Csor.00g156650 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g156650
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr19: 7339493 .. 7340390 (+)
RNA-Seq ExpressionCsor.00g156650
SyntenyCsor.00g156650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTTCTCTCATGGTGGAAAGGTGGTTCTGCGCCATCGGAGTCCAATTCGAAGCCGCAGCCTCCTCCGAAGAACGTCTCTCAGCCGGCGGAAGTCCCTGGCCTTAACGGTGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACCGTCTTCGAGTTCGGCTCCGTTTCCGCTTCATCCGATAGTGTCACCCTCACCGGTTACTGCCCCGTCTCCGACGATCTCGAGCCCTGCCGCTGGGAGATTCTGCCTGCAAGCGGCTCCGACGCGCCTCTTTTTCGCGTCGTCTTCTGAGGTGCTTGAGATGTAAGTAAAATTAAAATCTATAAACGATTATTCTAGTAGAACGAAGCCTGCTAATTACGATTTATTTGATTTTTTCTTTCGCATATCGTGATTTATCTTTCGGAAATTGTTGAATCTTCTTCTTCGTGGATTGGTTTTCTATTTGCTTCTTCTCACAATCTGTGCAATCCGTAATCATATATTTGATCATACAAAAAGAAAATTACTGCATTTGCATTTGCATTTCCACTTTTGTTCCAAGTCGAAACTGTTTAGTTCATCTTTTGAATCATGGATTTGGGGCTTAGGAGTCGATTTCTTCACTTCTGAATCTATGCAGGTTAGGGTTTAGAAATCATATTAATAAAATCACTTTTATCCATCCAAAATCACTCCAAAAACATGTTTAAAATTGCTATCAAACATCTTTGTTTTTGTGTTCGAGAAAATTTGTTTCAAAATCAATACCATTTTGTGCTTTGATTTGTTTTGGCCAAGTTGTGAATGTAGTTGAAATTACAGGTTTATGGAAGCCACAAGAATATGCCTCAATGATTATTGGTTTTGTTGGCCAGAAGCTTCTTGGAATCATTCAAGAGAGTTGCAGTAA

mRNA sequence

ATGGGTCTTCTCTCATGGTGGAAAGGTGGTTCTGCGCCATCGGAGTCCAATTCGAAGCCGCAGCCTCCTCCGAAGAACGTCTCTCAGCCGGCGGAAGTCCCTGGCCTTAACGTGTCACCCTCACCGGTTACTGCCCCGTCTCCGACGATCTCGAGCCCTGCCGCTGGGAGATTCTGCCTGCAAGCGGCTCCGACGCGCCTCTTTTTCGCGTCGTCTTCTGAGGTGCTTGAGATGTTTATGGAAGCCACAAGAATATGCCTCAATGATTATTGGTTTTGTTGGCCAGAAGCTTCTTGGAATCATTCAAGAGAGTTGCAGTAA

Coding sequence (CDS)

ATGGGTCTTCTCTCATGGTGGAAAGGTGGTTCTGCGCCATCGGAGTCCAATTCGAAGCCGCAGCCTCCTCCGAAGAACGTCTCTCAGCCGGCGGAAGTCCCTGGCCTTAACGTGTCACCCTCACCGGTTACTGCCCCGTCTCCGACGATCTCGAGCCCTGCCGCTGGGAGATTCTGCCTGCAAGCGGCTCCGACGCGCCTCTTTTTCGCGTCGTCTTCTGAGGTGCTTGAGATGTTTATGGAAGCCACAAGAATATGCCTCAATGATTATTGGTTTTGTTGGCCAGAAGCTTCTTGGAATCATTCAAGAGAGTTGCAGTAA

Protein sequence

MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNVSPSPVTAPSPTISSPAAGRFCLQAAPTRLFFASSSEVLEMFMEATRICLNDYWFCWPEASWNHSRELQ
Homology
BLAST of Csor.00g156650 vs. NCBI nr
Match: KAG6571825.1 (hypothetical protein SDJN03_28553, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 220 bits (560), Expect = 2.60e-72
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0

Query: 1   MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNVSPSPVTAPSPTISSPAAGRFCL 60
           MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNVSPSPVTAPSPTISSPAAGRFCL
Sbjct: 1   MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNVSPSPVTAPSPTISSPAAGRFCL 60

Query: 61  QAAPTRLFFASSSEVLEMFMEATRICLNDYWFCWPEASWNHSRELQ 106
           QAAPTRLFFASSSEVLEMFMEATRICLNDYWFCWPEASWNHSRELQ
Sbjct: 61  QAAPTRLFFASSSEVLEMFMEATRICLNDYWFCWPEASWNHSRELQ 106

BLAST of Csor.00g156650 vs. NCBI nr
Match: XP_022952897.1 (uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothetical protein SDJN02_26421, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 80.5 bits (197), Expect = 3.96e-17
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN 37
          MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN 37

BLAST of Csor.00g156650 vs. NCBI nr
Match: XP_023554244.1 (uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 78.6 bits (192), Expect = 2.27e-16
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN 37
          MGLLSWWKGGSAPSESNSKPQPPPKNVSQP EVPGLN
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPPEVPGLN 37

BLAST of Csor.00g156650 vs. NCBI nr
Match: XP_022972011.1 (uncharacterized protein LOC111470658 [Cucurbita maxima])

HSP 1 Score: 77.4 bits (189), Expect = 6.45e-16
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN 37
          MGLLSWWKGGSAPSESNSK QPPPKNVSQPAEVPGLN
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLN 37

BLAST of Csor.00g156650 vs. NCBI nr
Match: XP_022157409.1 (uncharacterized protein LOC111024112 [Momordica charantia])

HSP 1 Score: 70.1 bits (170), Expect = 4.70e-13
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN 37
          MGLLSWWKG +APSESNSKPQPP  NVSQPAEVPGLN
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLN 37

BLAST of Csor.00g156650 vs. ExPASy TrEMBL
Match: A0A6J1GLN4 (uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC111455443 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.92e-17
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0

Query: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN 37
          MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN 37

BLAST of Csor.00g156650 vs. ExPASy TrEMBL
Match: A0A6J1I4S4 (uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.12e-16
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN 37
          MGLLSWWKGGSAPSESNSK QPPPKNVSQPAEVPGLN
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLN 37

BLAST of Csor.00g156650 vs. ExPASy TrEMBL
Match: A0A6J1DWE4 (uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024112 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.28e-13
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLN 37
          MGLLSWWKG +APSESNSKPQPP  NVSQPAEVPGLN
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLN 37

BLAST of Csor.00g156650 vs. ExPASy TrEMBL
Match: A0A0A0LF75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910650 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.74e-12
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0

Query: 1  MGLLSWWKGGSAPSESNSKP-QPPPKNVSQPAEVPGLN 37
          MGLLSWWKG S PS+S SKP QPPPKN+SQPAEVPGLN
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPPKNLSQPAEVPGLN 38

BLAST of Csor.00g156650 vs. ExPASy TrEMBL
Match: A0A5D3E692 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004090 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.24e-10
Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 0

Query: 1  MGLLSWWKGGSAPSESNSKP-QPPPKNVSQPAEVPGLN 37
          MGLLSWWKG S PS+S SKP QPP KN+SQPAEVPGLN
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLN 38

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6571825.12.60e-72100.00hypothetical protein SDJN03_28553, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022952897.13.96e-17100.00uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothet... [more]
XP_023554244.12.27e-1697.30uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo][more]
XP_022972011.16.45e-1697.30uncharacterized protein LOC111470658 [Cucurbita maxima][more]
XP_022157409.14.70e-1389.19uncharacterized protein LOC111024112 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1GLN41.92e-17100.00uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC1114554... [more]
A0A6J1I4S43.12e-1697.30uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658... [more]
A0A6J1DWE42.28e-1389.19uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A0A0LF757.74e-1284.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910650 PE=4 SV=1[more]
A0A5D3E6921.24e-1081.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g156650.m01Csor.00g156650.m01mRNA