Csor.00g162590 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g162590
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionGlycine cleavage system H protein
LocationCsor_Chr13: 7312427 .. 7314962 (-)
RNA-Seq ExpressionCsor.00g162590
SyntenyCsor.00g162590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCGAGGTTGCTTTGGGCTTCAAGAGCTGCTTCATTTCTCAGGATCTCAATTCCCTATAGAGGGTTTGCTTCTGGTGAGCCGAATCCACGTTTTTTATGTACTGGTTTTCTTTTTTCTTTCTCAATTTTTGTTAGCCTGATTGTGCGGTAGATGAATTTTTAATGTTGGCGAAAAGAAATGAAACTGATCGATCTGCTTTTCACATTGGAAGATCTCAGTTTCCAGCGATGAGTTTTGTTTATATTTGCCGTTTGTTTGATCGGTGGCATGAATTGCTGGATTTGTTTCGTTTTTTGTATTTGTCTTGTGAATTATTGAGGTGATTATATAATGAATATCTAGATCTTAGGCAGATGGATGAATATCTGCCATTCTGCTTTATGATTTTTTGAATTTCGAACCGGTTTATAAATCTTTTCACCTTCCATTTGAATTATGATGTGATGAATCTCAAACATGATATTCGATTCTACTTTCCTTTTTATCGCCTTCCTTTAATTTGTTCATGTGTTCTTATTTCAATCTTGTTATTTGAACTAACACCAGTGCCTTGGTGACCTTTCTAGCTGCTGATATTGTTAACTACGTAGTTTTCTAGTTTTGATATTAGTTTTCCTTCCTGAATTTATTGTTTTCAATAACTTTCTGTTCGTTTTCTATAACAAAAATGTTGTGATAATTTTCATTTCTGGAAGTTTGCACTTCATATTCTTGATATTTGCATCTACTTAACAATGCAATGAAAGGGATCGGATGTAGAAGTATAAAATCCATATGAGGAGCAAAAGAGGCACATGTACATTTGTATGATAATACATTATATATAGCATAGTCTTATGGAAAGGCAAGCTGTTTCTCAATTATTCGACGTCTTACAAGCGAGCAAAATTGAGAGTATAATGTTTCGTACAGTCACATGATTGCAATGGAAGTCCAATTTTTGCATTTATAGTGCATTGCAATGGAATTATGGAATATCTAGCAGTCAAGTTTATGTTTAAAACTACATGTGAAGGGAAATAACTTGTACCTTGAATTTGTGCAGTTGTGAAGGATTTGAAGTATGCCACCTCTCATGAATGGGTGAAAGTAGAAGGGGATAAAGCAACTATTGGCATAACTGATCATGCTCAAGATCATTTGGGTGATGTTGTCTATGTTGAATTACCAGAGGTTGGAGCCTCTGTTAAACAGGATGGCAGCTTTGGTGCGGTAGAAAGTGTCAAGGCTACCAGTGATATTAACTCTCCTGTGTCGGGGAAAATCGTTGAGGTCAATGACGAGCTCAGCAGTTCCCCTGGTCTGGTGGGTTTCTCGACCTCATATTCTTACTCATTATTAAGTTTATTTTACTTCTTCTTTGCACTTTTAGATACTTTAAGATGGTTTCTATTTAACGAATGACTCGAGTCGTAGTTTCATTACTTGACATGTTTACGTTGGTGATATAAAGCAGTGCACTAGTAGCTCATACTATGCGAGATCTCTCTCGAAATATCTGGTTAATGTAAATGTGTGAAGGTAGATTTGCTGCTCATTTGAGTCATACCAACTCTTCTTGTATCATGAAAATGTTGTCATTGGAGTTTGCTTTCTTTAGCCATATTCAGGAGACAACCTGCCAATACCTTTGGACGTTTTCTTAACAAATTACCGTTTCTTTAATTATCTTCCCCTTTGCTTCTACTGAAAACTTTCTAGTCATTTTGGGTGAAATCTCACATCGGTTGGAGAGGGGAACGAGTGCCAGTGAGAACGTTGGGCCTCAAAGGGGGGAGGGGGGGTGGATTGTGATATATCACATCGGCTAGAGAGGGGAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAACCTTGAGGTTGACGACGATACGTAACGGGCCAAAGTAGACAATATCTGCTAATGGTGGGCTTGAGCTATTGCAAATGGTATTAGAGCCAAACACCGGGTAGTTTGCCAGGTAGGATGCTAGATGCTAGGGCCCCGAAGGGGGTGAATGATGAGATCCCACATTGGTTGGAGAGGGGAATGATCCCACATTGGTTGGAGGGGGTGGATTGTGAGATCCCACATCAATTAGAGAGTGAAACGAGTGCCAGCGAGTACGCTGGCCCCAAATGGGAGTGGATTATGATATCTCACAAAACATTTTTTATAAGAGTGTAGAAACCTCTCTCTAACAGATGCGTTTTAAAACCGTGAGGCTGACAGCGACACGTAACGGACTAAGACGAACAATATTTGGTAGCAGCGGGCTTGGGCTCAATGCATACACAGCAATTCCTTTGTTTATAGCTTTTTGTTTTGTTTTGTGTTGTATATGAGTATGAGTATGAGTGATTTGGCTGTTCTTGATGAATATGTATGTGTGTTAATAATGTAGGTGAACTCAAGCCCATATGAGAATGGATGGATAATTAAGGTGGAGGTTAGTGACAGTAATGAACTGAAGAATTTGATGGACTCTGAGCAGTACACCAAGTTCTGTGAAGAAGAAGATCATTGA

