Csor.00g161030 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g161030
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RAB GTPase homolog A1C
Location	Csor_Chr13: 8354174 .. 8359707 (+)
RNA-Seq Expression	Csor.00g161030
Synteny	Csor.00g161030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACTGGGAAGCTGTTAATGGCCGACACCGGGGCTGGGGACGGAGCGGAGGATTCGATTGCTGTAATAATAATGTGGGGGATGGGCGGGGATGAGGCGGCGACCACGGAGGTAGTCCTGCGCGGGGAGACCGGCGTGGGTTTTATCGCTGGGAGCAGACGGCGGCGTGCAGCCTTTTGGGAGAGCGGCGAAGAAGAGCCGGTTGATGTTGAGGCCTCTGGATTGGAAGATGGTGAAATGGAGGATAGAAGAAGAAGAAGAAGAAGAAGGGGAAGTAAAGGTTTGTTGGTGGAGGCAGCCATGAGAGAGAGAGAGGGAGAAGAAAATGGAATAAGAAGAATGTGGATTTGAGGAATGGGGGCGTGTACATATAAACAAGTTTAAAGGTTAAATTAAATGGTTGATCATAACGTTAGACATGATATAATGGCGATCATAAGATGGGAATCAAATCGGGATTGGGGAGACATTGATTTAATTAAGGGAGGTAGAAAATGGATTTGGGATCCAACGAGGCAAAAGAGGCGATGTATGGAGGATGTGGAAAAAGAAGGAAGGTTCCAAAAAGCGAATAGTATGGGGATTGGGGAAGTCAAAAGACAGCGGATATTTGAATTTCTGTGCCATTAAATGTTCATCCTTACACGGTGCAACAATGCCGCGTGTTCGCCATGGCTTCCGCCTTTGCCCCTTAGCCGCCCACTGCCCCCGCCCTGTCTTCCTAATTTTATTTATTTATTGTTTAGTTCAATAAAATGGTAAGTCAAATATTCAACGTTCAACTTTCTTTTATATTAATCACAAAAATCCAATTTCTACATTTTATATCCATCTTTACAATAATTTTTTAATAATTAAATTCTCCACAAATCACTCAATTTTATAAAAGAAAATCATAAATTTATTAAATAGAAGGTCAAAATTGTAATTGTAATTGTAATATTTTTCAAATTGATTTTCACGTAAATTAATACATAAAATCCATTCTTATCCCATATTTTACATGTCAAAGCGGGATATTTTTATGTGTATGAATGTGATCTAAACTATAATATATTTGAGAGTCATGAAAATTTTAGAGAAAATAGGTTGAAATTTGGAGAGGAAGATGTGGACGGTTGGAATTTAGAAAATTATAAGATAGCGACGGCCAACTTTAAAGTCCAATGGACGGGCTTTAAGTCTAAGATCAAACGTATGAAATTGTTGTACGTATCTTTGATTTTATTTATTCATATTTTCTTCATCTGTCACAATCCCATGCATATAACGTTTCTAAATGTTTAACATAAAAGACAAAAAAAAAAAAAATATTGAAGTTAGCAAAATACTTTATAATTAACATTCTTTTTAAAATATTCTATTTTATCTCTAAATTGTTCTCTTTTTATTTATTTGTTTATTTAATTCAATTAAGCTGGTGACTAGTTTTAATGGTAAAATACACCAAAATGTATAAAGATGTATTGTTGTCCTTACATTTTGGATTCTATGTACGGAAGATATTCGATATTTTCTGTCTCATATGGTTAATTATAAGGGAACACAATGAATTTATTAATAAATAACACATCTTCATTGGTATGAGACATTTTCGATAAATTAAAAGTAAAACTATGAAAATTATACACAAATTAAAGATTATCATACTATTATAAAAGGTCATGGTTCCAACATTTTATACAGTCCTGTATTAGTGAGACAAAATTATAAAGTTCGATTAATTTAGAATTTTTCTTATGAAGTCAAAATAATCATTATTCTTGAATTTTAATAGATTATTTCATTTTACTACAAAAATATAAAATTTAGATTAAATTATTTGCGGTTTAAACATTATACTCTGTATTTATAAATATTTTATAAATAGGAAATGGATATATCCGACATTTTTCCCAAAATAAAAACATTATTGTTTATTTTGAACATCATTGTAGAAAACCAAAGTTGTAGCGTTTGTAGTCCAACGGTTAGGATAATTGCCTTCCAAGCAATAGACCCGGGTTCGACTCCCGGCAAACGCAATCTCATTTTCCATTTTTGCTGAATTTGGTTTTCTTATCCTAATTCTGAATTCTTTTAACCGAAAACTTACTTAATATTTTATTTAGTGATAGAAATGTGTTTTTGCATTGCTGTGTTCCGACCTATTATATTTTTTAAAATTAAAAAAAAGTATAAAATTGTTATAACTTAATATTTTATTTATTTTTGCAGCTGATATTTTAAAGTTAAATTTCATTTAACAATTTTCTAAAAAAAAAGAAAAAAAGAAAAAAAAAAAACCATAATTTAAACCAAACTTGCAATAAGATTCGGAAGTGTCACACTTTTTCCCTCCCATAAATAAATAAGCTTCCATGATTTAAAATGACGAAAATGTCCTTCTTTAACCAGTTCGAATAGCAGTAGAGTTTGGGCATTGGCGTCAATTCAACAGCCTTCTAGAACCAAAAAAAAGAAGACCAATTTCAATTCCAAAATTTGAAAAAGAGACGTGTTCTCCTCCTCCTCTTTGGAGTCCAGCCCAGCACAGGCCAACCCGCGGTCTCTCCCATTTCCAATTCACAATCTCAAGAGTATCGAGAAAGGACCCCCAAAAAGCGAGCACGCAGAGATCTAGCCATTCCCCGTTCCTCTTCCCTCACTCCAACCAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGAAGGGGGCACTGTGATGGCCGGCTACAGAGCTGAAGATGACTACGACTACCTCTTTAAGGTGGTTCTGATTGGAGATTCCGGCGTGGGCAAGTCCAATTTGCTCTCCAGGTTCACCAAAAACGAGTTCAGCCTCGAGTCCAAGTCCACCATTGGGGTTGAGTTTGCTACTCGCAGCTTGAATGTCGATAGCAAGGTCATCAAGGCCCAGATTTGGGATACTGCTGGCCAGGAAAGGTTCCAAATAGTTTCTCTTCCTTACCTCTCCCCTTTTCAAGATCTGGGTATTTCTTATTTTTGCTTAGGTTTTATGGTGCTTGGTATTTTGAGCTATATGGTTGTTGACGAATGGCCAATGGAATTTTTGGGTGATGCTTCTTTTAGATGATTTTACTGATGGAATTCTCTGTATTAGCTTCACTTGAATGTGAGGTTTATGATGGGTTATATCATAAATCTCTTTACCATCCACTAAATTAGAGTTTTGGATATTAGAACCGCGGAGGGTAGTTTACAAATTAAGTGGATCTGAACAGGGCTGCTTAGAGTTGTTTGTGTGGTTACACCTTAAAACATTGACGTACAAGAATGATTAGAATTCCTTAATGCTGTAGGAAATTTTTTTTTAGAGAACTTAGGCATTGCATCCCACAGACTCCAAGAACTGTTGCAATGTCTGAATGTTGTCTCTTACTTCAATTTTCTTCAAAAAAAATAAGGAATTAGGCTGTTAATTCTGTTTGGTGGGTAATCATTATTAGAAATGACTTCAAGGAATGCGACATGTTCAACAACAATTGTTATTAGATTAGGTAGTTTCCCGAGTCTGGGCCTTGAGAAAGAAGGATTACGTAGTTCCATTAAAAATTCCAGAGCATTTGTTCTTTTGTTTCTACATTGGAAATAATGAGACCCCATAGTACTAGACTTAAAATCTTTGATATCTCGACCCAAACATAAACTTGTGTGCTTTCTCAGTCATTACTGCTGCTGAGTTTAGTACTCTGCCATGGTTTCTCCGAATCATGGGCATAGGAATGGACATTCACGTGTTATAGACTTTTAGTACATCTCAACCATAGATGCTTTTGAGGTATGGGATCAAACCATGATAGCCCCCATTCACGATCCCTTTTATATGCATATTTGTCTTTGGCTTTTCATTTCAGTACTACAGAATGCAAGTTCAAGCAGTCCAGACCCCTTATGTTGAGACATATACATTCTTGGTTCTTAGTTTTTTGATCGCATAACCCTATACGGATCTACTACTCCTCTGCCTTTCTCTTCATATATTAGCTCAGAATGATGGTGTCTATATGTTTGCGTCCGTGAACTGACACCTTATCCCCCACCCTTCGTATTCTTCCTCTTTCTCTCAACTTTATGAATCCTGGAGTCTTGGGTAACAATGCCATTAGCGTTTTATCAGGATTAGTATTTGATTTCTCAAAATTGAATATATTTGCAATTTCCCTTTTCATTTTCATAAGTTACATTAACATTGTGTCCACGTCCTGTGCATGCTTTTCATTATCAAGTATTGATTCTACCTCTAGAGAGAGCTACAAATCATCCCTCTGAATAGTATAAATGAAATTGCAAATGGGGACACTCTTTTCTTTTGAATAATGGAGACAGGAATTAAACTTGGTAAACAAAAAGAACGTTTAATTCCCTCGGTAGACTAGGATTTTCACAGTTAAGGTATGAGTCTATCTTTGTGTAATGGCCTAAGTTGTTCTCTTGCGTCTGTTAAGGAGAGGTTCTCACACCCTTATAAAGAATGCTTTGTTCCTCTCTCCAATCGACGTGGGATCTCACAATCCACCCCCTTCGAAACTTAACGTTCTCACTAGCACTCGTTCCCCTCTCCAATTGATGTGGGATCTCACAATCCACCCTCCTTCAAGGCCCAACGTCCTTGGTGGCACACTGCCCGGTGTCCACCCCTCTTCGGGGCTCAACATCCTCGCTGGCACACCACCTAGTGTCTGGCTGATACCATTAGTAATGTCCCAAGCTCACTGCTAATAAATATTGTCCTCTTAAGGCTTTTTTTTATGGGCTTTCCCTCAAGATTTTAGAATACGTCTGCTAGGTAGAGGTTTTCAAACCTTTATATTGTATCTCGGTCATTTTCTGTGGTAGAAATGGAGAGAGAGTTATATTCTAAACATGATTTATTTGCTGATTCAATGCTTTAGCTGATCATCGGTGAGGTTTGGTTTGATGTTGCATTAATTAGGCGATCAATGTGCTACTTCATCCTCGATGAATCATAAAGTTTCTTAATGTGCTCAGGTTTAAATCTTGTTTACAATAGTCTTCAAGTCAATCACACACACTCCTGCCTAACTCTTTCTGTGGACTGACCATCTCTTTTCGGGTTCGTAGGTATCGTGCAATAACCAGTGCTTACTATCGAGGTGCAGTAGGTGCACTGCTTGTCTACGATGTCACACGACATTCCACTTTTGAAAACGTCGAGAGGTGGTTAAGGGAGTTGCGAGACCATACAGATCCTAACATTGTCGTCATGCTTGTCGGTAACAAGTCAGACCTTCGACACCTAGTGGCAGTATCAACAGAGGACGGAAAATCTTTTGCTGAGAAGGAGTCTCTCTATTTCATGGAAACTTCAGCACTGGAAGCAACCAATGTCGAAAACTCATTCGCCGAAGTCCTTACACAAATCTATCACATTGTAAGCAAGAAGTCCATGGAGGCTGGCGATGGCGCTGCTGCTGCTGCCACAGTTCCTTCAAAAGGAGATAAAATCGACGTCGGTAAGGACGTCTCCGCTGTAAAGAAGGCTGGCTGCTGTTCGAGTTAG

