Csor.00g162550 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTGTTCTTGAAGAATGCCGGAGAAAAGCAGAGCTCTCTCTGGTGCTGAAAGACCCGGGGGGATTTCTTGTTGCCGAAGAAGGCTTCTGGGTACGACGCCTCGACGGGCCCTTGGCTTCTCTCTGGGCCCTTGGCTTCTCTCTGGGCCTTGCGGCTCTCGGTCTTTATGTTCTTTTACAAAAGCTTTGGCCGAATTAATAAAATTAATAAAAATAACTCTAAAAATATTCTTAAATTTTTTAATATTTTGTTTCAAAATTTCAAAATATTTAAAAATTATTCATCAAATTTTAAAAATAAAAGTAACACAATCTTTATTTAAAAAATTATTATCGTTAATATATGGACGAAAACTATCAATCTAAGATTCATAGATCATCTCCAAACTTTATTAATTATTATTTTTTATTTCTAAAAAATCATCGTGTTGGTCCCACCTGATTTGTGAAAGTTTATTTGAGGTGGCGTCTCAACTCCAGGCACTGGATACCGTTGTGAAGCCAAATGTGATATTAAGTTCATGCACAATAAGTCGACGAACCTAAAATATAGAATTAATTTGTGGTTATTTGTTGGGTCAAAGATGTGATGAGAGCCCTAATGAGTATATTTATTCTTTTTCAAATTCTTAAGGATACTGGTCGAGACGATGGGGTATTTGGGAGCTCAGTAGTCATAGAGAAATGTCGGCCTGAAACATATCTAGGCTAAGTCGCTTGAGCGCGAGCAATTTTCGTCGTCGACACAACACCCACCATCGGTTGAGGTCGAGGAGATGCCTCACGCAGTTGAGGTCGAGGAGATACTCAACTACGCAGTTTGTAGTGACCAAGTTTTTATTAATTTAGCCTAAAAACTTGGTCGAGTCATCCAAATTTTTCAACGTTACTTAACGAAGTGGTATTGGGCTTGGGCCAATTGTCGAACCATGTCATTTAATCCGTTTCATTTTTGGGCTGGGCCTTAATGAATATGGGCCTTATGAACCGGGCGAAAATGGCGGAAATCGGAAACCCGTGGACTACAAAAAGCAACCCGAACAAAACCCGGCACCATCATCTTGCTTCGCAAGAAAGGGTCTGCTTAAAGCTTACTGAACAAAGCTGTTTGTTGCTGCTTCTTCTTCTTCATTTTTCTTCAGTGTTGCAGGCAAGTAGATCTCTCTCTCCTCCTAATACTTTCTTGATTTTTCGTGTTCGAATTTTCATCGTTTAGGAATTTTGGCGCTTTTGATATGATTCTGATTTCTCAGTGTTCGTGCAGAATCTAGCGAGTTTCTTCAATTGAATCGCAAAATGTTTCTGACCAGGTGATGATCTAGTGCATTCTTTGCTGTGGCATTTTCGTTCTCTTTCTATTTTTGTTTTGTTTCTATTGTTTAATTTTATGTCTCTCTCGTTTTGTCCTTCTGATTCTGGGGTTTTTCAGGACTGAGTATGATAGGGGTGTGAATACCTTCTCTCCTGAAGGTCGATTGTTCCAGGTTGAGTACGCCATTGAAGCTATTAAGGTATTCTATTGTTTTCCTTCCCTTTCGTTCTCTCATTTCTGGGCTTTTTCCATTAAATTTCGTGTTGAAGTTTGTGAGATTCGGAGAAGGGTGGTGAAGTTGAGTGAAAAAACCTTGAATGACTTTTTTTTTTGTCCATTTTGTTGAATCAACTGATTTTCCTTAATTTTTGCAGCTTGGTTCGACTGCAATTGGTTTGAAAACAAAGGAAGGCGTTGTGCTTGCTGTTGAGAAACGTATTACATCCCCACTACTGGTCTGCTCCTTTGCCTTAGAATTTCTTAATTCGTTGCTATTGGTTGTCATTGTCTATTGCATATATTATCATATTCAGCTCAAGTTAGATGCCTAGCAGTTCTACGTAGGCATCGTAATTGATATGGTTGCCTATGGGATATATACAGTTATATACAAGCTCAACTTAAATATCTTGCCACCAATCTTGAAACTGAAATTTGTACTCTAATTTAACTGAAGTTTAGCTATTGATCCATCTTCTTTTTTGTTTGGATTTCAAGGCAGCCTTTTTTTTCCCCTTCAATTGTGAGGTTGACATTTTTGGAACTTTTATTTAGGAACCAAGTAGCGTGGAAAAAATCATGGAAATTGATGAGCATATAGGATGTGCAATGAGTGGATTAATTGCTGATGCTCACACCCTTGTTGAACATGCTCGAGTTGAGACCCAGGTGCTGTTGATGCTCTTGCCTTGCATCTATAGTTTATATCTTTTAAAGGCAAGCTATTGAATTTTGAACTTCATGTTTTGCAGAACCATCGGTTCTCATATGGTGAACCAATGACTGTGGAGTCTACAACTCAAGCTCTTTGTGATCTAGCCCTAAGATTTGGTGAAGGCGATGAGGAGTCCATGGTTATTACTGCAACTTTTCTCTTTTCATTTTACTCCATCTCTTCTCCACTTCCTGTTGAATTAATCTTGACTCACTGTAAAATGGCAATGGCTTAACAACATTTATTTTGTTAATTAGCATCTATCTAAAATATAACCTTCACATGTATTATTTGATTAGGGAATTATTTCACGCTTAATCTTTTGGATGTAAAAAATAATGAGTTCTTGAATAAGTGACTTTCTGATGTTATTGACATGAATTTATGCAGATATTAGTATACTTTTCCAGTGATTTTATTTAGATGATATCCTGTCCTAGTAAAATGTAGGATGGTTGTATAGTGTATTTTGCATAACCATCTTCCATATTTGAAAGAATTATATCATTTCGACTTTTCGCAATGTTGAAAAAGGAAACATGTTGTCACTAGTTTACTTGCTAATATAATACATTTTTTTCTCTCTTTACAGTCTCGACCATTTGGTGTAGCTCTTCTCATTGCCGGCCATGATGAGAAGGGGCCCAGCTTGTAAGTTAAACACATAATGAGCAAACTGATTTATATGACTAACTGTTATTTCACTGCAAACTGATATATGTGACTAGCTGTTATCTCACTGCATTCTGTATTTTGTACCACCACGTCCACGGCCCAAGTGATGGCTGTGGGTGTGTTTGAACTCTTTTTTTTTGCATCCTTCTATTGGGATGGCATGGAAAAGGGGTTGCATCGTTTTTTATATTTCATACTTTTAGGTATTTTTCTCATGTGTTTCATACTTGTAGTAATCATACACCCAGGGAAAAAGTTAAAATCGCAACTTTTGAAATTTATGCGATACTGCCTGATTAGTTGCATTCAAACACCTTTGAGCTGAGAGACATGTAGTGTAGAAAAACGATATAAGTTGGAGAATTAAATGGTCTTCCCCAACCCTAATGACAGAGGAGATTATAATTTAGAAAGATTCCAATCAACCGTAAGTCAATAAAAAGATATCATCACACTGCTACTCAACGTACCCTCAAAGAGATTATAAATTCACTTGGGTCATCAAATGATACACTTTATCATTTTTATCCCAATGTTCCTCATATTTTTCTCTTCTATAGTTCAACCACCATCAAAATAATCAAGATTGACTCAGAGTTAGCGTTTCTATGTTTTCTTTTGAGATAAGGACCAAAAAGGCAGTTGAAGCAAAAATCATTTGTATGCCAGTTTCTGTCTCATGCATGCATCTTCAAGCTTTACGAAACAAGTTTTGGTTCGGCACTCATGTCTAATTTTAAGTTCTCTCGATGATTAGAACATTAAATCCTCTGCTGAGACCACTGCATTCATTTGCTTTTTAATGCCAAATAACTTTTTTTTAATCATTGTTAGCTATTACTTGTTTGCATCATTGATGCAATTTTTGATGTAGCGTTCATTTTTAGTTGTGTAGAAGGCTGCTAGCATTGTATACTGTTTTAATAATATTCATATCAGAACGTTGTGCATCATCAGGATTCAGGAATATGCATTATGGATTAAGTAAAATTCCCTCCGTAATATGCTGGCAGAAATGATGTTTACCCCTTAGTTTTTAACCTGATAATCTGTGGTATGCAGATTCTACACTGATCCATCTGGCACTTTCTGGCAATGCAATGCTAAAGCTATCGGTTCAGGTTCTGAAGGTGCGGACAGTTCTCTGCAAGAGCAGTACAATAAGGTATGTTTTCTACTATATTGGTGTCAGATATAACTGAATGCTATGCTGGTGGACGGCTTTTCCTTTTTCTTCCATTTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAGACAGATGAAGCGCACCACAACCTCATATTTGTCCAATCATAGGATTTTGGTAGCTATTCTCGTTAAAATATAAAATTTTAGATAGATATGTTGTCACTAAGAGTGAACGTTTTATTTACAAGTAATATGAGGTATGGTGTTTTTGAAGTTAAAATGTGAAAAGTTGAGATACATACATATATACATATATACGTACGTGATATGTACAAGTCAAATGAGATATGAGATATATCTAATGCTTTAGAGTTTATATATAAAACAGCCATTTCTCTGCACTCTTTATTATTGTAAGTATTTGAGATAAATGTTACCATTTTTCACTAAACAAAGAGCGCAACAAGCGTCAGCTAAACGTTTAGGACTTTTACACCCATGCTTAAGCAACTACATATCTCAAAGTTAGAACACCATATGTTTTTGCGACTTATATTAAATGGACTTCTTGGTTTTGTTCAATTGAGCGCAGGACCTAACTCTTAAAGAAGCTGAAACCATAGCACTGTCCATTCTGAAGCAAGTTATGGAAGAGAAGGTGAATAAATAATAGTGCATTTTTAAACATAGGAATGAGATATCAAGAAGCATTGCACTTCTAACATTAACTTTTGCCATCTAATAATCTGTGGATGAAACTGCGTCCCTCCAATTTCAGGTGACTCCCAACAATGTCGATATCGCGAAGGTGGCTCCGACATATCATCTGTACACCCCTGCAGAGGTGGAGGCAGTCATTAGCCGGCTATGA