mRNA sequence

ATGGCGTCGAGGTTGCTTTGGGCTTCAAGAGCTGCTTCATTTCTCAGGATCTCAATTCCCTATAGAGGGTTTGCTTCTGTTGTGAAGGATTTGAAGTATGCCACCTCTCATGAATGGGTGAAAGTAGAAGGGGATAAAGCAACTATTGGCATAACTGATCATGCTCAAGATCATTTGGGTGATGTTGTCTATGTTGAATTACCAGAGGTTGGAGCCTCTGTTAAACAGGATGGCAGCTTTGGTGCGGTAGAAAGTGTCAAGGCTACCAGTGATATTAACTCTCCTGTGTCGGGGAAAATCGTTGAGGTCAATGACGAGCTCAGCAGTTCCCCTGGTCTGGTGAACTCAAGCCCATATGAGAATGGATGGATAATTAAGGTGGAGGTTAGTGACAGTAATGAACTGAAGAATTTGATGGACTCTGAGCAGTACACCAAGTTCTGTGAAGAAGAAGATCATTGA

Coding sequence (CDS)

ATGGCGTCGAGGTTGCTTTGGGCTTCAAGAGCTGCTTCATTTCTCAGGATCTCAATTCCCTATAGAGGGTTTGCTTCTGTTGTGAAGGATTTGAAGTATGCCACCTCTCATGAATGGGTGAAAGTAGAAGGGGATAAAGCAACTATTGGCATAACTGATCATGCTCAAGATCATTTGGGTGATGTTGTCTATGTTGAATTACCAGAGGTTGGAGCCTCTGTTAAACAGGATGGCAGCTTTGGTGCGGTAGAAAGTGTCAAGGCTACCAGTGATATTAACTCTCCTGTGTCGGGGAAAATCGTTGAGGTCAATGACGAGCTCAGCAGTTCCCCTGGTCTGGTGAACTCAAGCCCATATGAGAATGGATGGATAATTAAGGTGGAGGTTAGTGACAGTAATGAACTGAAGAATTTGATGGACTCTGAGCAGTACACCAAGTTCTGTGAAGAAGAAGATCATTGA