mRNA sequence

ATGATTACTGGGAAGCTGTTAATGGCCGACACCGGGGCTGGGGACGGAGCGGAGGATTCGATTGCTGTAATAATAATGTGGGGGATGGGCGGGGATGAGGCGGCGACCACGGAGGTAGTCCTGCGCGGGGAGACCGGCGTGGGTTTTATCGCTGGGAGCAGACGGCGGCGTGCAGCCTTTTGGGAGAGCGGCGAAGAAGAGCCGGTTGATGTTGAGGCCTCTGGATTGGAAGATGGTGAAATGGAGGATAGAAGAAGAAGAAGAAGAAGAAGGGGAAGTAAAGTTCGAATAGCAGTAGAGTTTGGGCATTGGCGTCAATTCAACAGCCTTCTAGAACCAAAAAAAAGAAGACCAATTTCAATTCCAAAATTTGAAAAAGAGACGTGTTCTCCTCCTCCTCTTTGGAGTCCAGCCCAGCACAGGCCAACCCGCGGTCTCTCCCATTTCCAATTCACAATCTCAAGAGTATCGAGAAAGGACCCCCAAAAAGCGAGCACGCAGAGATCTAGCCATTCCCCGTTCCTCTTCCCTCACTCCAACCAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGAAGGGGGCACTGTGATGGCCGGCTACAGAGCTGAAGATGACTACGACTACCTCTTTAAGGTGGTTCTGATTGGAGATTCCGGCGTGGGCAAGTCCAATTTGCTCTCCAGGTTCACCAAAAACGAGTTCAGCCTCGAGTCCAAGTCCACCATTGGGGTTGAGTTTGCTACTCGCAGCTTGAATGTCGATAGCAAGGTCATCAAGGCCCAGATTTGGGATACTGCTGGCCAGGAAAGGTATCGTGCAATAACCAGTGCTTACTATCGAGGTGCAGTAGGTGCACTGCTTGTCTACGATGTCACACGACATTCCACTTTTGAAAACGTCGAGAGGTGGTTAAGGGAGTTGCGAGACCATACAGATCCTAACATTGTCGTCATGCTTGTCGGTAACAAGTCAGACCTTCGACACCTAGTGGCAGTATCAACAGAGGACGGAAAATCTTTTGCTGAGAAGGAGTCTCTCTATTTCATGGAAACTTCAGCACTGGAAGCAACCAATGTCGAAAACTCATTCGCCGAAGTCCTTACACAAATCTATCACATTGTAAGCAAGAAGTCCATGGAGGCTGGCGATGGCGCTGCTGCTGCTGCCACAGTTCCTTCAAAAGGAGATAAAATCGACGTCGGTAAGGACGTCTCCGCTGTAAAGAAGGCTGGCTGCTGTTCGAGTTAG

Coding sequence (CDS)

ATGATTACTGGGAAGCTGTTAATGGCCGACACCGGGGCTGGGGACGGAGCGGAGGATTCGATTGCTGTAATAATAATGTGGGGGATGGGCGGGGATGAGGCGGCGACCACGGAGGTAGTCCTGCGCGGGGAGACCGGCGTGGGTTTTATCGCTGGGAGCAGACGGCGGCGTGCAGCCTTTTGGGAGAGCGGCGAAGAAGAGCCGGTTGATGTTGAGGCCTCTGGATTGGAAGATGGTGAAATGGAGGATAGAAGAAGAAGAAGAAGAAGAAGGGGAAGTAAAGTTCGAATAGCAGTAGAGTTTGGGCATTGGCGTCAATTCAACAGCCTTCTAGAACCAAAAAAAAGAAGACCAATTTCAATTCCAAAATTTGAAAAAGAGACGTGTTCTCCTCCTCCTCTTTGGAGTCCAGCCCAGCACAGGCCAACCCGCGGTCTCTCCCATTTCCAATTCACAATCTCAAGAGTATCGAGAAAGGACCCCCAAAAAGCGAGCACGCAGAGATCTAGCCATTCCCCGTTCCTCTTCCCTCACTCCAACCAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGAAGGGGGCACTGTGATGGCCGGCTACAGAGCTGAAGATGACTACGACTACCTCTTTAAGGTGGTTCTGATTGGAGATTCCGGCGTGGGCAAGTCCAATTTGCTCTCCAGGTTCACCAAAAACGAGTTCAGCCTCGAGTCCAAGTCCACCATTGGGGTTGAGTTTGCTACTCGCAGCTTGAATGTCGATAGCAAGGTCATCAAGGCCCAGATTTGGGATACTGCTGGCCAGGAAAGGTATCGTGCAATAACCAGTGCTTACTATCGAGGTGCAGTAGGTGCACTGCTTGTCTACGATGTCACACGACATTCCACTTTTGAAAACGTCGAGAGGTGGTTAAGGGAGTTGCGAGACCATACAGATCCTAACATTGTCGTCATGCTTGTCGGTAACAAGTCAGACCTTCGACACCTAGTGGCAGTATCAACAGAGGACGGAAAATCTTTTGCTGAGAAGGAGTCTCTCTATTTCATGGAAACTTCAGCACTGGAAGCAACCAATGTCGAAAACTCATTCGCCGAAGTCCTTACACAAATCTATCACATTGTAAGCAAGAAGTCCATGGAGGCTGGCGATGGCGCTGCTGCTGCTGCCACAGTTCCTTCAAAAGGAGATAAAATCGACGTCGGTAAGGACGTCTCCGCTGTAAAGAAGGCTGGCTGCTGTTCGAGTTAG

