Csor.00g161960 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g161960
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr13: 7774912 .. 7776271 (+)
RNA-Seq ExpressionCsor.00g161960
SyntenyCsor.00g161960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGCCGCTACACCTCGACATTCTCCACATCACCTTGGTGTTGTCCTCACGAGCAACACACTTTGCTTTAATGTTCTTGGTTCCATAAATTTTATAGATGACGATTTTACCCCTAACGGAAACTAATCATATTGATAAATTTCGAGGTTCTAATCACACTACAACTGTTAATCATGGTCAACAAATTAACGAAAAACCATACAACCATAAGAAAAATGATTGTAAATCACATGCTTGCCTCGAGGTACGAGCAAGCTATGCATGCTCGTCCCCCCAAATGAAAGAGATAATCACGTACTTCCACTTTAGCTAAGTGATAGCACCTAAAGTCTTATAAATTGTTACTGAATAAGATGCCTTTTTAGAGATGGAGTGCCTCGTTTATCAAAGTTGGTTGGCAAGTTATAGACTCGATCTTTGACTTTCCACTTTAATGTCTCTATTCGCATAGACGATTTCATAAATTCATTCAAATGTTTGACCATTGGGTTTCACGACAACCATTGAAAACTATTTGGAAATGGAAAAAAAAAAAAAAACGTATTATATATATATACACACACACATATATATACACACATATATATACAAAGGTTTTATCATTTACTAAGATGAAAAGCTTATACCAAAGAGATGGCCATTCATTTTCCATTCCCATCCTTGCATGATCCAGACCGCTCATAAGAGTGTAGAACTCATTGTGATAATTTGGGTGTTTTGCACAGAGAACACGCGTCGGTGGTTAATTCATCCATTACTGTGCACAGTGGGAGATTGAGAGCGAGCGAGCAGGAATCGCGGAAGGAACACGGTAGGTTCTCTCAATTTCAGAAGCATTTCCTTTGCGGTAACGATTAATCCTTAATTTGTTAACTGCGTGGATATTAGAATTTGCCATCTTCGTTAGCAATCAGGATGTTCGTCAATTTGTAACTTTGATCTTAAACCATGCAGGTGTTTCTTTCCTGATTTGAGAACCGATTGGACGGCTTTGTGGATCAGTTGCCTGGTAAAGGCTTCCTTATCTTTCTTTTATCCGAAAGGGGTAATTTAGCTTTTCTAATTTGGATTCTATTGTCATATATTTACATTTTCTTCGACAAGCATCGATGTTTTTAGAAGATAGTAGACACGTTTAATGAATTCAAAGCCCTTTTTGAAATATCTATGATGATTTGTTGCATCAGAAAGAAACGTATGTCAGTTGAAAGTGTTGATCCTTAGATCACTGTCATTTTGTCCTTGCTCTGGCGAAGTCGAGAATTCAAGACATATACAATTTGCTCACTATATTTTCTTTCAAATCTGAATCCTCCTTCAGAGTTACTCCAAGACTTTTAAAAGGCTGGTCCTCTGA

mRNA sequence

ATGGTCGCCGCTACACCTCGACATTCTCCACATCACCTTGGTGTTGTCCTCACGAGCAACACACTTTGCTTTAATTGGGAGATTGAGAGCGAGCGAGCAGGAATCGCGGAAGGAACACGGTGTTTCTTTCCTGATTTGAGAACCGATTGGACGGCTTTGTGGATCAGTTGCCTGAGTTACTCCAAGACTTTTAAAAGGCTGGTCCTCTGA

Coding sequence (CDS)

ATGGTCGCCGCTACACCTCGACATTCTCCACATCACCTTGGTGTTGTCCTCACGAGCAACACACTTTGCTTTAATTGGGAGATTGAGAGCGAGCGAGCAGGAATCGCGGAAGGAACACGGTGTTTCTTTCCTGATTTGAGAACCGATTGGACGGCTTTGTGGATCAGTTGCCTGAGTTACTCCAAGACTTTTAAAAGGCTGGTCCTCTGA

Protein sequence

MVAATPRHSPHHLGVVLTSNTLCFNWEIESERAGIAEGTRCFFPDLRTDWTALWISCLSYSKTFKRLVL
Homology
[Close]
BLAST of Csor.00g161960 vs. NCBI nr
Match: KAG6583850.1 (hypothetical protein SDJN03_19782, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150 bits (380), Expect = 5.30e-46
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MVAATPRHSPHHLGVVLTSNTLCFNWEIESERAGIAEGTRCFFPDLRTDWTALWISCLSY 60
          MVAATPRHSPHHLGVVLTSNTLCFNWEIESERAGIAEGTRCFFPDLRTDWTALWISCLSY
Sbjct: 1  MVAATPRHSPHHLGVVLTSNTLCFNWEIESERAGIAEGTRCFFPDLRTDWTALWISCLSY 60

Query: 61 SKTFKRLVL 69
          SKTFKRLVL
Sbjct: 61 SKTFKRLVL 69

The following BLAST results are available for this feature:
BLAST of Csor.00g161960 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g161960 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583850.15.30e-46100.00hypothetical protein SDJN03_19782, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g161960 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g161960 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g161960.m01Csor.00g161960.m01mRNA