Csor.00g156590 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g156590
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	la-related protein 6B-like
Location	Csor_Chr19: 7273621 .. 7288842 (+)
RNA-Seq Expression	Csor.00g156590
Synteny	Csor.00g156590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCAACATTCTTCCTCCTCTTCCCTTTCCCCTTCCCAATCCGATCCATCTCTATCTCGCAACTCTTCTCTCAGTCGTCTCAACGCGCAGGCTCCTGAGTTCGTTCCCACTCGCCCATCCTCTCGTTCCGATCTACAACAGCCGCCGCACTCCGCCGCTGGCCCTGCTCCTCCTCCGCCCAAGCAATCGCCTCGGATTCTGATCCCTTCTCCTCCGCCTCCTCCGCCGGCTATGATGCATGTTTATCCTCCCCCTCCCCCGGGATCTCCCTTCCATGTTCCCATTCAGAGCCCTGTCCCTGTCCCCACTCATGTGGTTTCTCTTCAGAATCATCACTATCATCGTCATCATCGTCACCACCATCATTCCCATCATGTTCCTGTGCTTTATCACCCTCATAATCCTCAGTATTATGCCGACAATGGCGGATTTCATGACCCGGACACGGTCGTGCAGCAAGCTCAGAAGCCTCAGGTTGAGACTGATTATGCTGCTCCATCTAGAAGTAAACTCGCTGAGGACGTTTCTTTAAAGCTTTTGAATCAGGTTGCTTTCTTCTTTTGACTAGATCCTCTATGTTTATTCTCTTCTCTCTATGTCAACAGTTTGTTATCTGCTTGCTTCTTCAATAATTACTTTGGTATGAAGCTGAGTTTCATATTCATCTGTCGAATTTGTATGGATTTGCTGCGTGGGTTAATTTATGAAGCACCGTAACTTATGGAGCTATTGTGTTTTGATCCAGCGAATTCTGTTGTTTCTTTAGGCACACATTGAGTTAGCCGGAAGTCATGGTTACTTGAAAGGTCTTAGAACTCGCTGGGAATTTTGTTCTGGATTCCCCTTTCCTGTTGTACGAATATTGTCGATATCTGCAAAATTTCTGTTTGCTTGAGACTGTTGATAAATGGTAAACTAGGCATAGCTAAATATGATGGTCAAAAAAATTGGAAACCAACTATTTATTGCATACGACATTGAACAGACACAAAAGGTTCATTGGTCCTCATGTGCACCGAGCATGGACAATTCCCGTTCGATCAATTTTCGTAGGATAGGAGCTGTGGAGACTCTCTCATGTCCAAAGTGTTGCTGTTGGACGTGTATGCATTGATACACTTCAAACCCATGTCTACATGTGATTTGGAGCAGGTTTTTCATTTTGTTTTTTTGTTAACTTGTCCAAATTTCAGACAATTTGGGACTCACAAGACGAATTGGTAGAGACATGTTGAGCACACTCTAGGCATGTGGGGGCATTTTGAGAAGAAAAAAAAAGAAGAAGAAATTATGTTTAAGGTGCTGGTGAAAACCTAGGTTTAGGAAAACTGTGTGGGGGACAGGACTTGGGGAATAGGTTTGGGACATCATTGAAGCCCATGAGTTTATCCAATAAACTCCAAGCTTGGCAAACTAACGTAGTAAACATGTCACCTGAATCTAAACCCTCACTCAAAACACATCCCTATTTACCCCCTAAATGACGATGGCATCTAGAATCCAAGATTATATAATTACTTAAATACGCTGATGTTTTGGAAGGCTCAATTGGTTTTTTGGGATGATAGTTAACATAATAACCACCATAACACACACTTTGGATCATTTATCTACTGAAGAAAACTATGTTGATAGCTGGAGGACGACTTTCCATTGAAGAATATCCATAAAACTAATTGTTTGGGGGCAAGTCACATGAAAGGTGATGTCATGAAAGGACACTTTAAAGCTGTCAGATGGATATTCAGTCGGAAGTGAATATTCTACATTTATTATATAGCACTCAGAAGCGATGATTTGAGTAGGTACCTAATGACGTCTCTTCTGTTCCTATGACCTGACACTAAGTCAAAAAAATGGAAATGGAAGAGGGCTGTGGAACAATGGATAAAAGTACTTGGATATCCTTATTTTGAAGTTGCTTTAGTGGTGAACTGTCCTTTCTGTCTCAAGGTTATGATGTAATTCTTAAAACAAGGAGTTGCATCACTTATTTGTCTTCTTAGTCTGGAGGTGCTGCTCCAATCGTTTGTATAACTGTGTGGATGTTGGTATCGTTGAAAATAATTAAACTACTGCCCTTCGTTACTGGCAAACTACTGCTTACATTTGGAAATTGATTAAAAATTAAATCTTCTTGTCATCAATAAATACCAAAGCAGCTAGTAATTGTCGTCTTAAGGATCTTGAAGCTGAAATTTTCCCAATTATAGTACTTGCTGTGTCAATAAAATCCAACATTTTGAGGTTTTTGTCATTCAGTCCCTGGCTTTTACTTCTGTTGTTATTGAAGTAAATTTATTTTGGAGGTTACTGATGATTGTCAATTTTAGTTAGTTGGATTATTCCTTAAAGCGTTTGGTGCTCACTATTCCTTCTCAGCAAAGATCAGTTTAAATATTGTGTTAGTTTTGGCATTTCTCTTTGATGACTTTGGAATCAGAAATTTCAATGTTTGTGACCATCAGTTTAGGATATTACTTTTCTACGAGTATGCTTTGAAATTAGTAGAAAGGCATATAAGTTTGCAGGACATTTACAGTCGTTATTAATTAAAAAGTTGAATGGTTGATTTAGTAGGTTAGGTACTTCTGCTATGTTTTCCAATTCCCAATATGAATTGGATATTACTCTCTATGCCTACTTTTTATTTAACCTTATTTGCTTATTGAATTCTTTGTAAAATCATGGTTTTTAGGTGGAATATTATTTCAGTGATTTAAATTTGACAACAACTGATCATTTGATGAGGTTCATCAATAAAGATCCCGATGGATATGGTAAGATCCTCTCTTGGCATCTTTATTTGAATTCCGTTAATGTGTGGAACTCCTGCTTTTACCATCCCACCACAGGTGGATTCTTTTGATTAAATTTACAACATAATGAAAATTTAGAATGACCTCTTAGAATTAGACAACCGAACTTCTTTTTCTATCTCTCCCTCCAAAACACTTCACCTGGTAAGGTCCATTTTAATTCAGTGCCCATATCGGTTGTTGCATCATTCAAGAAGATTAAGGCTCTCATCAATAGTCACTCTCAGCTAGCCAATATTTTACGGAACTCTTCTAAGCTTGTGAGTATTTTATTTGTGATATTGTAAGCATCTTTCTTTACCATTGTTGTCCTTGAGTTATTCTCAATTCTCTTTCTGGTTGTCCACCTCCTGTTTTTTGTTTCAATATGCTGTAGATGGTTAGTGAAGATGGAAAGAAAGTCAAACGTAAGCAACCACTTTCTGAGTCAGATATGGAGGAGCTGCAAGTAGGGTTTGTTTATTTGTTTGTTTTTATTTTTAAAATAACGTTTTAATCAATTTTGTAAAAGTAGTTATACGTATATATTTTATTTTTTAATAAAAATTTAAAACCTTGTGCATTGGTTCTGTTTCATGTTACAACATGTGGGATGGTTCCATCCCAGTGTCCACAATATGTTATTGACTTACAAACCAATGCATTTAATCCTTGCATGCTGCTTGTTTTACTTGCCCACTGTCAGTCTCGCATAGTAATTGCGGAGAACTTACCTGAGGATCATTGCCACCAAAACCTCATGAAGATATTTTCTGCTGTTGGGAGGTACAAGTGTTGAATGATTTTGTTTGCATGTTCTTCAGCAGCTTGCTAAAGTTATATTGAATTATCATGCTGCTTTCTTCTTTGGCAGTGTTAAGAATATTCGAACTTGTCAACCTCAAATCTCAGATAGTGGAGCTTCCTCAACAGCTAAATCAGCAAAAGCTGATGGAATGCATTACAGTAGCAAGGTATACTTATTTTCTGTAGCATACGGTATCTGAGCTTTTCTGGTGCAATCTTTTTTCTCCATTAACCTCTATCATTGTTGGGACAATGTATTATTTCCTTAAAGTCTGTTGTATGGGTTATCCAAAATCTCCACAAGGACGTGTTGCAAAATCAGGCGGGGAACGCTGGTTCAAACACATGAGAACTTGTTCCAAATCACGTGGGGAACCCCTGTTTGAAATGGGTTGAAGTAAATGAACAGGAGAAACTTTTTCCCCTATCTGATTTTCAGGAACAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTGGCTTTCATTCAAAATTTTCTACTCAAATACGGGGGAGAGGTTGAGGCCACAACACTGCCAACAATATTTGAGTTGCTCATCTAAAGAGCAGACTATGACGATATTCTTCTAATGAGGTTTCTAGTAGGTCTTGTATATAAGTGTTGTAGATTAAGATATCATCATAGAACATTGATGCAAACTGTCGTAAGTAAGTCTCTAAGATATCCTTCATTAGAGATAGAAAAGGAGAGGGAGCATTGTGCCAACCAAAAGGCATAAACAAAAATAGTTAGACTTGAGATCAATCTTAAACACTCTAGGACCAAATAACTCATCAAGCAATTCATCCACTTCGGGAATAGGGTTCTTATTTGGGATAGTCGTATGGCTAAGTTTGTTTGCAACATATCTCATCAAATCTCTGTTTGATAAGAACCATTTCTTGCCTGTTCCGCAAAAGATAAACCAACATCCTCCGTTATTTTCTCAATCTCTTTTCTTTGCCTGAACTACCATGGGGATTTTGATTCTACCCTCGATGATTCTTTCAAGTCATTTTTCAACCAATTCTGGAACTCCATCTCATAAAGCTAGAAATTTCTAAATCAAGATGAAGATGGTTCCTATATTAGGTTGCCAACTTCTAACATCCAAAAGGAATGGTTTATCGAAGACTTCGCCAACATATTCGGTTGTAAAAAGATTGAATGGCCAAATATGTTGTAATGCCCCATGCCCAGAATTCAGAATTCAGAATTCGAATTCAAATTCGGCACCCGATGGCCCTAGCATTCCCTTGCATCACCAACGACATGGTCGCTCAACATAGAATTGCTCCAAGTAAAGCACACTGAACTATGAAGTTTCTATGATTGAGCCACTGAAAAGGAAGGTTCCCCTTGTTGGTATAGGTAGTAATTTTCATTTACTTTAAGACTTTCTTAGTCATTCTATTCTCAGGATTGCTCTCATTCGGATATGGTCTCAATTCATTCATGTACCCCTCTTTTACTCGAGTGTCAAATGCCTTGGTTTGTCCCCGAACCACATTTTATTGGGAGAGGTATCGCTCTGATACCATTTGTAATGCCCCATGCCCAAGATTCAGATCAGGATTTGGAATCCGGATTCGACACCTGATGGCCCTAACATTTCTTTACCATCGTTTGTGACATGGTCACGTTACCTACTCCTCGTTTCTTAAGAGTGAAGGCTACCTTACAGACCAATATGAGTCCTTCTAGCATGCTTTGTCCTCTCACACATGCATCTTAGGAACATTCTTAGAAATTCACCCCACGTAAAATTGCTCCAAGTAAAGCACGTTTAACTATGGAGTTTCTATGATTGAGCCACCAAAAAGGAAGGTGTACCTTGATGGTATAGGTATAGGTAGTAACTTTCATTTCCTTTAAACCTTTCTTAATCATCCTATCTTCAAGGTCGCTCTTATTCGGATGTGGTCTTGGTTCATTCATGTACCCTTCCTTTACTCGAGTGTCACATATGTACCTAGGATTGCTCTTAAATGGGAATCATAAATCCTTCTCCTTCTGGAAGACCATTATTGAAAAAATAGAAAGAAGATTATCAACATGGTCATCATGTTATACTTCAAAAGGCAGAAAATCACCTTAATACAAGCCACACTATTCAACCTTCCCACTTGCTACATATCTCTATTCAAATTACCTAGAAAAGTGGCTACAAAAATAGAAAAGATTATTCATAGATATATATAGAAAGATGACCTACGTCTTGTTTGATGGAATTCCATAAACCTCCCGATGAATAAAGGAGGCATTGGTCTATTTCCAATAAAGAGCACTAAAACATCATCACCAATTGTATTTGCCATAGGGTGGGTGCTGGGGGAAGCATAGTTGTAACGACCTGTTTTTCGATGCCTCGAATCATGGTCGCCACGTAGTCTCAAGAGTAAAAAGGGCGATAAAATCTTTCAAATTGAAATGCTGGAGACAAGGAAAAGTTTTAATTTAAAAATGCATTAAAACTAATATAAGGTCAATTAAAAGTACAAAACAACGTCCGTGGAGTTAGTCCAAAATAGTTTACATAAAATACACCAAAAACAACATTTAAAGATAATAAAATGACAAGAAAGGAAGACGACTCGATCTAAAGGCACCCTTGTAGCTGCACCACTTTGCACTCTTTTCCCCTCGACCGTGATCTCCACTCCTAAAAAAATAGAATAACATGGGATGAGTATAAAATACTCAGTAAGCAGCCAACTTTTAGGCTCTCATTAGACTTAGTACTTACAATAATTCCTTAAGTATGTGCTCACATGTTGACTCTAGTGTTAACCATTACCATGGTTACCATCTATGCTAACCTTATAGGCTTATATGTACCGAGGCCCTATACACTCCTGCACTAGGGTGCATAACTAAGCCCCTCGGGTCATAATGTAGGGTTAGGTTGTACTCAACTTGTTGTTTATATCTCCCAAAGTCTACCCTTAACCTTGTGCTACTAGCACATGAGTCAACTTGCCGTATGGCGAGTTCGTGGGTAAGTCTCGTGTGTATGAGGTAATTTGTGCAATATATGCAGGCTAGTACTATAATCGCCTGCACCTCATACGAGCTATCTAAAAGGTGCACCCTGGTAGCATGCTCTCTACCGCTCCTGGCGTCCACTGTAGGTGACAACTAACCAATAGGTACCAAGTAGACCCTAACCATACTATGAAAGTTCACAATTATTGGTTGTGCCCCAATTGTCCCTACTTGATTGTCTGGTCACCCAAGAATGCCAATGGGACCCAATGTGGGTTCTAAGACTAAAGGATGTGCACTAACCGTTCATAATCATGCATATTTATACCTATGCTCACTAGGACACATAACATATATCCAATAAAATATTCGGGCATACAAGGGTATGTAAAGGTTCCTAGGCTTAACTATAGACAACCTAATTAATTAGGTTTGTCGTCATGTTTTCTAATAAATATACATCTAGCTGAAATAGTCTCATTGTCATACTACCAAATAAGTATCTAACTTGATTAACTAGGTCTATCATCATGATTCCAATTGAGCATCCAACTTGATTAACTAAATTTATTAACATGCTTCCTAATGAATTTTGCCCATTGTCCTAATCGTCCCCTACAAGTATTACTTGAATAATCCATGTGGCTACTTACATATTTGTTGTCTTCCCGAGCTTGTTTCAGGTCTTCAAGAGTTTCCAAATTTCTAAAAAGTCCTCAATTAGGTCCATCGGGTCGGGGTCCAGATGGCGGGTTGGAGTCAACTAGGTGGGTCTGGTTAAGTCCTTTAAATCGAGTCAGGTTGGTTTCGGGGGTCTCGGGCGATTGGATCACTAGGTGAGGCGGTTACTCGAGTTGGATCAAGTGGGTTGGGTCACTATACAGTTGGGTCACTCAGGTCGGTTTAGCCCAGCGGGTCAACTTCTTTCTTCTTCCTCCCCATAACTATCTTTCTCTGTTCTATGCGATTTGCAGAGGCAGCGTTCCTTCCTTCCTTTGCTTCAGCTCTCGCCCATCCATCTTCATCTACGAGCAACGGGTCGTCCACGTGATCTGTATAACTTCGAGTTTCTCCTCTCTATGCACCATGGTTGTAGAGATGGACCTTTAAGTCGCAAGCTCTTTTGTTGGAATCTCTCTCGTGGTGTTGCCTAGACTCCATACTTCCCTCATACTCCCTCTCTCTTGATTTAAACACAATGGCACCCCAAATCTGCTGAAATCAAGAAGGAAATTGGGTAGGTGGCTGACTTGTCTCCTTTGTCCGCTCTCTGCCCCCTCTGTGCATCCTTTTCACTTTGGAGGTCGCTGACCATAGTGTACGACCAGCGGCTCCATATCGTCCTTTCTTTTTTCCATTATATCTATATACAGTTGTCATCGCTTCCCATCTTCATTTATTTCAGTTTTGTACTGACCCTTGGATTGAAAACACTAGGCTAGCCTTGCAATATCCACTTATGTATAGACTCTCTCATGACAAAATGATCACGATCAAAGAAACATGGAAAGATGCCAACAAATTTTGGGACTTGAAGTTTGGGAGGAACTTAAAGATAATGAAGCTGTGGAATGGGCAGAGTTAAGCCTTGACCTAGCCCCAATTGTGTTGTCTAAAAAAGCAGAGTTAAGCCTTTTTTGTATTGTCTGAAAAAGCAGACTTATTAAAATGGCTTCCTAGCGCTGAAGTGGTCTTCTCTTTGGAATCTTTGATGAAGGACATAGGGGAAAAGGCAAAAGCAATCAACCCCACACTAGCAAAGACAATATGGAAAGGAAATCACCCTAAAAAGGTGAAGATTTTCTTATGGAAAATAGCGCATAAAGCTATTAGAGCAAGTGAAAACCTACCAAAAAATAAAATAAAATAATAAATAATAATAATAATAATAATCATAATAATAATAATACTGTCCTACATGACTCTGTTCCCAAGTTGGTGCCTATTAGGTTAGAAAGACAATGAATCACAAAGCCATATATTTATGCTGCACATACCCATAATTTTTGGACAAGGATTCGCAATTTCTTTGGATGGTATCTCACTTTTCCCTACATAGGGTAAAGGAGTTATTGGACATGGCCTTAGCATATCATCCCCTCCAAGAATGCTAACTTTTACGAAGAGTATTCATGGAGGAGGCAAACTTTTACGAAGTTTTTCTGCAACATTGTGTACCTTGCTATTTGTTGGTGTAAATTGTCAAATACTTTTGCTTCCTATAGTCACACCTCCCTCATCTGGTCTTTTGTATCCATCATGGATAGCACATCCCTTTTGTAAATTTCAAACATCGGATTAAAAAAAAAAAAAAAAACTAGTTATGTAACCCTTAGTTCTTTGAAAATGATGGAGTTGGTCTCTCTCATATTTGATCAAGTAAAATATGAGAGATCGATTTAGTATACAATCTGCATATATTTTCATTGCCTAATCCCACAATGTTTTGATCTTCTTTTGGTTTTTGTCGCATCCCCCTGATTTTCATAGATGCTGGCAGTAAAATATATTTTCTGATGTTTGTAGATTAGCCTGTTTTATAGAATAACCGATGGGAAATTTTACTGTATAATCGATGCCTTATAAAATGTCCTATATCAATGGCCTTGTGAATAGCGATTAGTCATGGTACATTTGAGTAATATAACTTTTTTAGCCTTAAATAGGCTACTCAAACTACTGCTGAATATCAACGTCCATGACATTTTAAATTAACTACAATCTTTCTTATTCTTTATTCAAGGGAATAACATAATTCTCAACATTTTATGTTTCAGTTGCATGCATTCGTGGAATATGAATCAGTGGAGCTGGCGGAGAAGGCTGTAAGTGCTTTCAATTCCATTACGTATGAAAGTTTTTTCATTCTTGTAAAGGAGATTCAATGTAAAAGAAGTTGCATAATTTTTCAGGTTGCAGAATTAAATGATGAAGGGAATTGGAGAAATGCACTCAGGCTTCGTTTGATGCTTTCATGCCCGGTACTTAAACTAAGACTATACTTATTCCATGTATTTGATTTGGTTTCTGCTACATAGCTTAATATACTGTGTATCTTAATATACTGTGTACTGTATTTCCTGTGTTTTATTGTGTGTTGCACGGGTTTTTTATATTCTCTTATTTGAACTTAAAAGACAGAACGGTGAGTTGCCTTCTTTACATGTTTAAGCATTTTTTTTTTTATTTTATGTATACAAAAATTTATACTAGTTCCAAACCCTAAATTTGAAGCTTTGTTCTTGATTTATTTTCTTTCTTTGTTTTGTTTGTGCGTGTGTTTTAATTAAAAATTCATTGTTGTTCACAGTCAAAATCTGCTCTATCTCGTGGAAAGAAGGGACATAGTGGTGAGATGAACTGCAAAGATGATGAAACCTCTGAACAACCACGTATTGAGAAGCATGTAGACGATCTTTCTGATCAAGTTGACATTCATCTGCATGAACAAGTACAAGTGAACTCCCTCTAAGCTTCTTTAGATTCCTGGAAGCTTTAAATTAATGCACTCTCTCTTTAATTTTTCTTAAATTATTTTTAGTGGAAGGAGTGAAGAGAAGAATTGGATATTACTATGAAATCATGGATAGTTACGAATGAGAAAAGGGTTAATATATATGTCATCAGAGACAGAAAGGAAATAAAGGATGGAAAAATCATAAAAGATAAATTGTTCAGAGGGTGCGGAAGGTGTGTTGAGGGAAACAATAGATAATTTTTGCAAGATAAATTGTTCAAACTGAATGGAGTTGGCCCTAAGGGGGCGGTCAGGTTAAGTTGGGAAGCTTGAGGATTACAAAAAGGACTTCCAACTGTGGATATAAAAATTCATTGTTGAGATTTGATGGCTTGCAAAGAAGAAAAATAAATGTGGATGATCATGCAAAGAGGTCAAATGCCAGCTAAAGGTCTCTATTTCTGGCTCGAGGGTTAAACTACTGCTATTAAATTCTCTAACCTCATTGGCCTTTTTATTTTTTTATTTTTTTAATAAGAAACTGAGACATTGAGAGAGAAATGAAAGAATGTACAAGGGCATGCATAGAATAAAAGCCACACAAAAAAAGAGTCCAAAAGACTGCTGTAGAAGATTCTAATCTAAAAGAATGAAGTCTAACTTATAATTAAAAAAACCCTTGCCACTAGAGCTCATAAAGAGGCCGAACCTCCCACAGTTCCCCCTAAGACCTCTACCCACCTCTAAAATGTCTATCATTTATTTGAAGTTGAATCCCCCAAAGGACTGAGAAAAGGCACAATCCTAGGAATACTGTCCTTGACCCATAAAGAAGTTTGAGGTGGCTGCAGCACAGGAATAGAACCAATGTTTGAAAAGAATTTTTGAGGCTTACGCCTTGAGCATTGCTTTGGGAGAGAGGTTCAAGTTTCTAGCCTTGAAATTTGCACCGATACATGGATCTCTTGTTGGTCTATTGAAGAATAAAAGAATCAAGATCATAAACTTAGAAGTTAGAAAGGTATTTCAAAACATTGATTGAAAGAGAAGGGATAAAATCCAATCATTTTGGTTCAATCTTGTTGGAAATGTTCCAAGAAAGGCTGATGAATTTTGGGTGTAGTTACATGTCTGATTGAAGTGTGAGGACATTATATCCATGTAACCCACCTTCCGTTTATAGATGACGCCATCGTAGTCTACTCATCCTTTGTAGATTTTTAGAGCTTAACTGACAATCACCTTTAGCTCTGAATCTATTCAAGATTTCTCTGGACTTTGCATAAGTTTGGAGAGATCTACCATTTAGTGTATAATCTTGGCACTAGATCATACTTTTGTGGTGGTAGAAATGTTGAGTAGTATGGCTTTGAAACTGAAGAGTTCTGGTCGAAGGGGGGTGGATGTGCCTGCGGAATGGGTACTCTCTTGTTTGTATACGTTGTGTCAATATGAAGGAAAATTTAGCGAGTTGGTTAATTGAGAAATTTGTTCCTTAACAATTGGTAGTGGAGGTGTGATTGGGAACTTTGAAAGGGCGAATGGAGACTTGGCCAACCAAATCTTTGGGACGTTCTTTATTCAAACAGTTCAACAAAGTAGTTGCAACCAAATTGGAGTGTTTTCTATTAACTCCTGGTAGGAGGTTATAGTTCTATAATAATTGCCAGAGTAGTTTGTATTACTCTCCTATCTTGTTATTCATCATAGAAGTACATACGCCTATTTGTAATAAGAAAAGCTAACTAATTCTCTAGGGAATAGGAAACCATAAAGAAAAGGAAACAAAAAAGGAAAGTTAACTTATCTTATGGGGAATAGAAAAGGGACTGCCACCCCCTTAGCATGTTGCCACCAGAAGCAGAACCCCCTATTTCTTCCGACAAATGTACTTTCAAAGGGAGGGAAGCTAGGTTTCCCATGTTGGTATGGCCGGGCATAAAAGATCGTTAAGTTAGGTAAAAAATCAAAGGTAAAGAGAGAACAGAACGGAACCGATAGCCCCGAATTATGCCGGAAAAGGCAAGAGAAAGAAAAGTCAGGACTCTCTCCACGTACCTCTTATTTGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTGTGAAATATTAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTGTGAAATATTAGATAAAAGGAAATAGAAAATAGGGTAATTCTCATATTAAATGGGATTACACCCATATTCCTCAAATTAAGATTATTTCTTTGACTTATATGAAACAATCAGTTGTCCCACCTCTCTTTTTTTTCTTTTGTTAATAAAGTAATCCTTACCTCTATCCCTATGAAAATAAATGAAGAATTTTGTGACGATAGAGATTGTTGAAATAGGAGGCGGGATAGGGATGGGGATGACTTCACTGTCCCCACCCTATCCTGTGGGCATGGTCAAAACAACCTTAAACACTGGATCAGAGCTTACTGCCTGATTTCAGCACTTATAGAGATCTATTGAGGCACTATAAGGCTTATCAAACATAACTATGTAAATTGGAGCTTATCAAGCCACTATTATTGGAACATATCTACTTAATACAATGCTAATCGAGAACTCTCAAGTCTCACTGATACTTGTGCTCACTTCTCTTGGAGGAACACTTCTATGGATCAAACAATCCACTCTTTTGAGTTGCTTCTTTCTCGAGATTACTTCTACGGGCAAGCAACCAATTCTCTTGAGCTAATTTCTGATCGTTATGGCTTTCTCTTGGTTATGATTGTCCACTCTCAAGACTACTTTTTATTTTTTTCAACTGTTTCTTAACTCAACCACATTGTCCCTCTCATGCTCACTTCTAAGGTAAATCATCCTATTCTCCTGAGCTACTTCCCTCTCTTTATGGTTTTCTCTTAGCTATGAACGTGAAGAGTACCGTCACTTTTTCACTTTTTCTCTTAGCCATGAATGTCAAGAGCACTTCAAGAGAAGACCTCTCTTAACTACAAAAGCTAGTGCATCTACACTGGATAGTTTGTCAAGCATAAGACTTCATCTGCTCTCTTCTACTAGAATAAGAGAGATTGTTTCTTCAAGGGACGGTGTTTCTTATTTTCTGATGATCTATACTCAGACTTGGTCAAACTTGTTGAATCCTACCGAAAAGTCATAGTCATGGTTTACTCCTATGAGTTTCTTTAGAATCATGGCATCTGCAGTGCACTTCATTTTGAATACTCGATAATAATCGAGTTTCTGTCACAATGTTTGTTAGGCATTAGGATATTCTACGACAGTTTTCCCTTGTTGCATGGCTATAGTTATGATCTTGATCTCATAGATTTGAGTTACATCTTGAGCTTTTGAGTAAGTGCGATGAATGAAGGCACATATGGCTTGTGCACTCGAAAAAAAAAAAAAAATGTATCGCTAATGGATGGCTCCATAGAGTCTTAGAGCCATGACATTATCATGGAGTCTTCCTCGTCTATGTAGGAAATTTTTTACTGTCGTTGGTATCAAACCTTTTCCTTTCCTTTAAGGTATGTCTGCACGGTTTAAGGAAGTTTTTTTTCATTGAGTTGGTATGACAGTTAGATGTGTTGTAGGTCACCTGTCCTTTGGACGGTAGGAACCTCCTCTATCGATGATGTGACTTTTGATTCTTTTGACATGATGGTGGAATAAATTGGAAGGTGGGTCTTGGTCATAATAAATGATCGGGGCAGCTATGAAGGCATCACCAGTTAAGGTAGACTTTATGTTTAATTGGCTTGAAGGTGCATTACTCTTCTTTCTTGTTATGGATCAGAGAAGTACATAGGCCTATTTATATAATAAAGAAAAACTAACTCGTCCTCTGGAAAATATGAAGCAGTTCAAAAAAGGAAATGAACAAGGAAAACTAACTAATCCTCTAGGAAATGGAAAACATTACAAAATGGAAATAAAAAATAGACTAATTCCTTCATTAAATGATATTACACCAATAGTCCTCAAATTAATGTTATACCTTCCACCGATATAATTTTCTAAATTAAAAGTGTTGTGCATGATTTCCCGAAGGAAGGTTAAACCTTCCAATTTGGTTTAAGTATCTAGGAGACAGGTAGGTAAGCCTAATTAGTGAATTAGTTCTATGGCAAAGAAAAGGAAAACTGATGCATGTCCAAGCTGGTACGGGCCGGGGCAAGAGAACTTAGGTGAGTTATAGGAATTGAGAGGATAAAAGGATACTTGATTCGATAATAAGAAAGTTGGGGAAAAGAAGACTCTCAAGGAAGAGCTTGAGGTGGACTGGGACCGATGAGAATAGAGTTCTAGATGTGAACTGCTGTTTTCGGCTGAGCAAAATCACTTATCTGAGTCGAGTAGTCTTGTTGTCGTATGAGTCGTATGTCTTACAATAGGCTTGCTTACTGTTGCACCATGGGTGAATACTTGACGCATATCACAAGGTTATGTGTTCTTTACTCTTTTTGAAACCTCCCAGAAAATTGCAGCTGTTACTTCTCTACTAATAACGAAAACTTTTAATTGCTCACTGGTGTAAACATAATTTGATCTAGAAAATCGTGTGCACTATTAATCAAAAAAGTTAACTGAAGTCTTTAGCCTGATGGATGCAGCAAATGGAAATAAGTTCGATTTTCTAATGTCGTTACTCAAATTTTATAATGTCATACTGTTCGAGTAGTACGAGGAAAAATGGTAGTAGATTGAGGCAGATACTTGTGGAAAAATAAAGAAAAAGGCAACCTTTTTGTATTTGTTAGTTATGTAGGTTGTACAACTACAACTATGTCCTTGAGTTGTAAAAATAGTGTTGAAGAAAAAGAAACAGTGATCTGAAACGTGAGGCATATTATGTTTGTTCTTTCTTTTTACTACTATGTCTGTTGCAGCGAGAGGAGCAGGGAAATGAGAAGGATGGCGGTGGGCAGAGAAGAGTTCGTAATAGGGTACGGGGTAAAGGACGTGGTCGATCACAGTACCACCATAATCACAATAACAACCATGGGAACCATGTGGGAACTCCACCTTTGAGTAGTTCTACCACCACCATGGAGCTGGCAGGCACAATGAAGCAGCAGCAGCAGCAGCCTCCGGGACCGAGAATGCCAGACGGGACGAGAGGATTCGCGATGGGGCGGGGGAAGGCAGTGAGTGTGAGTGTGAGTGTGAATATGGTATGA