Protein sequence

MITGKLLMADTGAGDGAEDSIAVIIMWGMGGDEAATTEVVLRGETGVGFIAGSRRRRAAFWESGEEEPVDVEASGLEDGEMEDRRRRRRRRGSKVRIAVEFGHWRQFNSLLEPKKRRPISIPKFEKETCSPPPLWSPAQHRPTRGLSHFQFTISRVSRKDPQKASTQRSSHSPFLFPHSNQTSSSSSSSSSSSSEGGTVMAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSKKSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS

Homology

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BLAST of Csor.00g161030 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 5.6e-106
Identity = 198/219 (90.41%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVE WL+ELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAV TED KSFAEKESLYFMETSALEATNVEN+FAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 419
           K+MEA   A+ +A VPSKGDKID+GKDVSAVKK GCCS+
Sbjct: 181 KAMEA---ASESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

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BLAST of Csor.00g161030 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 3.4e-103
Identity = 194/219 (88.58%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAV TED KSFAE ESLYFMETSALE+TNVEN+F+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 419
           K+MEAG+    +  VPSKG+KIDV  DVSAVKK GCCS+
Sbjct: 181 KAMEAGED---SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

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BLAST of Csor.00g161030 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 370.5 bits (950), Expect = 2.4e-101
Identity = 188/217 (86.64%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 201 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSKV 260
           AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSL VD KV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 261 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVV 320
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWL+ELRDHTDPNIVV
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 321 MLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSKK 380
           MLVGNKSDLRHLVAV T++GK+FAE+ESLYFMETSALE+TNVEN+FAEVLTQIY IVSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 381 SMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCS 418
           S+EAGD A +    P KG+KI++  DVSAVKK GCCS
Sbjct: 183 SVEAGDDAGSG---PGKGEKINIKDDVSAVKKGGCCS 216

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BLAST of Csor.00g161030 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 4.0e-96
Identity = 176/219 (80.37%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           M GYR +D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT++LNVD+K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFEN  RWL+ELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VML+GNKSDLRHLVAV TEDGKSFAE+ESLYFMETSALEATNVEN+F EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 419
           +++EAGD  +++  +PSKG  I+V +D S +K+ GCCS+
Sbjct: 181 RAVEAGDSGSSSG-LPSKGQTINVKEDSSVLKRFGCCST 218

[Close]

BLAST of Csor.00g161030 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.5e-95
Identity = 181/219 (82.65%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L VD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFENV+RWL+EL++HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHL+AV TEDGKS+AE+ESL FMETSALEATNVE++FAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 419
           K +EAG+     A+VP KG+KI+V  DVSA+KK GCCS+
Sbjct: 181 KQVEAGED--GNASVP-KGEKIEVKNDVSALKKLGCCSN 216