Protein sequence

MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLGDVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYENGWIIKVEVSDSNELKNLMDSEQYTKFCEEEDH
Homology
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BLAST of Csor.00g162590 vs. ExPASy Swiss-Prot
Match: O82179 (Glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH2 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.1e-62
Identity = 120/153 (78.43%), Postives = 135/153 (88.24%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVV-KDLKYATSHEWVKVEGDKATIGITDHAQDHL 60
           MA RL WASR AS LRIS+  RGF+SVV KDLKYA SHEWVK++G+KAT GITDHAQDHL
Sbjct: 1   MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHL 60

Query: 61  GDVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPY 120
           GDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK+VEVN+EL+ SPGLVNSSPY
Sbjct: 61  GDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPY 120

Query: 121 ENGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 153
           E GWIIKVE+SD+ E + LMDS++Y+KFCEEED
Sbjct: 121 EQGWIIKVELSDAGEAEKLMDSDKYSKFCEEED 153

[Close]
BLAST of Csor.00g162590 vs. ExPASy Swiss-Prot
Match: Q39732 (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-48
Identity = 99/155 (63.87%), Postives = 124/155 (80.00%), Query Frame = 0 

Query: 6   LWASRAASFLRISI---PY-----RGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQD 65
           +WAS  A+ LR+S    P+     R F+SV+  LKYA SHEWVK EG  ATIGITDHAQD
Sbjct: 5   MWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQD 64

Query: 66  HLGDVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSS 125
           HLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+IVEVN +LS +PGL+NSS
Sbjct: 65  HLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSS 124

Query: 126 PYENGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 153
           PYE+GW+IKV+ S+ +EL +LM +++YTKFCEEED
Sbjct: 125 PYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEED 159

[Close]
BLAST of Csor.00g162590 vs. ExPASy Swiss-Prot
Match: P49359 (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-48
Identity = 99/155 (63.87%), Postives = 124/155 (80.00%), Query Frame = 0 

Query: 6   LWASRAASFLRISI---PY-----RGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQD 65
           +WAS  A+ LR+S    P+     R F+SV+  LKYA SHEWVK EG  ATIGITDHAQD
Sbjct: 5   IWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQD 64

Query: 66  HLGDVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSS 125
           HLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+IVEVN +LS +PGL+NSS
Sbjct: 65  HLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSS 124

Query: 126 PYENGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 153
           PYE+GW+IKV+ S+ +EL +LM +++YTKFCEEED
Sbjct: 125 PYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEED 159

[Close]
BLAST of Csor.00g162590 vs. ExPASy Swiss-Prot
Match: A2Z9B8 (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 9.6e-48
Identity = 98/158 (62.03%), Postives = 121/158 (76.58%), Query Frame = 0 

Query: 6   LWASRAASFLRISIP-----------YRGFASVVKDLKYATSHEWVKVEGDKATIGITDH 65
           LWAS AA+ L+IS              R F++V+  LKY++SHEWVK +G  ATIGITDH
Sbjct: 5   LWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDH 64

Query: 66  AQDHLGDVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLV 125
           AQ HLG+VV+VELPE GA V Q G+FG VESVKATSDINSP+SG++VEVND+LS +PGL+
Sbjct: 65  AQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLI 124

Query: 126 NSSPYENGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 153
           NSSPYE+GW+IKV+ S  +EL  L+D  +YTK CEEED
Sbjct: 125 NSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEED 162

[Close]
BLAST of Csor.00g162590 vs. ExPASy Swiss-Prot
Match: A3C6G9 (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GDCSH PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 9.6e-48
Identity = 98/158 (62.03%), Postives = 121/158 (76.58%), Query Frame = 0 

Query: 6   LWASRAASFLRISIP-----------YRGFASVVKDLKYATSHEWVKVEGDKATIGITDH 65
           LWAS AA+ L+IS              R F++V+  LKY++SHEWVK +G  ATIGITDH
Sbjct: 5   LWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDH 64

Query: 66  AQDHLGDVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLV 125
           AQ HLG+VV+VELPE GA V Q G+FG VESVKATSDINSP+SG++VEVND+LS +PGL+
Sbjct: 65  AQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLI 124