ATGGAAGTGTTCTTGAAGAATGCCGGAGAAAAGCAGAGCTCTCTCTGTGTTGCAGAATCTAGCGAGTTTCTTCAATTGAATCGCAAAATGTTTCTGACCAGGACTGAGTATGATAGGGGTGTGAATACCTTCTCTCCTGAAGGTCGATTGTTCCAGGTTGAGTACGCCATTGAAGCTATTAAGCTTGGTTCGACTGCAATTGGTTTGAAAACAAAGGAAGGCGTTGTGCTTGCTGTTGAGAAACGTATTACATCCCCACTACTGGAACCAAGTAGCGTGGAAAAAATCATGGAAATTGATGAGCATATAGGATGTGCAATGAGTGGATTAATTGCTGATGCTCACACCCTTGTTGAACATGCTCGAGTTGAGACCCAGAACCATCGGTTCTCATATGGTGAACCAATGACTGTGGAGTCTACAACTCAAGCTCTTTGTGATCTAGCCCTAAGATTTGGTGAAGGCGATGAGGAGTCCATGTCTCGACCATTTGGTGTAGCTCTTCTCATTGCCGGCCATGATGAGAAGGGGCCCAGCTTATTCTACACTGATCCATCTGGCACTTTCTGGCAATGCAATGCTAAAGCTATCGGTTCAGGTTCTGAAGGTGCGGACAGTTCTCTGCAAGAGCAGTACAATAAGGACCTAACTCTTAAAGAAGCTGAAACCATAGCACTGTCCATTCTGAAGCAAGTTATGGAAGAGAAGGTGACTCCCAACAATGTCGATATCGCGAAGGTGGCTCCGACATATCATCTGTACACCCCTGCAGAGGTGGAGGCAGTCATTAGCCGGCTATGA ATGGAAGTGTTCTTGAAGAATGCCGGAGAAAAGCAGAGCTCTCTCTGTGTTGCAGAATCTAGCGAGTTTCTTCAATTGAATCGCAAAATGTTTCTGACCAGGACTGAGTATGATAGGGGTGTGAATACCTTCTCTCCTGAAGGTCGATTGTTCCAGGTTGAGTACGCCATTGAAGCTATTAAGCTTGGTTCGACTGCAATTGGTTTGAAAACAAAGGAAGGCGTTGTGCTTGCTGTTGAGAAACGTATTACATCCCCACTACTGGAACCAAGTAGCGTGGAAAAAATCATGGAAATTGATGAGCATATAGGATGTGCAATGAGTGGATTAATTGCTGATGCTCACACCCTTGTTGAACATGCTCGAGTTGAGACCCAGAACCATCGGTTCTCATATGGTGAACCAATGACTGTGGAGTCTACAACTCAAGCTCTTTGTGATCTAGCCCTAAGATTTGGTGAAGGCGATGAGGAGTCCATGTCTCGACCATTTGGTGTAGCTCTTCTCATTGCCGGCCATGATGAGAAGGGGCCCAGCTTATTCTACACTGATCCATCTGGCACTTTCTGGCAATGCAATGCTAAAGCTATCGGTTCAGGTTCTGAAGGTGCGGACAGTTCTCTGCAAGAGCAGTACAATAAGGACCTAACTCTTAAAGAAGCTGAAACCATAGCACTGTCCATTCTGAAGCAAGTTATGGAAGAGAAGGTGACTCCCAACAATGTCGATATCGCGAAGGTGGCTCCGACATATCATCTGTACACCCCTGCAGAGGTGGAGGCAGTCATTAGCCGGCTATGA MEVFLKNAGEKQSSLCVAESSEFLQLNRKMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADAHTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVALLIAGHDEKGPSLFYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLKEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPAEVEAVISRL Homology
BLAST of Csor.00g162550 vs. ExPASy Swiss-Prot
Match: Q9M4T8 (Proteasome subunit alpha type-5 OS=Glycine max OX=3847 GN=PAE1 PE=2 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 1.1e-126 Identity = 229/237 (96.62%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of Csor.00g162550 vs. ExPASy Swiss-Prot
Match: Q9LSU1 (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica OX=39947 GN=PAE1 PE=2 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 1.5e-125 Identity = 225/237 (94.94%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of Csor.00g162550 vs. ExPASy Swiss-Prot