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BLAST of Csor.00g161030 vs. NCBI nr
Match: KAG6583942.1 (Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 808 bits (2086), Expect = 1.49e-294
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0


Query: 1   MITGKLLMADTGAGDGAEDSIAVIIMWGMGGDEAATTEVVLRGETGVGFIAGSRRRRAAF 60
           MITGKLLMADTGAGDGAEDSIAVIIMWGMGGDEAATTEVVLRGETGVGFIAGSRRRRAAF
Sbjct: 1   MITGKLLMADTGAGDGAEDSIAVIIMWGMGGDEAATTEVVLRGETGVGFIAGSRRRRAAF 60

Query: 61  WESGEEEPVDVEASGLEDGEMEDRRRRRRRRGSKVRIAVEFGHWRQFNSLLEPKKRRPIS 120
           WESGEEEPVDVEASGLEDGEMEDRRRRRRRRGSKVRIAVEFGHWRQFNSLLEPKKRRPIS
Sbjct: 61  WESGEEEPVDVEASGLEDGEMEDRRRRRRRRGSKVRIAVEFGHWRQFNSLLEPKKRRPIS 120

Query: 121 IPKFEKETCSPPPLWSPAQHRPTRGLSHFQFTISRVSRKDPQKASTQRSSHSPFLFPHSN 180
           IPKFEKETCSPPPLWSPAQHRPTRGLSHFQFTISRVSRKDPQKASTQRSSHSPFLFPHSN
Sbjct: 121 IPKFEKETCSPPPLWSPAQHRPTRGLSHFQFTISRVSRKDPQKASTQRSSHSPFLFPHSN 180

Query: 181 QTSSSSSSSSSSSSEGGTVMAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE 240
           QTSSSSSSSSSSSSEGGTVMAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE
Sbjct: 181 QTSSSSSSSSSSSSEGGTVMAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLE 240

Query: 241 SKSTIGVEFATRSLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTF 300
           SKSTIGVEFATRSLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTF
Sbjct: 241 SKSTIGVEFATRSLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTF 300

Query: 301 ENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEAT 360
           ENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEAT
Sbjct: 301 ENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEAT 360

Query: 361 NVENSFAEVLTQIYHIVSKKSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 418
           NVENSFAEVLTQIYHIVSKKSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS
Sbjct: 361 NVENSFAEVLTQIYHIVSKKSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 418

[Close]

BLAST of Csor.00g161030 vs. NCBI nr
Match: XP_022927164.1 (ras-related protein RABA1c-like [Cucurbita moschata] >XP_022927165.1 ras-related protein RABA1c-like [Cucurbita moschata] >XP_023518969.1 ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >XP_023522873.1 ras-related protein RABA1c-like [Cucurbita pepo subsp. pepo] >KAG7019559.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1097), Expect = 3.56e-147
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 418
           KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS
Sbjct: 181 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 219

[Close]

BLAST of Csor.00g161030 vs. NCBI nr
Match: XP_023001179.1 (ras-related protein RABA1c-like [Cucurbita maxima])

HSP 1 Score: 422 bits (1085), Expect = 2.46e-145
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 380 KSMEAGDGAAAAA-TVPSKGDKIDVGKDVSAVKKAGCCSS 418
           KSMEAGDGAAAAA TVPSKGDKIDVGKDVSAVKKAGCCSS
Sbjct: 181 KSMEAGDGAAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 220

[Close]

BLAST of Csor.00g161030 vs. NCBI nr
Match: XP_038895845.1 (ras-related protein RABA1c [Benincasa hispida])

HSP 1 Score: 414 bits (1065), Expect = 2.51e-142
Identity = 212/219 (96.80%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 418
           K+MEAGDGAAA A++PSKG+KIDVGKDVSAVKKAGCCSS
Sbjct: 181 KAMEAGDGAAA-ASIPSKGEKIDVGKDVSAVKKAGCCSS 218

[Close]

BLAST of Csor.00g161030 vs. NCBI nr
Match: XP_004147386.1 (ras-related protein RABA1c [Cucumis sativus] >XP_008443508.1 PREDICTED: ras-related protein RABA1c [Cucumis melo] >KAA0057060.1 ras-related protein RABA1c [Cucumis melo var. makuwa] >KGN65606.1 hypothetical protein Csa_019938 [Cucumis sativus])