Query: 126 NSSPYENGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 153
           NSSPYE+GW+IKV+ S  +EL  L+D  +YTK CEEED
Sbjct: 125 NSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEED 162

[Close]
BLAST of Csor.00g162590 vs. NCBI nr
Match: KAG6583787.1 (Glycine cleavage system H protein 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305 bits (780), Expect = 2.39e-104
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEEDH 153
           NGWIIKVEVSDSNELKNLMDSEQYTKFCEEEDH
Sbjct: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEEDH 153

[Close]
BLAST of Csor.00g162590 vs. NCBI nr
Match: XP_022927059.1 (glycine cleavage system H protein 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 300 bits (767), Expect = 2.46e-102
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPE+GASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEIGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 152
           NGWIIKVEVSDSNELKNLMDSEQY+KFCEEED
Sbjct: 121 NGWIIKVEVSDSNELKNLMDSEQYSKFCEEED 152

[Close]
BLAST of Csor.00g162590 vs. NCBI nr
Match: XP_023520355.1 (glycine cleavage system H protein 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298 bits (763), Expect = 1.00e-101
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRLLWASRAASFLRIS PYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASFLRISTPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 152
           NGWIIKVEVSDSNELKNLMDSEQY+KFCEEED
Sbjct: 121 NGWIIKVEVSDSNELKNLMDSEQYSKFCEEED 152

[Close]
BLAST of Csor.00g162590 vs. NCBI nr
Match: XP_023520356.1 (glycine cleavage system H protein 2, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023520357.1 glycine cleavage system H protein 2, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023520358.1 glycine cleavage system H protein 2, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6583789.1 Glycine cleavage system H protein 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295 bits (755), Expect = 1.56e-100
Identity = 147/153 (96.08%), Postives = 150/153 (98.04%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRL+WASR AS+LRISIP+RGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG
Sbjct: 1   MASRLVWASRVASYLRISIPHRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPEVG SVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSP LVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPALVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEEDH 153
           NGWIIKVEVSDSNELKNLMDSEQYTKFCEEEDH
Sbjct: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEEDH 153

[Close]
BLAST of Csor.00g162590 vs. NCBI nr
Match: XP_023001629.1 (glycine cleavage system H protein 2, mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 291 bits (746), Expect = 3.67e-99
Identity = 145/153 (94.77%), Postives = 150/153 (98.04%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRL+WASR AS+LRISIP+RGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG
Sbjct: 1   MASRLVWASRVASYLRISIPHRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPEVG SVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSP LVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPALVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEEDH 153
           NGWIIKVEVSDS+ELKNLMDSEQY+KFCEEEDH
Sbjct: 121 NGWIIKVEVSDSDELKNLMDSEQYSKFCEEEDH 153

[Close]
BLAST of Csor.00g162590 vs. ExPASy TrEMBL
Match: A0A6J1EGY1 (Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111433999 PE=3 SV=1)

HSP 1 Score: 300 bits (767), Expect = 1.19e-102
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPE+GASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEIGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 152
           NGWIIKVEVSDSNELKNLMDSEQY+KFCEEED
Sbjct: 121 NGWIIKVEVSDSNELKNLMDSEQYSKFCEEED 152

[Close]
BLAST of Csor.00g162590 vs. ExPASy TrEMBL
Match: A0A6J1KN98 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111495697 PE=3 SV=1)

HSP 1 Score: 291 bits (746), Expect = 1.78e-99
Identity = 145/153 (94.77%), Postives = 150/153 (98.04%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRL+WASR AS+LRISIP+RGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG
Sbjct: 1   MASRLVWASRVASYLRISIPHRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPEVG SVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSP LVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPALVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEEDH 153
           NGWIIKVEVSDS+ELKNLMDSEQY+KFCEEEDH
Sbjct: 121 NGWIIKVEVSDSDELKNLMDSEQYSKFCEEEDH 153

[Close]
BLAST of Csor.00g162590 vs. ExPASy TrEMBL
Match: A0A6J1KR20 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111495696 PE=3 SV=1)