mRNA sequence

ATGGCTCAACATTCTTCCTCCTCTTCCCTTTCCCCTTCCCAATCCGATCCATCTCTATCTCGCAACTCTTCTCTCAGTCGTCTCAACGCGCAGGCTCCTGAGTTCGTTCCCACTCGCCCATCCTCTCGTTCCGATCTACAACAGCCGCCGCACTCCGCCGCTGGCCCTGCTCCTCCTCCGCCCAAGCAATCGCCTCGGATTCTGATCCCTTCTCCTCCGCCTCCTCCGCCGGCTATGATGCATGTTTATCCTCCCCCTCCCCCGGGATCTCCCTTCCATGTTCCCATTCAGAGCCCTGTCCCTGTCCCCACTCATGTGGTTTCTCTTCAGAATCATCACTATCATCGTCATCATCGTCACCACCATCATTCCCATCATGTTCCTGTGCTTTATCACCCTCATAATCCTCAGTATTATGCCGACAATGGCGGATTTCATGACCCGGACACGGTCGTGCAGCAAGCTCAGAAGCCTCAGGTTGAGACTGATTATGCTGCTCCATCTAGAAGTAAACTCGCTGAGGACGTTTCTTTAAAGCTTTTGAATCAGGTGGAATATTATTTCAGTGATTTAAATTTGACAACAACTGATCATTTGATGAGGTTCATCAATAAAGATCCCGATGGATATGTGCCCATATCGGTTGTTGCATCATTCAAGAAGATTAAGGCTCTCATCAATAGTCACTCTCAGCTAGCCAATATTTTACGGAACTCTTCTAAGCTTATGGTTAGTGAAGATGGAAAGAAAGTCAAACGTAAGCAACCACTTTCTGAGTCAGATATGGAGGAGCTGCAATCTCGCATAGTAATTGCGGAGAACTTACCTGAGGATCATTGCCACCAAAACCTCATGAAGATATTTTCTGCTGTTGGGAGTGTTAAGAATATTCGAACTTGTCAACCTCAAATCTCAGATAGTGGAGCTTCCTCAACAGCTAAATCAGCAAAAGCTGATGGAATGCATTACAGTAGCAAGTTGCATGCATTCGTGGAATATGAATCAGTGGAGCTGGCGGAGAAGGCTGTTGCAGAATTAAATGATGAAGGGAATTGGAGAAATGCACTCAGGCTTCGTTTGATGCTTTCATGCCCGTCAAAATCTGCTCTATCTCGTGGAAAGAAGGGACATAGTGGTGAGATGAACTGCAAAGATGATGAAACCTCTGAACAACCACGTATTGAGAAGCATGTAGACGATCTTTCTGATCAAGTTGACATTCATCTGCATGAACAACGAGAGGAGCAGGGAAATGAGAAGGATGGCGGTGGGCAGAGAAGAGTTCGTAATAGGGTACGGGGTAAAGGACGTGGTCGATCACAGTACCACCATAATCACAATAACAACCATGGGAACCATGTGGGAACTCCACCTTTGAGTAGTTCTACCACCACCATGGAGCTGGCAGGCACAATGAAGCAGCAGCAGCAGCAGCCTCCGGGACCGAGAATGCCAGACGGGACGAGAGGATTCGCGATGGGGCGGGGGAAGGCAGTGAGTGTGAGTGTGAGTGTGAATATGGTATGA

Coding sequence (CDS)

ATGGCTCAACATTCTTCCTCCTCTTCCCTTTCCCCTTCCCAATCCGATCCATCTCTATCTCGCAACTCTTCTCTCAGTCGTCTCAACGCGCAGGCTCCTGAGTTCGTTCCCACTCGCCCATCCTCTCGTTCCGATCTACAACAGCCGCCGCACTCCGCCGCTGGCCCTGCTCCTCCTCCGCCCAAGCAATCGCCTCGGATTCTGATCCCTTCTCCTCCGCCTCCTCCGCCGGCTATGATGCATGTTTATCCTCCCCCTCCCCCGGGATCTCCCTTCCATGTTCCCATTCAGAGCCCTGTCCCTGTCCCCACTCATGTGGTTTCTCTTCAGAATCATCACTATCATCGTCATCATCGTCACCACCATCATTCCCATCATGTTCCTGTGCTTTATCACCCTCATAATCCTCAGTATTATGCCGACAATGGCGGATTTCATGACCCGGACACGGTCGTGCAGCAAGCTCAGAAGCCTCAGGTTGAGACTGATTATGCTGCTCCATCTAGAAGTAAACTCGCTGAGGACGTTTCTTTAAAGCTTTTGAATCAGGTGGAATATTATTTCAGTGATTTAAATTTGACAACAACTGATCATTTGATGAGGTTCATCAATAAAGATCCCGATGGATATGTGCCCATATCGGTTGTTGCATCATTCAAGAAGATTAAGGCTCTCATCAATAGTCACTCTCAGCTAGCCAATATTTTACGGAACTCTTCTAAGCTTATGGTTAGTGAAGATGGAAAGAAAGTCAAACGTAAGCAACCACTTTCTGAGTCAGATATGGAGGAGCTGCAATCTCGCATAGTAATTGCGGAGAACTTACCTGAGGATCATTGCCACCAAAACCTCATGAAGATATTTTCTGCTGTTGGGAGTGTTAAGAATATTCGAACTTGTCAACCTCAAATCTCAGATAGTGGAGCTTCCTCAACAGCTAAATCAGCAAAAGCTGATGGAATGCATTACAGTAGCAAGTTGCATGCATTCGTGGAATATGAATCAGTGGAGCTGGCGGAGAAGGCTGTTGCAGAATTAAATGATGAAGGGAATTGGAGAAATGCACTCAGGCTTCGTTTGATGCTTTCATGCCCGTCAAAATCTGCTCTATCTCGTGGAAAGAAGGGACATAGTGGTGAGATGAACTGCAAAGATGATGAAACCTCTGAACAACCACGTATTGAGAAGCATGTAGACGATCTTTCTGATCAAGTTGACATTCATCTGCATGAACAACGAGAGGAGCAGGGAAATGAGAAGGATGGCGGTGGGCAGAGAAGAGTTCGTAATAGGGTACGGGGTAAAGGACGTGGTCGATCACAGTACCACCATAATCACAATAACAACCATGGGAACCATGTGGGAACTCCACCTTTGAGTAGTTCTACCACCACCATGGAGCTGGCAGGCACAATGAAGCAGCAGCAGCAGCAGCCTCCGGGACCGAGAATGCCAGACGGGACGAGAGGATTCGCGATGGGGCGGGGGAAGGCAGTGAGTGTGAGTGTGAGTGTGAATATGGTATGA

Protein sequence

MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPPPKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRLMLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEKDGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPPGPRMPDGTRGFAMGRGKAVSVSVSVNMV

Homology

[Close]

BLAST of Csor.00g156590 vs. ExPASy Swiss-Prot
Match: O80567 (La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2)

HSP 1 Score: 428.3 bits (1100), Expect = 1.2e-118
Identity = 292/546 (53.48%), Postives = 357/546 (65.38%), Query Frame = 0


Query: 4   HSSSSSLS-PSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPPPK 63
           HS+SS+ S  S SDPSL R+ SLSRLNA APEFVP                 G   PP  
Sbjct: 24  HSTSSTTSASSSSDPSLLRSLSLSRLNAGAPEFVP-----------------GRTTPPLP 83

Query: 64  QSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHH-YHRHHRHH 123
           Q PR++I  PPPPP  M+H+Y   P   PF+ P+  PVP+  H+V +QNHH +HR H+HH
Sbjct: 84  QPPRMII--PPPPPHGMLHMYHHQP---PFNTPVLGPVPIQPHLVPVQNHHPHHRFHQHH 143

Query: 124 HHSHH-----VPVLYHPHNPQYYADNGGFHDPDTVVQQ-------------AQKPQVETD 183
           HH+ H     VPV  H    Q     GG  +PD V ++              Q  +    
Sbjct: 144 HHNRHQNQQYVPVRNHGEY-QQRGGVGGEQEPDLVSKKNDRRDHSKRESKNDQVTETGAS 203

Query: 184 YAAPSRSKLAEDVSLKLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIK 243
            +  S++ L ED   K++NQVEYYFSDLNL TTDHLMRFI KDP+GYVPI VVASFKKIK
Sbjct: 204 VSIDSKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIK 263

Query: 244 ALINSHSQLANILRNSSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQN 303
           A+IN++SQLA +L+NS+KL VSEDGKKV+R  P++ES +EELQSRI++AENLPEDHC+QN
Sbjct: 264 AVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQN 323

Query: 304 LMKIFSAVGSVKNIRTCQPQISDSGASSTAKS-AKADGMHYSSKLHAFVEYESVELAEKA 363
           LMKIFS VGSVKNIRTCQPQ + SGA   A+S AK+DG  +S+K+HAFVEYE VELAE+A
Sbjct: 324 LMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAERA 383

Query: 364 VAELNDEGNWRNALRLRLMLSCPS---KSALSRGKKGHSGEMNCKDDE--TSEQPRIEKH 423
           V EL++ GNWR+ L++RLML   +   K    RG+KGH  ++  ++D+  TSEQ  IEK 
Sbjct: 384 VTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPIEKQ 443

Query: 424 VDDLSDQVDIHLHEQ--REEQGNEKDGGGQRRVRNRVRGKGRGRSQYH--------HNHN 483
            DD S + D H+ EQ   E+QGNEK   GQR+ RNR RGKGRGR Q H        H+HN
Sbjct: 444 SDDCSGEWDTHMQEQPIGEDQGNEK-AAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHN 503

Query: 484 NNH-----GNH-------VGTPPLSSSTTTMELAGTMKQQQQQPPGPRMPDGTRGFAMGR 502
            NH     GNH       VGT P ++    ME  G  K   QQPPGPRMPDGTRGF+MGR
Sbjct: 504 QNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGK---QQPPGPRMPDGTRGFSMGR 542

[Close]

BLAST of Csor.00g156590 vs. ExPASy Swiss-Prot
Match: Q9LHL3 (La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.8e-57
Identity = 156/372 (41.94%), Postives = 220/372 (59.14%), Query Frame = 0