Match: Q42134 (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana OX=3702 GN=PAE2 PE=1 SV=2) HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-124 Identity = 224/237 (94.51%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of Csor.00g162550 vs. ExPASy Swiss-Prot
Match: O81149 (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana OX=3702 GN=PAE1 PE=1 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 4.9e-124 Identity = 223/237 (94.09%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of Csor.00g162550 vs. ExPASy Swiss-Prot
Match: Q5E987 (Proteasome subunit alpha type-5 OS=Bos taurus OX=9913 GN=PSMA5 PE=1 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 6.7e-89 Identity = 171/238 (71.85%), Postives = 199/238 (83.61%), Query Frame = 0
BLAST of Csor.00g162550 vs. NCBI nr
Match: KAG6583791.1 (Proteasome subunit alpha type-5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 521 bits (1342), Expect = 2.77e-186 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
BLAST of Csor.00g162550 vs. NCBI nr
Match: XP_022927055.1 (proteasome subunit alpha type-5 [Cucurbita moschata] >XP_022927056.1 proteasome subunit alpha type-5 [Cucurbita moschata] >XP_023001599.1 proteasome subunit alpha type-5 [Cucurbita maxima] >XP_023001600.1 proteasome subunit alpha type-5 [Cucurbita maxima] >XP_023520352.1 proteasome subunit alpha type-5 [Cucurbita pepo subsp. pepo] >XP_023520353.1 proteasome subunit alpha type-5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 466 bits (1200), Expect = 4.25e-165 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Csor.00g162550 vs. NCBI nr
Match: KAG7019414.1 (Proteasome subunit alpha type-5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 465 bits (1197), Expect = 1.22e-164 Identity = 236/237 (99.58%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Csor.00g162550 vs. NCBI nr
Match: XP_038893568.1 (proteasome subunit alpha type-5 [Benincasa hispida]) HSP 1 Score: 464 bits (1193), Expect = 4.96e-164 Identity = 235/237 (99.16%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Csor.00g162550 vs. NCBI nr
Match: XP_022994867.1 (proteasome subunit alpha type-5-like [Cucurbita maxima] >XP_022994869.1 proteasome subunit alpha type-5-like [Cucurbita maxima] >XP_022994870.1 proteasome subunit alpha type-5-like [Cucurbita maxima] >KAG6573463.1 Proteasome subunit alpha type-5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012610.1 Proteasome subunit alpha type-5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 463 bits (1191), Expect = 1.00e-163 Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of Csor.00g162550 vs. ExPASy TrEMBL
Match: A0A6J1KLM8 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111495679 PE=3 SV=1) HSP 1 Score: 466 bits (1200), Expect = 2.06e-165 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Csor.00g162550 vs. ExPASy TrEMBL
Match: A0A6J1EGM0 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111433997 PE=3 SV=1) HSP 1 Score: 466 bits (1200), Expect = 2.06e-165 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Csor.00g162550 vs. ExPASy TrEMBL
Match: A0A6J1JX37 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111490465 PE=3 SV=1) HSP 1 Score: 463 bits (1191), Expect = 4.84e-164 Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of Csor.00g162550 vs. ExPASy TrEMBL
Match: A0A0A0M0T3 (Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_1G701940 PE=3 SV=1) HSP 1 Score: 464 bits (1193), Expect = 1.23e-163 Identity = 235/238 (98.74%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of Csor.00g162550 vs. ExPASy TrEMBL
Match: A0A1S3C987 (Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103498261 PE=3 SV=1) HSP 1 Score: 462 bits (1188), Expect = 1.39e-163 Identity = 234/237 (98.73%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Csor.00g162550 vs. TAIR 10
Match: AT3G14290.1 (20S proteasome alpha subunit E2 ) HSP 1 Score: 447.2 bits (1149), Expect = 9.2e-126 Identity = 224/237 (94.51%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of Csor.00g162550 vs. TAIR 10
Match: AT1G53850.1 (20S proteasome alpha subunit E1 ) HSP 1 Score: 445.3 bits (1144), Expect = 3.5e-125 Identity = 223/237 (94.09%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of Csor.00g162550 vs. TAIR 10
Match: AT1G53850.2 (20S proteasome alpha subunit E1 ) HSP 1 Score: 445.3 bits (1144), Expect = 3.5e-125 Identity = 223/237 (94.09%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of Csor.00g162550 vs. TAIR 10
Match: AT3G22110.1 (20S proteasome alpha subunit C1 ) HSP 1 Score: 171.4 bits (433), Expect = 9.8e-43 Identity = 96/236 (40.68%), Postives = 148/236 (62.71%), Query Frame = 0
BLAST of Csor.00g162550 vs. TAIR 10
Match: AT1G79210.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein ) HSP 1 Score: 157.5 bits (397), Expect = 1.5e-38 Identity = 81/234 (34.62%), Postives = 141/234 (60.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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