTCCAAGTTGGGGAGGTTCGAGATGTTGTTCCATGCCTGAAAGAGCTCGAAAAGCTTCTGGTTTCCTCGAAGATAGTGTACTCGGATGGAGCGGGAGCGAGGAAGGTGAAGATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTAGCAAATGCTAAGAAGTTGCAATCTCGACATAGATTGTTCGGCTATACAAGCCCCCGTAGAGAGTGTCGAAAATGGCGACCGACGTTGTCTGCAATCTCAGAAGAAAAGGGTTTTTGAATGGAGTCTTAGAGGAAAACTTGTGTAGCTTTACAGAGATAATGGAGATTAAGTTGAACTTCAAGCTTCATTTGTAGGAATCTGGCAAGCAAATGATCTTACAAAGGCAAAACTACAAGCGCAGAAAGGAAAGGAGAGAAATTACTAATACAAACTTTTTTTTGGGTTGCAAAACTCAATTTTGAGAGATTTTTTTGGGGTTCTTTTTTGAACGAGATTTGAAAATTCACCTTGTAAAAGGGGCGTCAGTACTACAGGGAGATGAGACCAGCCGTCAACTCCTTCCACCTAGATTTTATATGACCGTTAGGTGAAATTACGACTAGGTCTGCAAACTTGAATCGCCTCAAAATGCAGAGGATGTGACTAATTGTCAAATTCTCTCCACCCGAAAAGTTACATGCTATTTAAGTTGTTGTGTTACCTTTTGCTTATCATATAACATTGTTTTCGGTCTCTCAATCTTGCTTTCAAACTCTTTTTCAAAATCTCTCTGTCCCATTTTCTAAAACCTTCACAAAACGGGACTAGAGGCTTGAGCATACTTTGCCAGATGCCAGACCATAGGCAACGCAATCCTAATTTAGCTTGACTCGCTCAATGCTGAGAGTGTGTGGCATGATTGTAACACTTAGTATCAATGGAAACCCATTATTAATGCCAATCCTTCTTGATTTACAATTCAAAAGCAGAATAATCATACTGTTTATTACTCTAAATTGTTCTTTGATTGAGCAAAGGATTAGATATACACAAGAAGAGAAAAGATGTCATTCTTTTCCTCAATAATACCCAGCAATCCATATGGAAATAAAGTGATTACTTCTCTGAAGGGACAAGGCAACCGACCAATCAAGCAAACAGACAACAATCTGATCAAGCATCCTTGTCCCCACGTTTCCAGTTGTTCCCTGTCTTTTTGACTCATTAACCCCTCTGTCTCCCCCTCTCCTTCAACTCCCCCACAAAAATATCTACTGACTGTACAAGGGTATTTCAGTATTTTCACAATAACGGATTATATTCAAAATAAGAAGCTGATGAACCAAGTTTTGAAACTCATGATCAATACAATGTTTTGCAGTAAAGCATCATCATCACTCATAGCCATTCCTCTCTGTTTCTGTTTCTCAATCTCCATGGACGTTCAAACAAAGGTTCTCCAAAACAAAGACCAAATAACTGTTGTAGCAGCAGTTTCAGTGGTTCTGTCATTGTTTCTAGCATTCTTTTGGCCTCTCTTTGCCTCCACAGCTGCACTCTTGGTCGGAATGATCGCCGCCTTTCGAGGTGGTTTCCAAGTTGGAACCAAAATTCATGGTGTAAGAGCAGCAGGTGAAGGGATCCTAGATTATGTTGCAGGACGACCTGAATATGGCAAAAACCACTATAAGTACCGGTAA ATGGGAAACTGCATTGTCTTGCCTTGTGTTCGGTCGCCACAGAAGAAGCTCCGAGGTATCGAAAAAGCCACTGATTTGGCTACAACAGTCGATTCTGCCACTGAATGCTGTAATGACCATCTTCTCCATGATTTTTCTTCTTCAACAAGAACCAGCCTCCAAGTTGGGGAGGTTCGAGATGTTGTTCCATGCCTGAAAGAGCTCGAAAAGCTTCTGGTTTCCTCGAAGATAGTGTACTCGGATGGAGCGGGAGCGAGGAAGGTGAAGATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTAGCAAATGCTAAGAAGTTGCAATCTCGACATAGATTTAAAGCATCATCATCACTCATAGCCATTCCTCTCTGTTTCTGTTTCTCAATCTCCATGGACGTTCAAACAAAGGTTCTCCAAAACAAAGACCAAATAACTGTTGTAGCAGCAGTTTCAGTGGTTCTGTCATTGTTTCTAGCATTCTTTTGGCCTCTCTTTGCCTCCACAGCTGCACTCTTGGTCGGAATGATCGCCGCCTTTCGAGGTGGTTTCCAAGTTGGAACCAAAATTCATGGTGTAAGAGCAGCAGGTGAAGGGATCCTAGATTATGTTGCAGGACGACCTGAATATGGCAAAAACCACTATAAGTACCGGTAA ATGGGAAACTGCATTGTCTTGCCTTGTGTTCGGTCGCCACAGAAGAAGCTCCGAGGTATCGAAAAAGCCACTGATTTGGCTACAACAGTCGATTCTGCCACTGAATGCTGTAATGACCATCTTCTCCATGATTTTTCTTCTTCAACAAGAACCAGCCTCCAAGTTGGGGAGGTTCGAGATGTTGTTCCATGCCTGAAAGAGCTCGAAAAGCTTCTGGTTTCCTCGAAGATAGTGTACTCGGATGGAGCGGGAGCGAGGAAGGTGAAGATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTAGCAAATGCTAAGAAGTTGCAATCTCGACATAGATTTAAAGCATCATCATCACTCATAGCCATTCCTCTCTGTTTCTGTTTCTCAATCTCCATGGACGTTCAAACAAAGGTTCTCCAAAACAAAGACCAAATAACTGTTGTAGCAGCAGTTTCAGTGGTTCTGTCATTGTTTCTAGCATTCTTTTGGCCTCTCTTTGCCTCCACAGCTGCACTCTTGGTCGGAATGATCGCCGCCTTTCGAGGTGGTTTCCAAGTTGGAACCAAAATTCATGGTGTAAGAGCAGCAGGTGAAGGGATCCTAGATTATGTTGCAGGACGACCTGAATATGGCAAAAACCACTATAAGTACCGGTAA MGNCIVLPCVRSPQKKLRGIEKATDLATTVDSATECCNDHLLHDFSSSTRTSLQVGEVRDVVPCLKELEKLLVSSKIVYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHRFKASSSLIAIPLCFCFSISMDVQTKVLQNKDQITVVAAVSVVLSLFLAFFWPLFASTAALLVGMIAAFRGGFQVGTKIHGVRAAGEGILDYVAGRPEYGKNHYKYR Homology