Query: 146 HDPDT---VVQQAQKPQVETDYAAPSRSKLAEDVSLKLLNQVEYYFSDLNLTTTDHLMRF 205
           HDP     +   A +     + ++ S++ L++D+ LK++ QVEY F+D++L   + + + 
Sbjct: 111 HDPAAAFYISNPAVQFPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKH 170

Query: 206 INKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVSEDGKKVKRKQPLSESDM 265
           I+KDP+GYVP+S +AS KKIKAL ++H  ++  LR+SSKL+VSEDGKKVKR    ++ D 
Sbjct: 171 ISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDR 230

Query: 266 EELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTAKSAKADGMH 325
           EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P  S+S         K D + 
Sbjct: 231 EELQGRTVVAENLPDDHSYQNLEKIFGVVGNVKAIRICHPPESNS------SRPKGDFL- 290

Query: 326 YSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRLMLSCPSKSALSRGKKGHSGEMN 385
            S+K+HA +EY++  +A+KAV +LNDE NWR  LR+RL+L C  KS L + ++   G + 
Sbjct: 291 MSNKIHALIEYDNTVIADKAVEKLNDERNWRKGLRVRLLLRCSPKSVL-KNRRNFDGIL- 350

Query: 386 CKDDETSEQPRIEKHVDDLSDQVDIHLHE-QREEQGNEKDGGGQRRVRNRVRGKGRGRSQ 445
             DDE    P  E       D   +HL E Q +  G++ + GG   +  + RGKGRGRS 
Sbjct: 351 -IDDEL---PSYESG----EDSPRLHLTESQLDNDGDDNNVGG---LWGKGRGKGRGRSP 410

Query: 446 YHH-------NHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPPGPRMPDGTRGFAMG 505
             +       +     G  +G P L S  ++     T         GPRMPDGTRGF MG
Sbjct: 411 RSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPKTAT--------KGPRMPDGTRGFTMG 453

Query: 506 RGKAVSVSVSVN 507
           RGK  S+S+S N
Sbjct: 471 RGKP-SISLSPN 453

[Close]

BLAST of Csor.00g156590 vs. ExPASy Swiss-Prot
Match: Q94A38 (La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.5e-44
Identity = 125/328 (38.11%), Postives = 185/328 (56.40%), Query Frame = 0


Query: 174 EDVSLKLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLA 233
           ++++ K++ QVEYYFSD NL T   L+  + ++  G+VPIS +A+F K+K L   H+ + 
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 234 NILRNSSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGS 293
           + L+ SS L+VS D KKVKR  PL E  + + +   V+ ENLPEDH ++N+ +IF   GS
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPE--IRDPKIFTVLVENLPEDHSNENIREIFGKAGS 220

Query: 294 VKNIRTCQPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWR 353
           +K++  C P    +    + K  K +     ++LHAFVEYE+VE AEKA A LN+E +WR
Sbjct: 221 IKSVSICDP----NAVEESEKGGKKENF-IRTRLHAFVEYETVEAAEKAAATLNNEQDWR 280

Query: 354 NALRLRLMLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQR 413
           N LR++L+     K A  R  +    +         +Q   EK+      Q +  LH   
Sbjct: 281 NGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQ-NHRLH--H 340

Query: 414 EEQGNEKDGGGQRRVRNRVRGK--GRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGT 473
            +   + DGG  ++ +N  +G+  G+GR Q   NH   +G   GT   SS      +   
Sbjct: 341 SDNPADDDGGNHQKDKNGNKGRVVGQGRRQ---NHQGGNGIGHGTASSSSHPNYHPV--- 400

Query: 474 MKQQQQQPPGPRMPDGTRGFAMGRGKAV 500
             +  ++PPGPRMPDGTRGF MGRGKA+
Sbjct: 401 --EVSKRPPGPRMPDGTRGFTMGRGKAI 410

[Close]

BLAST of Csor.00g156590 vs. ExPASy Swiss-Prot
Match: Q28G87 (La-related protein 7 OS=Xenopus tropicalis OX=8364 GN=larp7 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.7e-14
Identity = 57/201 (28.36%), Postives = 100/201 (49.75%), Query Frame = 0


Query: 148 PDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKLLNQVEYYFSDLNLTTTDHLMRFINKDP 207
           P   V++ +   +  D     RS++ + +   +  QV+++F D+NL     L   I K  
Sbjct: 9   PSNKVKEDESTDLRKDREKKKRSRV-KQLLADIAKQVDFWFGDVNLHKDRFLREQIEKTR 68

Query: 208 DGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVSEDGKKVKRKQPLSESDMEELQS 267
           DGY+ IS++ASF K+K +      +A  ++NSS + ++  G K++R+ PL E   +++ S
Sbjct: 69  DGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVEINLSGTKIRRRFPLGEKP-QDVDS 128

Query: 268 RIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTAKSAKADGMHYSSKL 327
           R V  E LP++  H  + ++F   G V  +    P+   +G                 K 
Sbjct: 129 RTVYVELLPKNVTHSWIERVFGKYGMV--VYVSIPRYKSTG---------------DPKG 188

Query: 328 HAFVEYESVELAEKAVAELND 349
            AF+E+E+ E A KA+  LN+
Sbjct: 189 FAFIEFETQEQAAKAIEVLNN 190

[Close]

BLAST of Csor.00g156590 vs. ExPASy Swiss-Prot
Match: Q7ZWE3 (La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-13
Identity = 60/186 (32.26%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 163 DYAAPSRSKLAEDVSLKLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKI 222
           D     RS++ + +S  +  QVE++F D+NL     +   I +  DGY+ I+V+ +F ++
Sbjct: 30  DNEKKKRSRVKQLLS-DVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRM 89

Query: 223 KALINSHSQLANILRNSSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQ 282
           K L      +A  L+NS+ + V+++G +++RK+PL E+  +++ SR V  E LP+   H 
Sbjct: 90  KNLTADVKLIARALKNSTIVEVNDEGTRIRRKEPLGETP-KDVDSRTVYVELLPKTVTHI 149

Query: 283 NLMKIFSAVGSVKNIRTCQPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKA 342
            L ++FS  G V  I           +    KS +       SK  AFVE+E+ E A+KA
Sbjct: 150 WLERVFSKCGHVVYI-----------SIPRYKSTR------HSKGFAFVEFETQEQAQKA 196

Query: 343 VAELND 349
           V  LN+
Sbjct: 210 VEMLNN 196

[Close]

BLAST of Csor.00g156590 vs. NCBI nr
Match: KAG6571819.1 (La-related protein 6B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 968 bits (2502), Expect = 0.0
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0


Query: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60
           MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP
Sbjct: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60

Query: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120
           PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH
Sbjct: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120

Query: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL 180
           HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL
Sbjct: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL 180

Query: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240
           LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS
Sbjct: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240

Query: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300
           KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC
Sbjct: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300

Query: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360
           QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL
Sbjct: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360

Query: 361 MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK 420
           MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK
Sbjct: 361 MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK 420

Query: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPP 480
           DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPP
Sbjct: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPP 480

Query: 481 GPRMPDGTRGFAMGRGKAVSVSVSVNMV 508
           GPRMPDGTRGFAMGRGKAVSVSVSVNMV
Sbjct: 481 GPRMPDGTRGFAMGRGKAVSVSVSVNMV 508

[Close]

BLAST of Csor.00g156590 vs. NCBI nr
Match: XP_022952369.1 (la-related protein 6B-like [Cucurbita moschata])

HSP 1 Score: 955 bits (2469), Expect = 0.0
Identity = 503/506 (99.41%), Postives = 505/506 (99.80%), Query Frame = 0


Query: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60
           MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP
Sbjct: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60

Query: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120
           PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH
Sbjct: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120

Query: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL 180
           HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL
Sbjct: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL 180

Query: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240
           LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS
Sbjct: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240

Query: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300
           KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC
Sbjct: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300

Query: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360
           QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL
Sbjct: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360

Query: 361 MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK 420
           MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK
Sbjct: 361 MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK 420

Query: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQ-P 480
           DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQ P
Sbjct: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQQP 480

Query: 481 PGPRMPDGTRGFAMGRGKAVSVSVSV 505
           PGPRMPDGTRGFAMGRGKAVSVSV++
Sbjct: 481 PGPRMPDGTRGFAMGRGKAVSVSVNM 506

[Close]

BLAST of Csor.00g156590 vs. NCBI nr
Match: XP_023553969.1 (la-related protein 6B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 950 bits (2456), Expect = 0.0
Identity = 502/509 (98.62%), Postives = 504/509 (99.02%), Query Frame = 0


Query: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60
           MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQ PPHSAAGPAPPP
Sbjct: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQPPPHSAAGPAPPP 60

Query: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120
           PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH
Sbjct: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120

Query: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL 180
           HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKL EDVSLKL
Sbjct: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLTEDVSLKL 180

Query: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240
           LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS
Sbjct: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240

Query: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300
           KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC
Sbjct: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300

Query: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360
           QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL
Sbjct: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360

Query: 361 MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK 420
           MLSCPSKSAL+RGKKGHSGEMN KDDETSEQPRIEKHVDDLSDQVDIH HEQREEQGNEK
Sbjct: 361 MLSCPSKSALARGKKGHSGEMNFKDDETSEQPRIEKHVDDLSDQVDIHPHEQREEQGNEK 420

Query: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPP 480
           DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPP
Sbjct: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPP 480

Query: 481 GPRMPDGTRGFAMGRGKAV-SVSVSVNMV 508
           GPRMPDGTRGFAMGRGKAV SVSV+VNMV
Sbjct: 481 GPRMPDGTRGFAMGRGKAVVSVSVNVNMV 509

[Close]

BLAST of Csor.00g156590 vs. NCBI nr
Match: XP_022971972.1 (la-related protein 6B-like [Cucurbita maxima])

HSP 1 Score: 944 bits (2439), Expect = 0.0
Identity = 497/509 (97.64%), Postives = 502/509 (98.62%), Query Frame = 0


Query: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60
           MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQ PPHSAAGPAPPP
Sbjct: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQPPPHSAAGPAPPP 60

Query: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120
           PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH
Sbjct: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120

Query: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL 180
           HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKL EDVSLKL
Sbjct: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLTEDVSLKL 180

Query: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240
           LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS
Sbjct: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240

Query: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300
           KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC
Sbjct: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300

Query: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360
           QPQISDSGASST+KSAKADGMHYSSKLHAFVEYESVELAEKAVAE+NDEGNWRNALRLRL
Sbjct: 301 QPQISDSGASSTSKSAKADGMHYSSKLHAFVEYESVELAEKAVAEINDEGNWRNALRLRL 360

