Csor.00g161160 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGGACCCAGAAGTTCAAGAGGCCTCAAAGTGATCGAAAGATCTCCGTCAAGGTATTTTAATTTTCTTTGGCTTTTCGTCCCATCTATTTGTCTTTACCATAGAATGTGAAATAAGGAAGATGATGATATGTATTGTCGCCCCAGTCTTAGTTGCATCTATTGATGCACGATGGTGACTGACAGAGTATCTGATTTGTTTATACTATTGAATGTGCAATAAGGAAGATGATGATATATATTGTCGCCCCAGTCTTAGTTGCATCTATTGATGCACGGTGGTGACTGACAGAGTATCTGATTCTTGTTGTTAACAGCACATTTATTCTGATTTGAGTTTAGAAGATACTATTACTTGGTTTTCGGTTTTTATTTTTGAATTATATTGGTTGAGGTTTGGTGTCGTTGGATGGATCTGATGATAGACTAACAACCATGCTGACTTGTGTACTTGGCACTTATTTTCCCCTAGAGATGCAACAAGGCGTGATGATGATAACCCATCATTTCTGCACTTGAATGATGATAATCTCATGCACTACCATCTGATCTTTGTTGTATTTTCCATTCTTTTATTAGTGATAAAGCGTTATTTATAATTAGTTTTGTAGCACGTAGTTTTTCCGGAAGACATGCAACTAGGCGTGATGATGATAACCCATCATTTCTGTACTTGAATGATGAATATTTTCATGCACTACCATCTGATCTTCGTTGTATGTTCCATTCTTTTATTAGTTTCATCATCTTTTGAATGATGTTGCATTTTAGTTTTTATTTTCTTTGATCATTTAATGTTCTCTTTGGCTATATATATGAAGCCGCCCATGGTATCTAATGTCCAGTCTTCAATTTAAATGGCTGGACATCTCGTTTTTAGGGCGAAGATGAATTATATTCAGGTCTTTGCGACACAGTTTGCTTAAAAACGTATAAGCTTTCTGTTACTGAAACCCTGTGTACAGTTCTGTTGTTTATCTACCTTCGTCTTTCATCTATTGTTGGCGAACAATTCGGCTTTTTCTAATCTCTTTTGTTCATCCAATAGGAAAGCTGGAGAAGGCCAAAGGGTATTGATTCCAGAGTTCGAAGAAAGTTCAAAGGATGTACGTTGATGCCAAATATTGGTTATGGCACCGACAAAAAGACCCGCCACTACTTGCCTAATGGGTTTAAGAAGTTCGTTGTTCACAATGTCAAGGAGCTCGAAATCTTGATGATGCACAATAGGTATTTAGAAACTTCCAATGTGGGACTAAAATTGTTTGTATATGTTGCCATTTATCTCAAGCTTTTGTGTTCTTTTACCTATAGGACCTACTGTGCCGAGATTGCCCACGATGTTTCCACAAAGAAGAGGAAAGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTCACCAACAAGCTCGCTAGGTTACGCAGCCAAGAGGATGAATAA ATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGGACCCAGAAGTTCAAGAGGCCTCAAAGTGATCGAAAGATCTCCGTCAAGGAAAGCTGGAGAAGGCCAAAGGGTATTGATTCCAGAGTTCGAAGAAAGTTCAAAGGATGTACGTTGATGCCAAATATTGGTTATGGCACCGACAAAAAGACCCGCCACTACTTGCCTAATGGGTTTAAGAAGTTCGTTGTTCACAATGTCAAGGAGCTCGAAATCTTGATGATGCACAATAGGACCTACTGTGCCGAGATTGCCCACGATGTTTCCACAAAGAAGAGGAAAGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTCACCAACAAGCTCGCTAGGTTACGCAGCCAAGAGGATGAATAA ATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGGACCCAGAAGTTCAAGAGGCCTCAAAGTGATCGAAAGATCTCCGTCAAGGAAAGCTGGAGAAGGCCAAAGGGTATTGATTCCAGAGTTCGAAGAAAGTTCAAAGGATGTACGTTGATGCCAAATATTGGTTATGGCACCGACAAAAAGACCCGCCACTACTTGCCTAATGGGTTTAAGAAGTTCGTTGTTCACAATGTCAAGGAGCTCGAAATCTTGATGATGCACAATAGGACCTACTGTGCCGAGATTGCCCACGATGTTTCCACAAAGAAGAGGAAAGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTCACCAACAAGCTCGCTAGGTTACGCAGCCAAGAGGATGAATAA MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE Homology
BLAST of Csor.00g161160 vs. ExPASy Swiss-Prot
Match: P49211 (60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2) HSP 1 Score: 235.0 bits (598), Expect = 5.1e-61 Identity = 116/133 (87.22%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of Csor.00g161160 vs. ExPASy Swiss-Prot
Match: Q9FHG2 (60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 3.3e-60 Identity = 113/133 (84.96%), Postives = 126/133 (94.74%), Query Frame = 0
BLAST of Csor.00g161160 vs. ExPASy Swiss-Prot
Match: E2RKA8 (60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 3.9e-45 Identity = 89/130 (68.46%), Postives = 113/130 (86.92%), Query Frame = 0
BLAST of Csor.00g161160 vs. ExPASy Swiss-Prot
Match: P62910 (60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2) HSP 1 Score: 182.2 bits (461), Expect = 3.9e-45 Identity = 89/130 (68.46%), Postives = 113/130 (86.92%), Query Frame = 0
BLAST of Csor.00g161160 vs. ExPASy Swiss-Prot
Match: Q76KA3 (60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3) HSP 1 Score: 182.2 bits (461), Expect = 3.9e-45 Identity = 89/130 (68.46%), Postives = 113/130 (86.92%), Query Frame = 0
