Csor.00g160300 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g160300
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr13: 8721881 .. 8722159 (+)
RNA-Seq ExpressionCsor.00g160300
SyntenyCsor.00g160300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGAGCGCAAGGTTTGTTTGAAGGAAGAATTGAGAATTAAAGATGAAAGGGGGTGGTGGTGGTGGTGGTGCACATTGGAAGGCTCAAATTCTATGATTGAGGAGGAAGAGGTGGGAGAAAAGAGGAGATGGTTGGCGCAGTGGCAGTGGGCAGAGAGCCTCTCTCTCAAATGTCGTATCGCTATCAGAACTTGTTGCTGGGCCGATGCTGCTGCTGCTGCTGCTGCTGCTGGTATACAGCACCCGTTTGAAACGGTAACTCCCAAACCATTATAA

mRNA sequence

ATGGTAGAGCGCAAGGTTTGTTTGAAGGAAGAATTGAGAATTAAAGATGAAAGGGGGTGGTGGTGGTGGTGGTGCACATTGGAAGGCTCAAATTCTATGATTGAGGAGGAAGAGGTGGGAGAAAAGAGGAGATGGTTGGCGCAGTGGCAGTGGGCAGAGAGCCTCTCTCTCAAATGTCGTATCGCTATCAGAACTTGTTGCTGGGCCGATGCTGCTGCTGCTGCTGCTGCTGCTGGTATACAGCACCCGTTTGAAACGGTAACTCCCAAACCATTATAA

Coding sequence (CDS)

ATGGTAGAGCGCAAGGTTTGTTTGAAGGAAGAATTGAGAATTAAAGATGAAAGGGGGTGGTGGTGGTGGTGGTGCACATTGGAAGGCTCAAATTCTATGATTGAGGAGGAAGAGGTGGGAGAAAAGAGGAGATGGTTGGCGCAGTGGCAGTGGGCAGAGAGCCTCTCTCTCAAATGTCGTATCGCTATCAGAACTTGTTGCTGGGCCGATGCTGCTGCTGCTGCTGCTGCTGCTGGTATACAGCACCCGTTTGAAACGGTAACTCCCAAACCATTATAA

Protein sequence

MVERKVCLKEELRIKDERGWWWWWCTLEGSNSMIEEEEVGEKRRWLAQWQWAESLSLKCRIAIRTCCWADAAAAAAAAGIQHPFETVTPKPL
Homology
[Close]
BLAST of Csor.00g160300 vs. NCBI nr
Match: KAG6584015.1 (hypothetical protein SDJN03_19947, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201 bits (510), Expect = 3.96e-65
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MVERKVCLKEELRIKDERGWWWWWCTLEGSNSMIEEEEVGEKRRWLAQWQWAESLSLKCR 60
          MVERKVCLKEELRIKDERGWWWWWCTLEGSNSMIEEEEVGEKRRWLAQWQWAESLSLKCR
Sbjct: 1  MVERKVCLKEELRIKDERGWWWWWCTLEGSNSMIEEEEVGEKRRWLAQWQWAESLSLKCR 60

Query: 61 IAIRTCCWADAAAAAAAAGIQHPFETVTPKPL 92
          IAIRTCCWADAAAAAAAAGIQHPFETVTPKPL
Sbjct: 61 IAIRTCCWADAAAAAAAAGIQHPFETVTPKPL 92

[Close]
BLAST of Csor.00g160300 vs. NCBI nr
Match: KAG7019633.1 (hypothetical protein SDJN02_18596, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 163 bits (412), Expect = 4.75e-49
Identity = 78/84 (92.86%), Postives = 79/84 (94.05%), Query Frame = 0 

Query: 11  ELRIKDERGWWWWWCTLEGSNSMIEEEEVGEKRRWLAQWQWAESLSLKCRIAIRTCCWAD 70
           +LRIKDERGW WWWCTLEGSNSMIEE EVGEKRRWLAQWQWAESLSLKCRIAIRTCCWA 
Sbjct: 92  KLRIKDERGWGWWWCTLEGSNSMIEEGEVGEKRRWLAQWQWAESLSLKCRIAIRTCCWAA 151

Query: 71  AAAAAAAA--GIQHPFETVTPKPL 92
           AAAAAAAA  GIQHPFETVTPKPL
Sbjct: 152 AAAAAAAAAAGIQHPFETVTPKPL 175

The following BLAST results are available for this feature:
BLAST of Csor.00g160300 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g160300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6584015.13.96e-65100.00hypothetical protein SDJN03_19947, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7019633.14.75e-4992.86hypothetical protein SDJN02_18596, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g160300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g160300 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g160300.m01Csor.00g160300.m01mRNA