HSP 1 Score: 409 bits (1051), Expect = 3.36e-140
Identity = 210/219 (95.89%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 418
           K+MEAGDG AA A+VP KG+KIDV KDVSAVKKAGCCSS
Sbjct: 181 KAMEAGDGTAA-ASVPPKGEKIDVSKDVSAVKKAGCCSS 218

[Close]

BLAST of Csor.00g161030 vs. ExPASy TrEMBL
Match: A0A6J1EN46 (ras-related protein RABA1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434098 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 1.72e-147
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 418
           KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS
Sbjct: 181 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 219

[Close]

BLAST of Csor.00g161030 vs. ExPASy TrEMBL
Match: A0A6J1KLZ9 (ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111495392 PE=4 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 1.19e-145
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 380 KSMEAGDGAAAAA-TVPSKGDKIDVGKDVSAVKKAGCCSS 418
           KSMEAGDGAAAAA TVPSKGDKIDVGKDVSAVKKAGCCSS
Sbjct: 181 KSMEAGDGAAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 220

[Close]

BLAST of Csor.00g161030 vs. ExPASy TrEMBL
Match: A0A5A7UPM0 (Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002480 PE=4 SV=1)

HSP 1 Score: 409 bits (1051), Expect = 1.63e-140
Identity = 210/219 (95.89%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 418
           K+MEAGDG AA A+VP KG+KIDV KDVSAVKKAGCCSS
Sbjct: 181 KAMEAGDGTAA-ASVPPKGEKIDVSKDVSAVKKAGCCSS 218

[Close]

BLAST of Csor.00g161030 vs. ExPASy TrEMBL
Match: A0A0A0M076 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G469730 PE=4 SV=1)

HSP 1 Score: 409 bits (1051), Expect = 1.63e-140
Identity = 210/219 (95.89%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 418
           K+MEAGDG AA A+VP KG+KIDV KDVSAVKKAGCCSS
Sbjct: 181 KAMEAGDGTAA-ASVPPKGEKIDVSKDVSAVKKAGCCSS 218

[Close]

BLAST of Csor.00g161030 vs. ExPASy TrEMBL
Match: A0A1S3B7Q9 (ras-related protein RABA1c OS=Cucumis melo OX=3656 GN=LOC103487076 PE=4 SV=1)

HSP 1 Score: 409 bits (1051), Expect = 1.63e-140
Identity = 210/219 (95.89%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 418
           K+MEAGDG AA A+VP KG+KIDV KDVSAVKKAGCCSS
Sbjct: 181 KAMEAGDGTAA-ASVPPKGEKIDVSKDVSAVKKAGCCSS 218

[Close]

BLAST of Csor.00g161030 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 386.0 bits (990), Expect = 4.0e-107
Identity = 198/219 (90.41%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVE WL+ELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAV TED KSFAEKESLYFMETSALEATNVEN+FAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 419
           K+MEA   A+ +A VPSKGDKID+GKDVSAVKK GCCS+
Sbjct: 181 KAMEA---ASESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Csor.00g161030 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 376.7 bits (966), Expect = 2.4e-104
Identity = 194/219 (88.58%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHLVAV TED KSFAE ESLYFMETSALE+TNVEN+F+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 419
           K+MEAG+    +  VPSKG+KIDV  DVSAVKK GCCS+
Sbjct: 181 KAMEAGED---SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of Csor.00g161030 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-96
Identity = 181/219 (82.65%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L VD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFENV+RWL+EL++HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VMLVGNKSDLRHL+AV TEDGKS+AE+ESL FMETSALEATNVE++FAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 419
           K +EAG+     A+VP KG+KI+V  DVSA+KK GCCS+
Sbjct: 181 KQVEAGED--GNASVP-KGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Csor.00g161030 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 336.3 bits (861), Expect = 3.6e-92
Identity = 167/219 (76.26%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MAGYRA+++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT++  V+ K
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRH+TFEN  RWLRELR HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           VML+GNK DLRHLVAV TE+ K+FAE+ESLYFMETSAL+ATNVEN+F EVLTQI+ IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGKDVSAVKKAGCCSS 419
           +S+   DG   +A +P KG+ I+V +D S +K+ GCCS+
Sbjct: 181 RSV---DGGGESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of Csor.00g161030 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 336.3 bits (861), Expect = 3.6e-92
Identity = 171/221 (77.38%), Postives = 195/221 (88.24%), Query Frame = 0


Query: 200 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 259
           MA YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++VD K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 260 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 319
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 320 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 379
           +M VGNK+DLRHL AVSTED K+FAE+E+ +FMETSALE+ NVEN+F EVL+QIY +VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 380 KSMEAGDGAAAAATVPSKGDKIDVGK--DVSAVKKAGCCSS 419
           K+++ GD  AA      KG  I+VG   DVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAAL----PKGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of Csor.00g161030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK68	5.6e-106	90.41	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]
Q9SN35	3.4e-103	88.58	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]
P40393	2.4e-101	86.64	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]
Q40194	4.0e-96	80.37	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q39222	1.5e-95	82.65	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]

BLAST of Csor.00g161030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583942.1	1.49e-294	100.00	Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022927164.1	3.56e-147	100.00	ras-related protein RABA1c-like [Cucurbita moschata] >XP_022927165.1 ras-related...	[more]
XP_023001179.1	2.46e-145	99.55	ras-related protein RABA1c-like [Cucurbita maxima]	[more]
XP_038895845.1	2.51e-142	96.80	ras-related protein RABA1c [Benincasa hispida]	[more]
XP_004147386.1	3.36e-140	95.89	ras-related protein RABA1c [Cucumis sativus] >XP_008443508.1 PREDICTED: ras-rela...	[more]

BLAST of Csor.00g161030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EN46	1.72e-147	100.00	ras-related protein RABA1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434098 PE...	[more]
A0A6J1KLZ9	1.19e-145	99.55	ras-related protein RABA1c-like OS=Cucurbita maxima OX=3661 GN=LOC111495392 PE=4...	[more]
A0A5A7UPM0	1.63e-140	95.89	Ras-related protein RABA1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0M076	1.63e-140	95.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G469730 PE=4 SV=1	[more]
A0A1S3B7Q9	1.63e-140	95.89	ras-related protein RABA1c OS=Cucumis melo OX=3656 GN=LOC103487076 PE=4 SV=1	[more]

BLAST of Csor.00g161030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45750.1	4.0e-107	90.41	RAB GTPase homolog A1C	[more]
AT4G18800.1	2.4e-104	88.58	RAB GTPase homolog A1D	[more]
AT1G16920.1	1.1e-96	82.65	RAB GTPase homolog A1B	[more]
AT1G06400.1	3.6e-92	76.26	Ras-related small GTP-binding family protein	[more]
AT5G60860.1	3.6e-92	77.38	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 351..373 score: 39.68 coord: 213..234 score: 55.22 coord: 254..276 score: 52.53 coord: 316..329 score: 54.65 coord: 236..252 score: 36.77
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 213..376 e-value: 8.3E-110 score: 380.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 218..416 e-value: 5.4E-7 score: 39.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 210..376 e-value: 6.2E-25 score: 98.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..198
None	No IPR available	PANTHER	PTHR24073:SF1151	RAS-RELATED PROTEIN RABA1C	coord: 200..418
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 200..418
None	No IPR available	PROSITE	PS51419	RAB	coord: 208..416 score: 35.502354
None	No IPR available	PROSITE	PS51420	RHO	coord: 206..377 score: 10.597731
None	No IPR available	CDD	cd01868	Rab11_like	coord: 210..374 e-value: 2.24412E-128 score: 365.344
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 215..372 e-value: 2.2E-12 score: 38.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 214..374 e-value: 1.2E-60 score: 203.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 205..418 score: 16.228765
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 211..369 e-value: 3.8E-38 score: 128.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 205..416 e-value: 1.6E-70 score: 238.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 208..380

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g161030.m01	Csor.00g161030.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding