Csor.00g161100 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTACCCAGATGAGATGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAAGCAGGTGAAGAACAGTCGCAACCACGAAGAAGTGGTCGAGGGAAGATTGAAATCAAGAGAATTGAAAACACAACAAATCGCCAAGTTACTTTCTGTAAACGCAGAAATGGTTTGCTTAAGAAGGCTTATGAGCTTTCTGTTCTCTGTGATGCTGAGGTCGCTCTTATTGTCTTCTCCACCCGTGGTCGCCTCTATGAGTATGCCAACAACAGGTCCACTAACTCCTTCTCCTTCTCCCTTTTCCTTAACCCTTTTCCTTAATTGTAACCGCTCAAGTCCACCGCTGGCTATTTACGTATAGCTATTAGTCTATGGCTTTAAAATTTATGAGATTCTACATGGAACTAACGGAAAAATCCACTAGATAATAAACTATTGGTTCTAAGCCATCTTTGATGATGAATCAACAATCAGAAGTGCTTTTCTTGCATATTCTTGATAAACAGACGTTTATATATACCTATAGGAAGATCTGTTTGGGAAGTACGCAGCCCCTTTGACATGTCTTCGTTTGCAAAGAATTCTCGATGTCAAAACATAGAGACAAAAGACCGATCTTTGAATAGGAAAAAGAGAGGATCTGTAGGATCCTAAATGAATTGGCTTATTCGAAAAAAAGTCTTGTTCGTTGGAAGATCTATCTCGTGTTTGGTACTGCATAGTTTTACTCTGCAAGAACTCCGAATCATCCTCTTCATCAGAAATGATCCGTTTGCCCTGAAATGACCTAGCTCAATAGAAAATCCCAATTCATTGGACTTTTCGATGCAATCAAATTGAAAGCCCGAAAGCCGCAGAAACATACTTTATTAGGGCATGAAAACCTCTCCCTAGTAGAGGCTCATGAATATAAGTAACGGACTAAAACTAATAGTATCTACTAGCTGTGACCTGATGAATATCTTACGTTCGAGTAAAACAATAATTTTACTAACAGGACAGAGTAGGGACGAGGTTAAGAAAAACGAATGGGAACAACATTGTTAACCTCGACGCTACACCGTCATTATAGTCGAGTCTAGATGATTAGGTTGATGATATTGAAACCCTAAGAAGAATGTTATTGAAGCAATGAAGAAATTTGAAATAACTGTTGCAGTGTTAGGGCTACGATTTCGAGGTACAAAAAGGCATGCTCGGATCCCTTAAGCACCGGGTCCGTTTCGGAAGCCAATACACAGGTATCGTATCCATTTAGGGTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCGATTGTTTAATCGTAACGGTGGCTCTGTTTCAGTTCTACGAGCAAGAATCCGCGAAATTGCGAGCGCAAATCGGGAATATGCAAAACCTAAACAGGTAATTTGATTTTGATTTTGATTTTGATTTTGATTTTGATTTTGATTTTGATTTTGATTTTGATTTTGATTGATTGAATGAGTCATATTTGTGTTTCTGAGCGTTGGAATTGAAGGCATTTGTTGGGGGAATCCATCAGTTCGTTGTCGGTGAAAGATCTCAAAAGCCTGCAGGTGAAACTGGAGAAGGGAATTAGCCGAATTCGATCCAGAAAGGTAACTCTCTAAATTCCACCCAATTAATTAAAAACCCTAATCTAATTTGGATTTCATTTCATTGAGCGTTGGAATGATCACGAGGGGTTTATAATCAAAGAATACTACCTCTATTGGAATAAGGGAGAAGTCCAAAGTAAAGTCACGAGAGCTTATGCTTAAAGTGTTCAATATCATGCCATTGTGGAGAGTCGTGTTCGTCTAACATGATATCAAAGTCATGCCCTAAACATAGCCGTGCCAATAGATTGGTAAATTCTCAAATGTCGAATAAAGGATGGACTCCAAAAAAAAAAAAAAAAAAAAAAAGAGTCGAGCCTCGATTAAGAGGAGGCGTACTTTGTTCGAGGGGAGGTGTTAGATGATGAAAGTTTCACATCAACTAATTTAGAAAATGATCATGAGTTTATAATAAAAAATACTTTCTCGGAGTGGAGGTGTTGGATGATGAAAGTCTCATATCCCTTAATTTAGAGAATGATCACGAGTTTATAATAAAAAAAAATAATCTCTATGGGAATGAGAGAGAACTTATGACAATATCATACTATAACTAGACAACATTATACCATTGTGGAGAGTCCTGTGTCATTTTTCTCATTTTTTGTGCACAGAATGAGGTTCTGTTTGCGGAGATTGAGTACATGCACAAAAGGGTATGCACTTTTCTTGCTCTACTTTTATTCATTTTACATTTCTTTTATTTTAACTTACAAAGTATTTTAAATATTCAACCATTTGCAAATAAATACAGGAAATTGAACTGCACAACACCAACCAGCTGATACGAGCAAAGGTACGGTCTGTTCTAAAAATCTGTGTTCAATTTTTCAATTTTTTTTTTTAAATTTTTTGGTTCTACACCGATTTATATTAAGATTTTTATTTCTGCACTTCTATTAATACATCATGCCTTTCTAGTCTAGTTTAATAAATATTTTTGGGATATTTTTTATAAAATAATTTCAGTTCAATAATTACATGACGAGGATAATACGTCTTTAATTTTTCAAAATTCAAAAAATATTCATGAATCAAAGATGGAAACGATACAGGGTACATATATCAAAGATAAGAATTTTAATTTTTAGGATATTAATGCTATTTTAGAATGTTTGTGGATATTTTCGAAAATTTTATCAATAATTTTGTCTATGAATTGATATTTTAAAATTTAAAAGAGTATTTAAAAATTAAGTATATTTATTAATTTTTTAAAAAAGTTTAAGGATATTAATGAGATTTTTGAAAGTAGGTAATTTTTAAACCATTTTTTAAAGTTAAAAGAATTTTTAAAATAGAATAGTAATGATTTTCGTTATTAAATATTAATAGTATATTTAAAATAGAGTAGTCGGGATCTTTCTTAAAAAAAACTATTTAACATTTTTTAAAGTTTAAATATATATAGGTATGTATATATCAATAATATATTATTTTTATACCATTCATTCAAATCCATAATGTATCGTATTTAATATAAAGTGATCTCTTATATACCTTATGATATACCGTTTCTAAATTTTAATATTTGTAAGCAAGAATAATATTTTAAAATTAGAGTTAGGAAAGGCAGAAATTATGAAATAGATAGATGTTTTGGAGTCGACATGAACATAGTTTAAAACGAATACGTAAATGGTATGAATTTGCAGATAACGGAGATGGAGAGAAGAGAACAAAACAGAAGTGGAAATAACAGCATAGGTGCAAGAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGATGTGTGGGTCCAAATTTAGAGGGTAATGAGCAATACTACTTTCCCCATCAAAATCACCATATCTCCCTGCAACTCATCTAA ATGGGTTACCCAGATGAGATGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAAGCAGGTGAAGAACAGTCGCAACCACGAAGAAGTGGTCGAGGGAAGATTGAAATCAAGAGAATTGAAAACACAACAAATCGCCAAGTTACTTTCTGTAAACGCAGAAATGGTTTGCTTAAGAAGGCTTATGAGCTTTCTGTTCTCTGTGATGCTGAGGTCGCTCTTATTGTCTTCTCCACCCGTGGTCGCCTCTATGAGTATGCCAACAACAGTGTTAGGGCTACGATTTCGAGGTACAAAAAGGCATGCTCGGATCCCTTAAGCACCGGGTCCGTTTCGGAAGCCAATACACAGTTCTACGAGCAAGAATCCGCGAAATTGCGAGCGCAAATCGGGAATATGCAAAACCTAAACAGGCATTTGTTGGGGGAATCCATCAGTTCGTTGTCGGTGAAAGATCTCAAAAGCCTGCAGGTGAAACTGGAGAAGGGAATTAGCCGAATTCGATCCAGAAAGAATGAGGTTCTGTTTGCGGAGATTGAGTACATGCACAAAAGGGAAATTGAACTGCACAACACCAACCAGCTGATACGAGCAAAGATAACGGAGATGGAGAGAAGAGAACAAAACAGAAGTGGAAATAACAGCATAGGTGCAAGAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGATGTGTGGGTCCAAATTTAGAGGGTAATGAGCAATACTACTTTCCCCATCAAAATCACCATATCTCCCTGCAACTCATCTAA ATGGGTTACCCAGATGAGATGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAAGCAGGTGAAGAACAGTCGCAACCACGAAGAAGTGGTCGAGGGAAGATTGAAATCAAGAGAATTGAAAACACAACAAATCGCCAAGTTACTTTCTGTAAACGCAGAAATGGTTTGCTTAAGAAGGCTTATGAGCTTTCTGTTCTCTGTGATGCTGAGGTCGCTCTTATTGTCTTCTCCACCCGTGGTCGCCTCTATGAGTATGCCAACAACAGTGTTAGGGCTACGATTTCGAGGTACAAAAAGGCATGCTCGGATCCCTTAAGCACCGGGTCCGTTTCGGAAGCCAATACACAGTTCTACGAGCAAGAATCCGCGAAATTGCGAGCGCAAATCGGGAATATGCAAAACCTAAACAGGCATTTGTTGGGGGAATCCATCAGTTCGTTGTCGGTGAAAGATCTCAAAAGCCTGCAGGTGAAACTGGAGAAGGGAATTAGCCGAATTCGATCCAGAAAGAATGAGGTTCTGTTTGCGGAGATTGAGTACATGCACAAAAGGGAAATTGAACTGCACAACACCAACCAGCTGATACGAGCAAAGATAACGGAGATGGAGAGAAGAGAACAAAACAGAAGTGGAAATAACAGCATAGGTGCAAGAGGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGATGTGTGGGTCCAAATTTAGAGGGTAATGAGCAATACTACTTTCCCCATCAAAATCACCATATCTCCCTGCAACTCATCTAA MGYPDEMQKQKQKQKQKQAGEEQSQPRRSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVRATISRYKKACSDPLSTGSVSEANTQFYEQESAKLRAQIGNMQNLNRHLLGESISSLSVKDLKSLQVKLEKGISRIRSRKNEVLFAEIEYMHKREIELHNTNQLIRAKITEMERREQNRSGNNSIGARGEEGEGEGEGEGEGEGEGEGEGEGEGCVGPNLEGNEQYYFPHQNHHISLQLI Homology
BLAST of Csor.00g161100 vs. ExPASy Swiss-Prot
Match: Q43585 (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 2.8e-74 Identity = 145/194 (74.74%), Postives = 172/194 (88.66%), Query Frame = 0
BLAST of Csor.00g161100 vs. ExPASy Swiss-Prot
Match: Q40885 (Floral homeotic protein AGAMOUS OS=Petunia hybrida OX=4102 GN=AG1 PE=1 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 9.0e-73 Identity = 141/192 (73.44%), Postives = 170/192 (88.54%), Query Frame = 0
BLAST of Csor.00g161100 vs. ExPASy Swiss-Prot
Match: Q93XH4 (Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.4e-72 Identity = 140/178 (78.65%), Postives = 161/178 (90.45%), Query Frame = 0
BLAST of Csor.00g161100 vs. ExPASy Swiss-Prot
Match: Q40872 (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.9e-71 Identity = 139/185 (75.14%), Postives = 163/185 (88.11%), Query Frame = 0
BLAST of Csor.00g161100 vs. ExPASy Swiss-Prot
Match: Q40168 (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum OX=4081 GN=AG1 PE=2 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 8.4e-71 Identity = 138/198 (69.70%), Postives = 167/198 (84.34%), Query Frame = 0
BLAST of Csor.00g161100 vs. NCBI nr
Match: KAG6583935.1 (Floral homeotic protein AGAMOUS, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 497 bits (1280), Expect = 1.07e-176 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of Csor.00g161100 vs. NCBI nr
Match: XP_022927464.1 (floral homeotic protein AGAMOUS-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 452 bits (1163), Expect = 3.61e-159 Identity = 249/270 (92.22%), Postives = 249/270 (92.22%), Query Frame = 0
BLAST of Csor.00g161100 vs. NCBI nr
Match: XP_022927465.1 (floral homeotic protein AGAMOUS-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 448 bits (1153), Expect = 1.12e-157 Identity = 247/270 (91.48%), Postives = 247/270 (91.48%), Query Frame = 0
BLAST of Csor.00g161100 vs. NCBI nr
Match: XP_023519255.1 (floral homeotic protein AGAMOUS-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 436 bits (1122), Expect = 6.37e-153 Identity = 241/270 (89.26%), Postives = 244/270 (90.37%), Query Frame = 0
BLAST of Csor.00g161100 vs. NCBI nr
Match: XP_023001459.1 (floral homeotic protein AGAMOUS-like [Cucurbita maxima]) HSP 1 Score: 431 bits (1108), Expect = 7.76e-151 Identity = 238/270 (88.15%), Postives = 242/270 (89.63%), Query Frame = 0