Query: 361 MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK 420
           MLSCPSKSAL+RGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVD+H HEQREEQGNEK
Sbjct: 361 MLSCPSKSALARGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDVHPHEQREEQGNEK 420

Query: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPP 480
           DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTP LSSSTTTMELAGTMKQQQQQPP
Sbjct: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPHLSSSTTTMELAGTMKQQQQQPP 480

Query: 481 GPRMPDGTRGFAMGRGKAV-SVSVSVNMV 508
            PRMPDGTRGFAMGRGK V SVSV+VNMV
Sbjct: 481 VPRMPDGTRGFAMGRGKVVVSVSVNVNMV 509

[Close]

BLAST of Csor.00g156590 vs. NCBI nr
Match: XP_038888029.1 (la-related protein 6B [Benincasa hispida])

HSP 1 Score: 833 bits (2153), Expect = 6.32e-302
Identity = 456/508 (89.76%), Postives = 473/508 (93.11%), Query Frame = 0


Query: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60
           MAQHSSS     SQSDPSLSRNSSLSRLNAQAPEFVPTRPS+RSDLQ PP SA GP PPP
Sbjct: 1   MAQHSSS-----SQSDPSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQ-PPQSAPGPPPPP 60

Query: 61  P-KQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHR 120
           P KQSPRILIPSPPPP PAMMHVYPPPP GSPFHVPIQ+PVPVPTHVVS+QNHHYH HHR
Sbjct: 61  PPKQSPRILIPSPPPP-PAMMHVYPPPP-GSPFHVPIQTPVPVPTHVVSIQNHHYHPHHR 120

Query: 121 HHHHSHHVPVLYHPHNPQYYADNGGFHDPDT-VVQQAQKPQVETDYAAPSRSKLAEDVSL 180
           HHHHSHHVPVLYHPHNPQYYADNGGFHDPDT VVQQ QKP VE+DYAAPSRSKL E+VS 
Sbjct: 121 HHHHSHHVPVLYHPHNPQYYADNGGFHDPDTAVVQQPQKPLVESDYAAPSRSKLTEEVSQ 180

Query: 181 KLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRN 240
           KLLNQVEYYFSDLNL TTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRN
Sbjct: 181 KLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRN 240

Query: 241 SSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR 300
           SSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSA GSVKNIR
Sbjct: 241 SSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAAGSVKNIR 300

Query: 301 TCQPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRL 360
           TCQPQISDSGASST+KSAKADGMHYS+KLHAFVEYESVELAEKAV ELNDEGNWRNALRL
Sbjct: 301 TCQPQISDSGASSTSKSAKADGMHYSNKLHAFVEYESVELAEKAVVELNDEGNWRNALRL 360

Query: 361 RLMLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGN 420
           RLMLS  SKSA +RGKKGH+GEMNCKDD+ SEQP IEKHVDDLSDQVD+H HEQREEQGN
Sbjct: 361 RLMLSSTSKSAPARGKKGHNGEMNCKDDDISEQPHIEKHVDDLSDQVDVHPHEQREEQGN 420

Query: 421 EKDGGGQRRVRNRVRGKGRGRSQYHHNHNNNH--GNHVGTPPLSSSTTTMELAGTMKQQQ 480
           EKDGGGQRRVRNRVRGKGRGRSQYHHNHNNNH  GNHVGTPP SSS+TT+E AGTMKQQ 
Sbjct: 421 EKDGGGQRRVRNRVRGKGRGRSQYHHNHNNNHNHGNHVGTPP-SSSSTTIEQAGTMKQQ- 480

Query: 481 QQPPGPRMPDGTRGFAMGRGKAVSVSVS 504
             PPGPRMPDGTRGFAMGRGK V+V+++
Sbjct: 481 --PPGPRMPDGTRGFAMGRGKPVTVNMA 496

[Close]

BLAST of Csor.00g156590 vs. ExPASy TrEMBL
Match: A0A6J1GLH8 (la-related protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111455073 PE=4 SV=1)

HSP 1 Score: 955 bits (2469), Expect = 0.0
Identity = 503/506 (99.41%), Postives = 505/506 (99.80%), Query Frame = 0


Query: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60
           MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP
Sbjct: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60

Query: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120
           PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH
Sbjct: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120

Query: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL 180
           HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL
Sbjct: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL 180

Query: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240
           LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS
Sbjct: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240

Query: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300
           KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC
Sbjct: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300

Query: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360
           QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL
Sbjct: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360

Query: 361 MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK 420
           MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK
Sbjct: 361 MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK 420

Query: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQ-P 480
           DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQ P
Sbjct: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQQP 480

Query: 481 PGPRMPDGTRGFAMGRGKAVSVSVSV 505
           PGPRMPDGTRGFAMGRGKAVSVSV++
Sbjct: 481 PGPRMPDGTRGFAMGRGKAVSVSVNM 506

[Close]

BLAST of Csor.00g156590 vs. ExPASy TrEMBL
Match: A0A6J1I3E0 (la-related protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111470630 PE=4 SV=1)

HSP 1 Score: 944 bits (2439), Expect = 0.0
Identity = 497/509 (97.64%), Postives = 502/509 (98.62%), Query Frame = 0


Query: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60
           MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQ PPHSAAGPAPPP
Sbjct: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQPPPHSAAGPAPPP 60

Query: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120
           PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH
Sbjct: 61  PKQSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHHYHRHHRH 120

Query: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKL 180
           HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKL EDVSLKL
Sbjct: 121 HHHSHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLTEDVSLKL 180

Query: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240
           LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS
Sbjct: 181 LNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSS 240

Query: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300
           KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC
Sbjct: 241 KLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTC 300

Query: 301 QPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRL 360
           QPQISDSGASST+KSAKADGMHYSSKLHAFVEYESVELAEKAVAE+NDEGNWRNALRLRL
Sbjct: 301 QPQISDSGASSTSKSAKADGMHYSSKLHAFVEYESVELAEKAVAEINDEGNWRNALRLRL 360

Query: 361 MLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEK 420
           MLSCPSKSAL+RGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVD+H HEQREEQGNEK
Sbjct: 361 MLSCPSKSALARGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDVHPHEQREEQGNEK 420

Query: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPP 480
           DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTP LSSSTTTMELAGTMKQQQQQPP
Sbjct: 421 DGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPHLSSSTTTMELAGTMKQQQQQPP 480

Query: 481 GPRMPDGTRGFAMGRGKAV-SVSVSVNMV 508
            PRMPDGTRGFAMGRGK V SVSV+VNMV
Sbjct: 481 VPRMPDGTRGFAMGRGKVVVSVSVNVNMV 509

[Close]

BLAST of Csor.00g156590 vs. ExPASy TrEMBL
Match: A0A6J1EJ80 (la-related protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111434957 PE=4 SV=1)

HSP 1 Score: 815 bits (2106), Expect = 8.28e-295
Identity = 437/502 (87.05%), Postives = 463/502 (92.23%), Query Frame = 0


Query: 12  PSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPPP----KQSPRI 71
           PSQSDPSLSRNSSLSRLNAQAPEFVPTR S R DLQ PPHS++G  PPPP    KQSPRI
Sbjct: 18  PSQSDPSLSRNSSLSRLNAQAPEFVPTRSSPRPDLQ-PPHSSSGSQPPPPPPSSKQSPRI 77

Query: 72  LIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVP----THVVSLQNHHYHRHHRHHHH 131
           LIPSPPPP PA+MHVYPPPPPGSPFHVPIQSPVPVP    THVVS+ NHHYH HHRHHHH
Sbjct: 78  LIPSPPPP-PAVMHVYPPPPPGSPFHVPIQSPVPVPVPVPTHVVSIPNHHYHPHHRHHHH 137

Query: 132 -SHHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKLLN 191
            SHHVPVLYHPHNPQYYADNGGFHDPD VVQQ QKP VE+DY APSR+KL E+VS KLLN
Sbjct: 138 HSHHVPVLYHPHNPQYYADNGGFHDPDNVVQQPQKPPVESDYGAPSRTKLTEEVSQKLLN 197

Query: 192 QVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKL 251
           QVEYYFSDLNL TTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKL
Sbjct: 198 QVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKL 257

Query: 252 MVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQP 311
           MV+EDGKKV+RKQPLSESDMEELQSRIVIAENLP+DHCHQNLMKIFSAVGSVKNIRTCQP
Sbjct: 258 MVNEDGKKVRRKQPLSESDMEELQSRIVIAENLPDDHCHQNLMKIFSAVGSVKNIRTCQP 317

Query: 312 QISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRLML 371
           QISD+G SST+KSAKADGMHYS+KLHAFVEYESV LAEKAVAELNDEGNWRNALRLRLML
Sbjct: 318 QISDTGTSSTSKSAKADGMHYSNKLHAFVEYESVVLAEKAVAELNDEGNWRNALRLRLML 377

Query: 372 SCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEKDG 431
           +C SKSA  RGKKGH+GEMNCKDD+TSEQP IEKHVDDLSDQ D+H HEQREEQGNEKDG
Sbjct: 378 TCTSKSAPPRGKKGHNGEMNCKDDDTSEQPHIEKHVDDLSDQADVHPHEQREEQGNEKDG 437

Query: 432 GGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPPGP 491
           GGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPP SSS++++E AGT+KQQ   PPGP
Sbjct: 438 GGQRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPP-SSSSSSIEQAGTVKQQ---PPGP 497

Query: 492 RMPDGTRGFAMGRGKAVSVSVS 504
           RMPDGTRGF+MGRGK VSV+++
Sbjct: 498 RMPDGTRGFSMGRGKPVSVNMA 513

[Close]

BLAST of Csor.00g156590 vs. ExPASy TrEMBL
Match: A0A6J1I059 (la-related protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111468508 PE=4 SV=1)

HSP 1 Score: 810 bits (2091), Expect = 1.59e-292
Identity = 435/500 (87.00%), Postives = 459/500 (91.80%), Query Frame = 0


Query: 12  PSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPPP--KQSPRILI 71
           PSQSDPSLSRNSSLSRLNAQAPEFVPTR S R DLQ PP S++G  PPPP  KQSPRILI
Sbjct: 20  PSQSDPSLSRNSSLSRLNAQAPEFVPTRSSPRPDLQ-PPQSSSGSQPPPPPSKQSPRILI 79

Query: 72  PSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVP----THVVSLQNHHYHRHHRHHHH-S 131
           PSPPPP PA+MHVYPPPPPGSPFHVPIQSPVPVP    THVVS+ NHHYH HHRHHHH S
Sbjct: 80  PSPPPP-PAVMHVYPPPPPGSPFHVPIQSPVPVPVPVPTHVVSIPNHHYHPHHRHHHHHS 139