BLAST of Csor.00g163260 vs. NCBI nr
Match: KAG6583721.1 (hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 420 bits (1079), Expect = 8.60e-148 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Csor.00g163260 vs. NCBI nr
Match: KGN64995.1 (hypothetical protein Csa_022837 [Cucumis sativus]) HSP 1 Score: 171 bits (433), Expect = 1.22e-50 Identity = 93/113 (82.30%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Csor.00g163260 vs. NCBI nr
Match: KAA0042344.1 (hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK15468.1 hypothetical protein E5676_scaffold477G00390 [Cucumis melo var. makuwa]) HSP 1 Score: 166 bits (419), Expect = 2.50e-48 Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Csor.00g163260 vs. NCBI nr
Match: XP_038877793.1 (uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida]) HSP 1 Score: 144 bits (362), Expect = 6.12e-40 Identity = 81/107 (75.70%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Csor.00g163260 vs. NCBI nr
Match: KAA0042343.1 (hypothetical protein E6C27_scaffold795G00410 [Cucumis melo var. makuwa] >TYK15467.1 hypothetical protein E5676_scaffold477G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 122 bits (305), Expect = 6.85e-32 Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of Csor.00g163260 vs. ExPASy TrEMBL
Match: A0A0A0LSY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1) HSP 1 Score: 171 bits (433), Expect = 5.90e-51 Identity = 93/113 (82.30%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Csor.00g163260 vs. ExPASy TrEMBL
Match: A0A5D3CW41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00390 PE=4 SV=1) HSP 1 Score: 166 bits (419), Expect = 1.21e-48 Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of Csor.00g163260 vs. ExPASy TrEMBL
Match: A0A5D3CU44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00380 PE=4 SV=1) HSP 1 Score: 122 bits (305), Expect = 3.32e-32 Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of Csor.00g163260 vs. ExPASy TrEMBL
Match: A0A0A0LYI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173160 PE=4 SV=1) HSP 1 Score: 121 bits (303), Expect = 6.64e-32 Identity = 71/97 (73.20%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Csor.00g163260 vs. ExPASy TrEMBL
Match: A0A2N9EZM9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8190 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.01e-11 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Csor.00g163260 vs. TAIR 10
Match: AT4G16400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06 Identity = 62/223 (27.80%), Postives = 96/223 (43.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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