BLAST of Csor.00g161100 vs. ExPASy TrEMBL
Match: A0A6J1EI26 (floral homeotic protein AGAMOUS-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434283 PE=4 SV=1) HSP 1 Score: 452 bits (1163), Expect = 1.75e-159 Identity = 249/270 (92.22%), Postives = 249/270 (92.22%), Query Frame = 0
BLAST of Csor.00g161100 vs. ExPASy TrEMBL
Match: A0A6J1EP10 (floral homeotic protein AGAMOUS-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434283 PE=4 SV=1) HSP 1 Score: 448 bits (1153), Expect = 5.43e-158 Identity = 247/270 (91.48%), Postives = 247/270 (91.48%), Query Frame = 0
BLAST of Csor.00g161100 vs. ExPASy TrEMBL
Match: A0A6J1KMT2 (floral homeotic protein AGAMOUS-like OS=Cucurbita maxima OX=3661 GN=LOC111495587 PE=4 SV=1) HSP 1 Score: 431 bits (1108), Expect = 3.76e-151 Identity = 238/270 (88.15%), Postives = 242/270 (89.63%), Query Frame = 0
BLAST of Csor.00g161100 vs. ExPASy TrEMBL
Match: Q43422 (Putative transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G467100 PE=2 SV=1) HSP 1 Score: 320 bits (821), Expect = 2.20e-107 Identity = 182/250 (72.80%), Postives = 198/250 (79.20%), Query Frame = 0
BLAST of Csor.00g161100 vs. ExPASy TrEMBL
Match: A0A1S3B8P7 (floral homeotic protein AGAMOUS-like OS=Cucumis melo OX=3656 GN=LOC103487219 PE=4 SV=1) HSP 1 Score: 320 bits (820), Expect = 3.35e-107 Identity = 184/252 (73.02%), Postives = 199/252 (78.97%), Query Frame = 0
BLAST of Csor.00g161100 vs. TAIR 10
Match: AT4G18960.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 256.9 bits (655), Expect = 1.8e-68 Identity = 135/195 (69.23%), Postives = 166/195 (85.13%), Query Frame = 0
BLAST of Csor.00g161100 vs. TAIR 10
Match: AT3G58780.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 253.1 bits (645), Expect = 2.6e-67 Identity = 131/197 (66.50%), Postives = 164/197 (83.25%), Query Frame = 0
BLAST of Csor.00g161100 vs. TAIR 10
Match: AT2G42830.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 249.6 bits (636), Expect = 2.9e-66 Identity = 137/213 (64.32%), Postives = 168/213 (78.87%), Query Frame = 0
BLAST of Csor.00g161100 vs. TAIR 10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 244.6 bits (623), Expect = 9.2e-65 Identity = 137/215 (63.72%), Postives = 168/215 (78.14%), Query Frame = 0
BLAST of Csor.00g161100 vs. TAIR 10
Match: AT4G09960.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 229.2 bits (583), Expect = 4.0e-60 Identity = 136/215 (63.26%), Postives = 163/215 (75.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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