Query: 132 HHVPVLYHPHNPQYYADNGGFHDPDTVVQQAQKPQVETDYAAPSRSKLAEDVSLKLLNQV 191
           HHVPVLYHPHNPQYYADNGGFHDPD VVQQ QKP VE+DY APSR+KL  +VS KLLNQV
Sbjct: 140 HHVPVLYHPHNPQYYADNGGFHDPDNVVQQPQKPPVESDYGAPSRTKLTGEVSQKLLNQV 199

Query: 192 EYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV 251
           EYYFSDLNL TTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV
Sbjct: 200 EYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMV 259

Query: 252 SEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQI 311
           SEDGKKV+RKQPLSESDMEELQSRIVIAENLP+DHCHQNLMKIFSAVGSVKNIRTCQPQI
Sbjct: 260 SEDGKKVRRKQPLSESDMEELQSRIVIAENLPDDHCHQNLMKIFSAVGSVKNIRTCQPQI 319

Query: 312 SDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRLMLSC 371
           SDSG SST+KSAK DGMHYS+KLHAFVEYESV LAEKAVAELNDEGNWRNALRLRLML+C
Sbjct: 320 SDSGTSSTSKSAKTDGMHYSNKLHAFVEYESVVLAEKAVAELNDEGNWRNALRLRLMLTC 379

Query: 372 PSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQGNEKDGGG 431
            SKS   RGKKGH+GEMNCKDD+TSEQP IEKHVDDLSDQ D+H HEQREEQGNEKDGGG
Sbjct: 380 TSKSTPPRGKKGHNGEMNCKDDDTSEQPHIEKHVDDLSDQADVHPHEQREEQGNEKDGGG 439

Query: 432 QRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPPGPRM 491
           QRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPP SSS++++E AGT+KQQ   PPGPRM
Sbjct: 440 QRRVRNRVRGKGRGRSQYHHNHNNNHGNHVGTPP-SSSSSSIEQAGTVKQQ---PPGPRM 499

Query: 492 PDGTRGFAMGRGKAVSVSVS 504
           PDGTRGF+MGRGK VSV+++
Sbjct: 500 PDGTRGFSMGRGKPVSVNMA 513

[Close]

BLAST of Csor.00g156590 vs. ExPASy TrEMBL
Match: A0A1S3BGU3 (la-related protein 6B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489697 PE=4 SV=1)

HSP 1 Score: 801 bits (2068), Expect = 2.31e-289
Identity = 443/509 (87.03%), Postives = 461/509 (90.57%), Query Frame = 0


Query: 1   MAQHSSSSSLSPSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPP 60
           MAQHSSS     SQSD SLSRNSSLSRLNAQAPEFVPTRPS+R DLQ        P PPP
Sbjct: 1   MAQHSSS-----SQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRPDLQ--------PLPPP 60

Query: 61  PKQSPRILIPSPPPPPP-AMMHVYPPPPPGSPFHVPIQS-PVPVPTHVVSLQNHHYHRHH 120
           PKQSPRILIPSPPPPPP AMMH YPPPPPGSPFHVPIQ+ PVPVPTHVVSLQNH YH HH
Sbjct: 61  PKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSLQNHPYHPHH 120

Query: 121 RHHHHSHHVPVLYHPHNPQYYADNGGFHDPDT-VVQQAQKPQVETDYAAPSRSKLAEDVS 180
           RHHHHSHHVPVLYHPHNPQYYADNGGFHDPDT VVQ AQKP +E+DYAAPSRSKL ++VS
Sbjct: 121 RHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLLESDYAAPSRSKLTDEVS 180

Query: 181 LKLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLANILR 240
            KLLNQVEYYFSDLNL TTDHLMRF+NKDPDGYVPISVVASFKKIKALINSH QLANILR
Sbjct: 181 QKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILR 240

Query: 241 NSSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNI 300
           NSSKL+VSEDGKKVKRKQP SESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNI
Sbjct: 241 NSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNI 300

Query: 301 RTCQPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWRNALR 360
           RTCQPQISDSGASST+KSAKADGMHYS+KLHAFVEYESVELAEKAVAELNDEGNWRNALR
Sbjct: 301 RTCQPQISDSGASSTSKSAKADGMHYSNKLHAFVEYESVELAEKAVAELNDEGNWRNALR 360

Query: 361 LRLMLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQREEQG 420
           LRLMLSC SKSA  RGKKGH+GEMN KD + SEQP IEKHVDDLSDQVD+H  EQREE G
Sbjct: 361 LRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASEQPAIEKHVDDLSDQVDVHPPEQREEHG 420

Query: 421 NEKDGGGQRRVRNRVRGKGRGRSQYHHNHNN--NHGNHVGTPPLSSSTTTMELAGTMKQQ 480
           NEKDGGGQRRVRNRVRGKGRGRSQYHHNHNN  NHGNHVGTPP SSSTT +E AGTMKQQ
Sbjct: 421 NEKDGGGQRRVRNRVRGKGRGRSQYHHNHNNIHNHGNHVGTPPPSSSTT-IEQAGTMKQQ 480

Query: 481 QQQPPGPRMPDGTRGFAMGRGKAVSVSVS 504
              PPGPRMPDGTRGFAMGRGK V+V+++
Sbjct: 481 ---PPGPRMPDGTRGFAMGRGKPVTVNMT 492

[Close]

BLAST of Csor.00g156590 vs. TAIR 10
Match: AT2G43970.1 (RNA-binding protein )

HSP 1 Score: 428.3 bits (1100), Expect = 8.5e-120
Identity = 292/546 (53.48%), Postives = 357/546 (65.38%), Query Frame = 0


Query: 4   HSSSSSLS-PSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPPPK 63
           HS+SS+ S  S SDPSL R+ SLSRLNA APEFVP                 G   PP  
Sbjct: 24  HSTSSTTSASSSSDPSLLRSLSLSRLNAGAPEFVP-----------------GRTTPPLP 83

Query: 64  QSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHH-YHRHHRHH 123
           Q PR++I  PPPPP  M+H+Y   P   PF+ P+  PVP+  H+V +QNHH +HR H+HH
Sbjct: 84  QPPRMII--PPPPPHGMLHMYHHQP---PFNTPVLGPVPIQPHLVPVQNHHPHHRFHQHH 143

Query: 124 HHSHH-----VPVLYHPHNPQYYADNGGFHDPDTVVQQ-------------AQKPQVETD 183
           HH+ H     VPV  H    Q     GG  +PD V ++              Q  +    
Sbjct: 144 HHNRHQNQQYVPVRNHGEY-QQRGGVGGEQEPDLVSKKNDRRDHSKRESKNDQVTETGAS 203

Query: 184 YAAPSRSKLAEDVSLKLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIK 243
            +  S++ L ED   K++NQVEYYFSDLNL TTDHLMRFI KDP+GYVPI VVASFKKIK
Sbjct: 204 VSIDSKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIK 263

Query: 244 ALINSHSQLANILRNSSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQN 303
           A+IN++SQLA +L+NS+KL VSEDGKKV+R  P++ES +EELQSRI++AENLPEDHC+QN
Sbjct: 264 AVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQN 323

Query: 304 LMKIFSAVGSVKNIRTCQPQISDSGASSTAKS-AKADGMHYSSKLHAFVEYESVELAEKA 363
           LMKIFS VGSVKNIRTCQPQ + SGA   A+S AK+DG  +S+K+HAFVEYE VELAE+A
Sbjct: 324 LMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAERA 383

Query: 364 VAELNDEGNWRNALRLRLMLSCPS---KSALSRGKKGHSGEMNCKDDE--TSEQPRIEKH 423
           V EL++ GNWR+ L++RLML   +   K    RG+KGH  ++  ++D+  TSEQ  IEK 
Sbjct: 384 VTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPIEKQ 443

Query: 424 VDDLSDQVDIHLHEQ--REEQGNEKDGGGQRRVRNRVRGKGRGRSQYH--------HNHN 483
            DD S + D H+ EQ   E+QGNEK   GQR+ RNR RGKGRGR Q H        H+HN
Sbjct: 444 SDDCSGEWDTHMQEQPIGEDQGNEK-AAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHN 503

Query: 484 NNH-----GNH-------VGTPPLSSSTTTMELAGTMKQQQQQPPGPRMPDGTRGFAMGR 502
            NH     GNH       VGT P ++    ME  G  K   QQPPGPRMPDGTRGF+MGR
Sbjct: 504 QNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGK---QQPPGPRMPDGTRGFSMGR 542

[Close]

BLAST of Csor.00g156590 vs. TAIR 10
Match: AT2G43970.2 (RNA-binding protein )

HSP 1 Score: 393.3 bits (1009), Expect = 3.0e-109
Identity = 279/546 (51.10%), Postives = 342/546 (62.64%), Query Frame = 0


Query: 4   HSSSSSLS-PSQSDPSLSRNSSLSRLNAQAPEFVPTRPSSRSDLQQPPHSAAGPAPPPPK 63
           HS+SS+ S  S SDPSL R+ SLSRLNA APEFVP                 G   PP  
Sbjct: 24  HSTSSTTSASSSSDPSLLRSLSLSRLNAGAPEFVP-----------------GRTTPPLP 83

Query: 64  QSPRILIPSPPPPPPAMMHVYPPPPPGSPFHVPIQSPVPVPTHVVSLQNHH-YHRHHRHH 123
           Q PR++I  PPPPP  M+H+Y   P   PF+ P+  PVP+  H+V +QNHH +HR H+HH
Sbjct: 84  QPPRMII--PPPPPHGMLHMYHHQP---PFNTPVLGPVPIQPHLVPVQNHHPHHRFHQHH 143

Query: 124 HHSHH-----VPVLYHPHNPQYYADNGGFHDPDTVVQQ-------------AQKPQVETD 183
           HH+ H     VPV  H    Q     GG  +PD V ++              Q  +    
Sbjct: 144 HHNRHQNQQYVPVRNHGEY-QQRGGVGGEQEPDLVSKKNDRRDHSKRESKNDQVTETGAS 203

Query: 184 YAAPSRSKLAEDVSLKLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIK 243
            +  S++ L ED   K++NQVEYYFSDLNL TTDHLMRFI KDP+GYVPI VVASFKKIK
Sbjct: 204 VSIDSKTGLPEDSIQKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIK 263

Query: 244 ALINSHSQLANILRNSSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQN 303
           A+IN++SQLA +L+NS+KL VSEDGKKV+R  P++ES +EELQSRI++AENLPEDHC+QN
Sbjct: 264 AVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQN 323