BLAST of Csor.00g161160 vs. NCBI nr
Match: XP_022927470.1 (60S ribosomal protein L32-1 [Cucurbita moschata] >XP_022927471.1 60S ribosomal protein L32-1 [Cucurbita moschata] >XP_023001487.1 60S ribosomal protein L32-1 [Cucurbita maxima] >XP_023001488.1 60S ribosomal protein L32-1 [Cucurbita maxima] >KAG6583929.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019543.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 263 bits (672), Expect = 1.58e-88 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Csor.00g161160 vs. NCBI nr
Match: XP_023519489.1 (60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >XP_023519490.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 263 bits (671), Expect = 2.25e-88 Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Csor.00g161160 vs. NCBI nr
Match: XP_011657475.1 (60S ribosomal protein L32-1 [Cucumis sativus] >KGN65577.1 hypothetical protein Csa_019557 [Cucumis sativus]) HSP 1 Score: 259 bits (662), Expect = 5.30e-87 Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Csor.00g161160 vs. NCBI nr
Match: XP_038894346.1 (60S ribosomal protein L32-1 [Benincasa hispida]) HSP 1 Score: 259 bits (663), Expect = 7.33e-87 Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Csor.00g161160 vs. NCBI nr
Match: XP_022140193.1 (60S ribosomal protein L32-1 [Momordica charantia] >XP_022140194.1 60S ribosomal protein L32-1 [Momordica charantia]) HSP 1 Score: 258 bits (660), Expect = 1.07e-86 Identity = 129/133 (96.99%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Csor.00g161160 vs. ExPASy TrEMBL
Match: A0A6J1KGP3 (60S ribosomal protein L32-1 OS=Cucurbita maxima OX=3661 GN=LOC111495610 PE=3 SV=1) HSP 1 Score: 263 bits (672), Expect = 7.66e-89 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Csor.00g161160 vs. ExPASy TrEMBL
Match: A0A6J1EP15 (60S ribosomal protein L32-1 OS=Cucurbita moschata OX=3662 GN=LOC111434287 PE=3 SV=1) HSP 1 Score: 263 bits (672), Expect = 7.66e-89 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Csor.00g161160 vs. ExPASy TrEMBL
Match: A0A0A0LXN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G462020 PE=3 SV=1) HSP 1 Score: 259 bits (662), Expect = 2.57e-87 Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Csor.00g161160 vs. ExPASy TrEMBL
Match: A0A6J1CF23 (60S ribosomal protein L32-1 OS=Momordica charantia OX=3673 GN=LOC111010921 PE=3 SV=1) HSP 1 Score: 258 bits (660), Expect = 5.18e-87 Identity = 129/133 (96.99%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Csor.00g161160 vs. ExPASy TrEMBL
Match: A0A1S3B8Z6 (60S ribosomal protein L32-1 OS=Cucumis melo OX=3656 GN=LOC103487346 PE=3 SV=1) HSP 1 Score: 258 bits (658), Expect = 1.05e-86 Identity = 129/133 (96.99%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Csor.00g161160 vs. TAIR 10
Match: AT4G18100.1 (Ribosomal protein L32e ) HSP 1 Score: 235.0 bits (598), Expect = 3.6e-62 Identity = 116/133 (87.22%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of Csor.00g161160 vs. TAIR 10
Match: AT5G46430.1 (Ribosomal protein L32e ) HSP 1 Score: 232.3 bits (591), Expect = 2.3e-61 Identity = 113/133 (84.96%), Postives = 126/133 (94.74%), Query Frame = 0
BLAST of Csor.00g161160 vs. TAIR 10
Match: AT5G46430.2 (Ribosomal protein L32e ) HSP 1 Score: 232.3 bits (591), Expect = 2.3e-61 Identity = 113/133 (84.96%), Postives = 126/133 (94.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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