HSP 1 Score: 291 bits (746), Expect = 1.90e-99
Identity = 146/152 (96.05%), Postives = 150/152 (98.68%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRLLWASRAAS+LRISIPYRGFASVVKDLKYATSHEWVK+EGDKATIGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASYLRISIPYRGFASVVKDLKYATSHEWVKIEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 152
           NGWIIKVEVSDS+EL  LMDSEQY+KFCEEED
Sbjct: 121 NGWIIKVEVSDSDELGRLMDSEQYSKFCEEED 152

[Close]
BLAST of Csor.00g162590 vs. ExPASy TrEMBL
Match: A0A5D3CLV3 (Glycine cleavage system H protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00460 PE=3 SV=1)

HSP 1 Score: 290 bits (742), Expect = 7.75e-99
Identity = 143/152 (94.08%), Postives = 150/152 (98.68%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRL+WASRAAS+LRISIP+RGFASVVKDLKYATSHEWVKVEGDKAT+GITDHAQDHLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPEVG SVKQDGSFGAVESVKATSDINSPVSGKI+EVN+ELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 152
           NGWIIKVEVSDS ELKNLMDSEQY+KFCEEED
Sbjct: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEED 152

[Close]
BLAST of Csor.00g162590 vs. ExPASy TrEMBL
Match: A0A1S3C983 (Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103498256 PE=3 SV=1)

HSP 1 Score: 290 bits (742), Expect = 7.75e-99
Identity = 143/152 (94.08%), Postives = 150/152 (98.68%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60
           MASRL+WASRAAS+LRISIP+RGFASVVKDLKYATSHEWVKVEGDKAT+GITDHAQDHLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120
           DVVYVELPEVG SVKQDGSFGAVESVKATSDINSPVSGKI+EVN+ELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 152
           NGWIIKVEVSDS ELKNLMDSEQY+KFCEEED
Sbjct: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEED 152

[Close]
BLAST of Csor.00g162590 vs. TAIR 10
Match: AT2G35120.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 2.2e-63
Identity = 120/153 (78.43%), Postives = 135/153 (88.24%), Query Frame = 0 

Query: 1   MASRLLWASRAASFLRISIPYRGFASVV-KDLKYATSHEWVKVEGDKATIGITDHAQDHL 60
           MA RL WASR AS LRIS+  RGF+SVV KDLKYA SHEWVK++G+KAT GITDHAQDHL
Sbjct: 1   MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHL 60

Query: 61  GDVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPY 120
           GDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK+VEVN+EL+ SPGLVNSSPY
Sbjct: 61  GDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPY 120

Query: 121 ENGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 153
           E GWIIKVE+SD+ E + LMDS++Y+KFCEEED
Sbjct: 121 EQGWIIKVELSDAGEAEKLMDSDKYSKFCEEED 153

[Close]
BLAST of Csor.00g162590 vs. TAIR 10
Match: AT1G32470.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 2.2e-47
Identity = 96/159 (60.38%), Postives = 123/159 (77.36%), Query Frame = 0 

Query: 6   LWASRAASFLRIS--------IP----YRGFASVVKDLKYATSHEWVKVEGDKATIGITD 65
           +WAS  A+ L++S        +P     R F+SV++ LKYA SHEWVK EG  ATIGITD
Sbjct: 5   MWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATIGITD 64

Query: 66  HAQDHLGDVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGL 125
           HAQDHLG+VV+VELPE  +SV ++ SFGAVESVKATS+I SP+SG+++EVN +L+ SPGL
Sbjct: 65  HAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTESPGL 124

Query: 126 VNSSPYENGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 153
           +NSSPYE+GW+IKV+ S   EL+ LM  ++YTKFCEEED
Sbjct: 125 INSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEED 163

[Close]
BLAST of Csor.00g162590 vs. TAIR 10
Match: AT2G35370.1 (glycine decarboxylase complex H )

HSP 1 Score: 182.6 bits (462), Expect = 2.4e-46
Identity = 95/158 (60.13%), Postives = 122/158 (77.22%), Query Frame = 0 

Query: 6   LWASRAASFLRIS--------IPY---RGFASVVKDLKYATSHEWVKVEGDKATIGITDH 65
           +WAS  A+ L++S         P+   R F++V++ LKYA SHEWVK EG  ATIGIT H
Sbjct: 5   MWASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIGITAH 64

Query: 66  AQDHLGDVVYVELPEVGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLV 125
           AQDHLG+VV+VELPE   SV ++ SFGAVESVKATS+I SP+SG+I+EVN +L+ SPGL+
Sbjct: 65  AQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTESPGLI 124

Query: 126 NSSPYENGWIIKVEVSDSNELKNLMDSEQYTKFCEEED 153
           NSSPYE+GW+IKV+ S   EL++LM  ++YTKFCEEED
Sbjct: 125 NSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEED 162

The following BLAST results are available for this feature:
BLAST of Csor.00g162590 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O821793.1e-6278.43Glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
Q397321.5e-4863.87Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN... [more]
P493591.5e-4863.87Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN... [more]
A2Z9B89.6e-4862.03Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. indica O... [more]
A3C6G99.6e-4862.03Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica... [more]
BLAST of Csor.00g162590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583787.12.39e-104100.00Glycine cleavage system H protein 2, mitochondrial, partial [Cucurbita argyrospe... [more]
XP_022927059.12.46e-10298.68glycine cleavage system H protein 2, mitochondrial-like [Cucurbita moschata][more]
XP_023520355.11.00e-10198.68glycine cleavage system H protein 2, mitochondrial [Cucurbita pepo subsp. pepo][more]
XP_023520356.11.56e-10096.08glycine cleavage system H protein 2, mitochondrial-like [Cucurbita pepo subsp. p... [more]
XP_023001629.13.67e-9994.77glycine cleavage system H protein 2, mitochondrial-like isoform X2 [Cucurbita ma... [more]
BLAST of Csor.00g162590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EGY11.19e-10298.68Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111433999 ... [more]
A0A6J1KN981.78e-9994.77Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111495697 PE... [more]
A0A6J1KR201.90e-9996.05Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111495696 PE... [more]
A0A5D3CLV37.75e-9994.08Glycine cleavage system H protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3C9837.75e-9994.08Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103498256 PE=3 S... [more]
BLAST of Csor.00g162590 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G35120.12.2e-6378.43Single hybrid motif superfamily protein [more]
AT1G32470.12.2e-4760.38Single hybrid motif superfamily protein [more]
AT2G35370.12.4e-4660.13glycine decarboxylase complex H [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017453Glycine cleavage system H-protein, subgroupTIGRFAMTIGR00527TIGR00527coord: 28..152
e-value: 5.0E-53
score: 176.6
IPR033753Glycine cleavage system H-protein/SimiatePFAMPF01597GCV_Hcoord: 31..150
e-value: 3.3E-50
score: 169.1
IPR033753Glycine cleavage system H-protein/SimiateCDDcd06848GCS_Hcoord: 33..127
e-value: 1.95824E-51
score: 157.31
NoneNo IPR availableGENE3D2.40.50.100coord: 21..151
e-value: 5.4E-59
score: 199.5
NoneNo IPR availablePANTHERPTHR11715:SF31GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 5..152
IPR002930Glycine cleavage system H-proteinPANTHERPTHR11715GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 5..152
IPR002930Glycine cleavage system H-proteinHAMAPMF_00272GcvHcoord: 28..149
score: 39.536156
IPR0030162-oxo acid dehydrogenase, lipoyl-binding sitePROSITEPS00189LIPOYLcoord: 71..100
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 46..128
score: 29.873402
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 27..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g162590.m01Csor.00g162590.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019464 glycine decarboxylation via glycine cleavage system
biological_process GO:0009249 protein lipoylation
cellular_component GO:0005960 glycine cleavage complex
cellular_component GO:0005739 mitochondrion