Query: 304 LMKIFSAVGSVKNIRTCQPQISDSGASSTAKS-AKADGMHYSSKLHAFVEYESVELAEKA 363
           LMKIFS VGSVKNIRTCQPQ + SGA   A+S AK+DG  +S+K                
Sbjct: 324 LMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNK---------------- 383

Query: 364 VAELNDEGNWRNALRLRLMLSCPS---KSALSRGKKGHSGEMNCKDDE--TSEQPRIEKH 423
           V EL++ GNWR+ L++RLML   +   K    RG+KGH  ++  ++D+  TSEQ  IEK 
Sbjct: 384 VTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPIEKQ 443

Query: 424 VDDLSDQVDIHLHEQ--REEQGNEKDGGGQRRVRNRVRGKGRGRSQYH--------HNHN 483
            DD S + D H+ EQ   E+QGNEK   GQR+ RNR RGKGRGR Q H        H+HN
Sbjct: 444 SDDCSGEWDTHMQEQPIGEDQGNEK-AAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHN 503

Query: 484 NNH-----GNH-------VGTPPLSSSTTTMELAGTMKQQQQQPPGPRMPDGTRGFAMGR 502
            NH     GNH       VGT P ++    ME  G  K   QQPPGPRMPDGTRGF+MGR
Sbjct: 504 QNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGK---QQPPGPRMPDGTRGFSMGR 526

[Close]

BLAST of Csor.00g156590 vs. TAIR 10
Match: AT3G19090.1 (RNA-binding protein )

HSP 1 Score: 223.4 bits (568), Expect = 4.1e-58
Identity = 156/372 (41.94%), Postives = 220/372 (59.14%), Query Frame = 0


Query: 146 HDPDT---VVQQAQKPQVETDYAAPSRSKLAEDVSLKLLNQVEYYFSDLNLTTTDHLMRF 205
           HDP     +   A +     + ++ S++ L++D+ LK++ QVEY F+D++L   + + + 
Sbjct: 111 HDPAAAFYISNPAVQFPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKH 170

Query: 206 INKDPDGYVPISVVASFKKIKALINSHSQLANILRNSSKLMVSEDGKKVKRKQPLSESDM 265
           I+KDP+GYVP+S +AS KKIKAL ++H  ++  LR+SSKL+VSEDGKKVKR    ++ D 
Sbjct: 171 ISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDR 230

Query: 266 EELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTAKSAKADGMH 325
           EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P  S+S         K D + 
Sbjct: 231 EELQGRTVVAENLPDDHSYQNLEKIFGVVGNVKAIRICHPPESNS------SRPKGDFL- 290

Query: 326 YSSKLHAFVEYESVELAEKAVAELNDEGNWRNALRLRLMLSCPSKSALSRGKKGHSGEMN 385
            S+K+HA +EY++  +A+KAV +LNDE NWR  LR+RL+L C  KS L + ++   G + 
Sbjct: 291 MSNKIHALIEYDNTVIADKAVEKLNDERNWRKGLRVRLLLRCSPKSVL-KNRRNFDGIL- 350

Query: 386 CKDDETSEQPRIEKHVDDLSDQVDIHLHE-QREEQGNEKDGGGQRRVRNRVRGKGRGRSQ 445
             DDE    P  E       D   +HL E Q +  G++ + GG   +  + RGKGRGRS 
Sbjct: 351 -IDDEL---PSYESG----EDSPRLHLTESQLDNDGDDNNVGG---LWGKGRGKGRGRSP 410

Query: 446 YHH-------NHNNNHGNHVGTPPLSSSTTTMELAGTMKQQQQQPPGPRMPDGTRGFAMG 505
             +       +     G  +G P L S  ++     T         GPRMPDGTRGF MG
Sbjct: 411 RSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPKTAT--------KGPRMPDGTRGFTMG 453

Query: 506 RGKAVSVSVSVN 507
           RGK  S+S+S N
Sbjct: 471 RGKP-SISLSPN 453

[Close]

BLAST of Csor.00g156590 vs. TAIR 10
Match: AT5G46250.1 (RNA-binding protein )

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-45
Identity = 125/328 (38.11%), Postives = 185/328 (56.40%), Query Frame = 0


Query: 174 EDVSLKLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLA 233
           ++++ K++ QVEYYFSD NL T   L+  + ++  G+VPIS +A+F K+K L   H+ + 
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 234 NILRNSSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGS 293
           + L+ SS L+VS D KKVKR  PL E  + + +   V+ ENLPEDH ++N+ +IF   GS
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPE--IRDPKIFTVLVENLPEDHSNENIREIFGKAGS 220

Query: 294 VKNIRTCQPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWR 353
           +K++  C P    +    + K  K +     ++LHAFVEYE+VE AEKA A LN+E +WR
Sbjct: 221 IKSVSICDP----NAVEESEKGGKKENF-IRTRLHAFVEYETVEAAEKAAATLNNEQDWR 280

Query: 354 NALRLRLMLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQR 413
           N LR++L+     K A  R  +    +         +Q   EK+      Q +  LH   
Sbjct: 281 NGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQ-NHRLH--H 340

Query: 414 EEQGNEKDGGGQRRVRNRVRGK--GRGRSQYHHNHNNNHGNHVGTPPLSSSTTTMELAGT 473
            +   + DGG  ++ +N  +G+  G+GR Q   NH   +G   GT   SS      +   
Sbjct: 341 SDNPADDDGGNHQKDKNGNKGRVVGQGRRQ---NHQGGNGIGHGTASSSSHPNYHPV--- 400

Query: 474 MKQQQQQPPGPRMPDGTRGFAMGRGKAV 500
             +  ++PPGPRMPDGTRGF MGRGKA+
Sbjct: 401 --EVSKRPPGPRMPDGTRGFTMGRGKAI 410

[Close]

BLAST of Csor.00g156590 vs. TAIR 10
Match: AT5G46250.2 (RNA-binding protein )

HSP 1 Score: 141.4 bits (355), Expect = 2.1e-33
Identity = 97/280 (34.64%), Postives = 147/280 (52.50%), Query Frame = 0


Query: 174 EDVSLKLLNQVEYYFSDLNLTTTDHLMRFINKDPDGYVPISVVASFKKIKALINSHSQLA 233
           ++++ K++ QVEYYFSD NL T   L+  + ++  G+VPIS +A+F K+K L   H+ + 
Sbjct: 101 DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIV 160

Query: 234 NILRNSSKLMVSEDGKKVKRKQPLSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGS 293
           + L+ SS L+VS D KKVKR  PL E  + + +   V+ ENLPEDH ++N+ +IF   GS
Sbjct: 161 SALKESSFLVVSADEKKVKRLSPLPE--IRDPKIFTVLVENLPEDHSNENIREIFGKAGS 220

Query: 294 VKNIRTCQPQISDSGASSTAKSAKADGMHYSSKLHAFVEYESVELAEKAVAELNDEGNWR 353
           +K++  C P    +    + K  K +     ++LHAFVEYE+VE AEKA A LN+E +WR
Sbjct: 221 IKSVSICDP----NAVEESEKGGKKENF-IRTRLHAFVEYETVEAAEKAAATLNNEQDWR 280

Query: 354 NALRLRLMLSCPSKSALSRGKKGHSGEMNCKDDETSEQPRIEKHVDDLSDQVDIHLHEQR 413
           N LR++L+     K A  R                                        R
Sbjct: 281 NGLRVKLLEQAAGKFAQRR--------------------------------------PAR 333

Query: 414 EEQGNEKDGGGQRRVRNRVRGKGRGRSQYHHNHNNNHGNH 454
            E   EKD  G  RV ++  G+   +++ H NH  +H ++
Sbjct: 341 REVDKEKDTTG--RVHDQTGGEKNKKTREHQNHRLHHSDN 333

The following BLAST results are available for this feature:

BLAST of Csor.00g156590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80567	1.2e-118	53.48	La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2	[more]
Q9LHL3	5.8e-57	41.94	La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1	[more]
Q94A38	2.5e-44	38.11	La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1	[more]
Q28G87	4.7e-14	28.36	La-related protein 7 OS=Xenopus tropicalis OX=8364 GN=larp7 PE=2 SV=1	[more]
Q7ZWE3	2.3e-13	32.26	La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1	[more]

BLAST of Csor.00g156590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571819.1	0.0	100.00	La-related protein 6B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022952369.1	0.0	99.41	la-related protein 6B-like [Cucurbita moschata]	[more]
XP_023553969.1	0.0	98.62	la-related protein 6B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971972.1	0.0	97.64	la-related protein 6B-like [Cucurbita maxima]	[more]
XP_038888029.1	6.32e-302	89.76	la-related protein 6B [Benincasa hispida]	[more]

BLAST of Csor.00g156590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLH8	0.0	99.41	la-related protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111455073 PE=4 SV...	[more]
A0A6J1I3E0	0.0	97.64	la-related protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111470630 PE=4 SV=1	[more]
A0A6J1EJ80	8.28e-295	87.05	la-related protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111434957 PE=4 SV...	[more]
A0A6J1I059	1.59e-292	87.00	la-related protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111468508 PE=4 SV=1	[more]
A0A1S3BGU3	2.31e-289	87.03	la-related protein 6B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489697 PE=4 SV...	[more]

BLAST of Csor.00g156590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43970.1	8.5e-120	53.48	RNA-binding protein	[more]
AT2G43970.2	3.0e-109	51.10	RNA-binding protein	[more]
AT3G19090.1	4.1e-58	41.94	RNA-binding protein	[more]
AT5G46250.1	1.8e-45	38.11	RNA-binding protein	[more]
AT5G46250.2	2.1e-33	34.64	RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002344	Lupus La protein	PRINTS	PR00302	LUPUSLA	coord: 209..224 score: 32.95 coord: 183..200 score: 50.0 coord: 325..343 score: 27.75 coord: 240..253 score: 38.31
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 174..254 e-value: 2.8E-35 score: 133.2
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 180..238 e-value: 4.1E-18 score: 65.2
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 170..261 score: 25.135078
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 168..257 e-value: 6.2E-26 score: 92.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 258..369 e-value: 3.8E-10 score: 41.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..487
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..482
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 429..446
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 373..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..393
None	No IPR available	PANTHER	PTHR22792:SF112	LA-RELATED PROTEIN 6B-LIKE	coord: 7..500
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 7..500
None	No IPR available	CDD	cd08033	LARP_6	coord: 179..253 e-value: 1.69384E-35 score: 125.088
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 268..365 score: 9.473308
IPR034878	Plant La-related protein, RNA recognition motif	CDD	cd12288	RRM_La_like_plant	coord: 268..362 e-value: 3.04674E-44 score: 149.205
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 232..358
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 174..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g156590.m01	Csor.00g156590.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005844	polysome
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding