Csor.00g156290 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g156290
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 8873810 .. 8873993 (+)
RNA-Seq ExpressionCsor.00g156290
SyntenyCsor.00g156290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAAAAGGGTGGTCGTTGGCGAACTTCTTGATCTTGTAAGTGATTTTTGTTCTGATGTCAGGCAGATCCATAGCTGCCTCCGGAAACGTCATGAAAAAGGATTGCACCGATCTCATTCGTTGGATTGCGCTTCTGATTCATCTGATTTTGAAAGAGCATTCCAGAAGACCAGACTTTTCC

mRNA sequence

ATGAGCAAAAGGGTGGTCGTTGGCGAACTTCTTGATCTTGTAAGTGATTTTTGTTCTGATGTCAGGCAGATCCATAGCTGCCTCCGGAAACGTCATGAAAAAGGATTGCACCGATCTCATTCGTTGGATTGCGCTTCTGATTCATCTGATTTTGAAAGAGCATTCCAGAAGACCAGACTTTTCC

Coding sequence (CDS)

ATGAGCAAAAGGGTGGTCGTTGGCGAACTTCTTGATCTTGTAAGTGATTTTTGTTCTGATGTCAGGCAGATCCATAGCTGCCTCCGGAAACGTCATGAAAAAGGATTGCACCGATCTCATTCGTTGGATTGCGCTTCTGATTCATCTGATTTTGAAAGAGCATTCCAGAAGACCAGACTTTTCC

Protein sequence

MSKRVVVGELLDLVSDFCSDVRQIHSCLRKRHEKGLHRSHSLDCASDSSDFERAFQKTRLF
Homology
[Close]
BLAST of Csor.00g156290 vs. NCBI nr
Match: KAG6588577.1 (hypothetical protein SDJN03_17142, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127 bits (318), Expect = 8.87e-37
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MSKRVVVGELLDLVSDFCSDVRQIHSCLRKRHEKGLHRSHSLDCASDSSDFERAFQKTRL 60
          MSKRVVVGELLDLVSDFCSDVRQIHSCLRKRHEKGLHRSHSLDCASDSSDFERAFQKTRL
Sbjct: 1  MSKRVVVGELLDLVSDFCSDVRQIHSCLRKRHEKGLHRSHSLDCASDSSDFERAFQKTRL 60

[Close]
BLAST of Csor.00g156290 vs. NCBI nr
Match: KAG6601839.1 (Heavy metal-associated isoprenylated plant protein 37, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 86.7 bits (213), Expect = 4.04e-18
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 15  SDFCSDVRQIHSCLRKRHEKGLHRSHSLDCASDSSDFERAFQKTRLF 61
           S  CS + QIHSCLRKRHEKGLHRSHSLDCASDSSDFERAFQKTRLF
Sbjct: 335 SSSCS-IMQIHSCLRKRHEKGLHRSHSLDCASDSSDFERAFQKTRLF 380

The following BLAST results are available for this feature:
BLAST of Csor.00g156290 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g156290 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588577.18.87e-37100.00hypothetical protein SDJN03_17142, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6601839.14.04e-1889.36Heavy metal-associated isoprenylated plant protein 37, partial [Cucurbita argyro... [more]
BLAST of Csor.00g156290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g156290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g156290.m01Csor.00g156290.m01mRNA