Csor.00g156000 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g156000
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ubiquitin-conjugating enzyme E2 5-like
Location	Csor_Chr11: 591247 .. 593763 (-)
RNA-Seq Expression	Csor.00g156000
Synteny	Csor.00g156000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTCCAAGCAAAAGGAGAGAAATGGATGTCATGAAATTGTAAGAGGCCTTTGTTATTTATCGTGATTTCGTGTTCTTGTTTGAGTCATTGGTTATTGTGGTTCTTCTACGTCGTCTTTATGGACGCCTGTTTATGAGCCTTCCAACAACCAAGAAGATGCTATTTTGAAAACGAAAATGATCTACTAGTACTGCAATAAGTTAGAGGAAAGTAACCTGTTGATTTTCTTTATAGTAATATTTCTAAGCATGTTTGGTCATTACTTAAGTGTGTTATTTATCATTAAAAGCTAGGTGAGTTCAATGGTGTGTGTTTACTGCTCTTAAATGTAGTGATGAATGTAGTGAGCTGTGGCTGAGATTTGATCAAATAAATATGGTTGCAGCAAAAGTAACCTTATCCTGTCATTATTATGTGCTAGAAAACATGTTAGGCATGCTGGCCTAGAACTGGCCCTGCATTGGGGTGGTCGGGTTTGAGTTTGAATATCGTTCACTGTTAAGCCTACTGAATGGCTAATGCTATGAATTGGGGAGGAGAACGAAACATTCTTTGTGAAGGTGTGGAAACCTCTCCCTAAACTTTGAGGGGAAGCCCAAAGAAGACAATATTTGCTAGCGGTGGGCTTGGGCCGTATAGCTATAGTATAGAAGCCACACTTGTACACATGCTATCTCTTACTCGAAAATGTGGAACTGAGGTTCTAGGTTCCTAATATCGTATGATGGCGGCCTTAAATTTCTGTAGGTTGATCTTGTGGTTTATGTTGTCCAGGATGATGAGTGACTACAACGTGGAGATGATAAACGATGGACTAAACGAATTCAACGTGGAGTTCCACGGTCCCAAAGAAAGTATTGCTCGTCTTTCGCCTCTGTCAAATATGCATTTCGTAGTCGTCGATGGAATAGCAATTATTTGTTTGTGGGTGTGTATGAGCCTTATTGGATTGCAATTGAACAATTTAGCAAACATGCCGGCAGTCTAAAGCCAATTCTTTTATCTTATTTGGAAGTCTACTGAAAATTTATCCTTGAAGTGAGGTGTTTCTACTGCTTTCCTGTGTAATTTATGGACACTTAAAATGCATCTAGTTTAGTTGCATGTTTTCATACTCGATGAACGATTTTTTACCACATTTGGATCTAGAGCGTTTTCTAAAGTTTCGTTGTCCCTGCAGGCTTATATGAAACTGGTGTTTGGAAAATCCGTGTTGAGCTTCCCGACGCGTATCCATATAAGTCTCCTTCAATTGGCTTTGTGAACAAGATATTCCACCCAAATGTTGATGAACTGTAAGTATCTTTTCTCTTTTAAACCATCAAATGAAATCGGTTCGATGCTTCACGAATTCGTAGCAAAGTATTTTACGTACGAGTTTTACCTGCAGATCTGGTTCTGTGTGCTTGGATGTGATTAATCAGTCTTGGAGTCCGATGTTCGGTAATTATCTACCATCCTCACTAAACCTCTATTAACACCTTACTAGACTCGAGTGTTTTCTGTTTATGTGTTCTGTGATAAGATGATATTAAACAATAGTTGTAACTACCCAATCCCAGCGCTAATAGATATTGTCCTCTTTGAGCTTTTCCTTTTAGGCTTCCCTTCAAGGTTTTTATTTGAGCTTTTCCTTTTAGGCTTCCCTTCAAGGTTTTTAAAACGCATCTGCTAGAGAGAGATTTCCACGCCCAATCCACTCCTTCGGGGCACACATTCCCTTCTCCAATCGATGTGAGACCCCTCAATCCACCTTCCTTCGGGACCCAGCGTCCTTGCTGGCACACCGTCTCGTGTCCACCCCCCTTCGGGGCTCAACCTCCTCACTGGCACATTGCCCGATGTCTGACTCTAATACCATTTGTAACAGCCCAAGTCCACTGCTAGCATATATTGTCTTCTTTGGGCTTTCCTTCTCGGGTTTTCCTAAAAGGTTTTTACAACACGTTTGTTGGGGGAAGGTTTCCACACCCTTATAAAGAATGTTTCATTCTCCTTCCCAACCGATGTGATTTTGATGTGTTTGGAAATATAATTTAAAGTTCATGATCCATGGTACCATATGAACTGTATTGTGACTCCCAAAATATAGGACTAAACTTGGCCCTCATTTTACATGTATTTGGGTTTGCATATGTTTGTGTCGATTCTTACCACTTTCTTTTGGCCTCTGCAGATCTTTTAAACGTTTTCGAGGTTTTTCTTCCCCAGCTTCTTCTTTATCCCAATCCTTCAGACCCCCTTAACGGCGATGCAGCATCGCTTATGATGAAGGACCGGAAGCAGTACGATGAAAAAGTTAAAGGTATATATTTGTCGCAGTCGAGTCTATAGTCGACTTTGACACCATTTCTATGATAACTCAATATCTACTTCCATGTGGATACAGAGTACTGCGAAAAGTATGCAAAGGAGAACACAGCAGAAGATGACAGTGAAGAAGAGGATGAAATGAGCGATAACGAAAGCAGTTCGAGTGACGGGGATGTTACTCGACATGCCGATCCATGA

mRNA sequence

ATGTCTTCTCCAAGCAAAAGGAGAGAAATGGATGTCATGAAATTGATGATGAGTGACTACAACGTGGAGATGATAAACGATGGACTAAACGAATTCAACGTGGAGTTCCACGGTCCCAAAGAAAGTATTGCTCGTCTTTCGCCTCTGTCAAATATGCATTTCGTAGTCGTCGATGGAATAGCAATTATTTGTTTGTGGGTGTGCTTATATGAAACTGGTGTTTGGAAAATCCGTGTTGAGCTTCCCGACGCGTATCCATATAAGTCTCCTTCAATTGGCTTTGTGAACAAGATATTCCACCCAAATGTTGATGAACTATCTGGTTCTGTGTGCTTGGATGTGATTAATCAGTCTTGGAGTCCGATGTTCGATCTTTTAAACGTTTTCGAGGTTTTTCTTCCCCAGCTTCTTCTTTATCCCAATCCTTCAGACCCCCTTAACGGCGATGCAGCATCGCTTATGATGAAGGACCGGAAGCAGTACGATGAAAAAGTTAAAGAGTACTGCGAAAAGTATGCAAAGGAGAACACAGCAGAAGATGACAGTGAAGAAGAGGATGAAATGAGCGATAACGAAAGCAGTTCGAGTGACGGGGATGTTACTCGACATGCCGATCCATGA

Coding sequence (CDS)

ATGTCTTCTCCAAGCAAAAGGAGAGAAATGGATGTCATGAAATTGATGATGAGTGACTACAACGTGGAGATGATAAACGATGGACTAAACGAATTCAACGTGGAGTTCCACGGTCCCAAAGAAAGTATTGCTCGTCTTTCGCCTCTGTCAAATATGCATTTCGTAGTCGTCGATGGAATAGCAATTATTTGTTTGTGGGTGTGCTTATATGAAACTGGTGTTTGGAAAATCCGTGTTGAGCTTCCCGACGCGTATCCATATAAGTCTCCTTCAATTGGCTTTGTGAACAAGATATTCCACCCAAATGTTGATGAACTATCTGGTTCTGTGTGCTTGGATGTGATTAATCAGTCTTGGAGTCCGATGTTCGATCTTTTAAACGTTTTCGAGGTTTTTCTTCCCCAGCTTCTTCTTTATCCCAATCCTTCAGACCCCCTTAACGGCGATGCAGCATCGCTTATGATGAAGGACCGGAAGCAGTACGATGAAAAAGTTAAAGAGTACTGCGAAAAGTATGCAAAGGAGAACACAGCAGAAGATGACAGTGAAGAAGAGGATGAAATGAGCGATAACGAAAGCAGTTCGAGTGACGGGGATGTTACTCGACATGCCGATCCATGA

Protein sequence

MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGIAIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAEDDSEEEDEMSDNESSSSDGDVTRHADP

Homology

[Close]

BLAST of Csor.00g156000 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 8.6e-68
Identity = 133/199 (66.83%), Postives = 154/199 (77.39%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMD+MKLMMSDY VEMINDG+ EF VEF GPK+SI                 
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSI----------------- 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                    YE GVWKIRVELPDAYPYKSPS+GF+ KI+HPNVDE+SGSVCLDVINQ+WS
Sbjct: 61  ---------YEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDL+NVFE FLPQLLLYPNPSDPLNG+AA+LMM+DR  Y+++VKEYCEKYAK     +
Sbjct: 121 PMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPRADTE 172

Query: 181 DSEEEDEMSDNESSSSDGD 200
           +   +DEMS++E  +SDGD
Sbjct: 181 EMSSDDEMSEDE-YASDGD 172

[Close]

BLAST of Csor.00g156000 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.3e-67
Identity = 133/210 (63.33%), Postives = 158/210 (75.24%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMD+MKLMMSDY V+MINDG++EF V FHGPK+SI                 
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSI----------------- 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                    Y+ GVWK+RVEL +AYPYKSPSIGF NKI+HPNVDE+SGSVCLDVINQ+WS
Sbjct: 61  ---------YQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKE---NT 180
           PMFDL+N+FEVFLPQLLLYPNPSDPLNG+AASLMM+D+  Y+ KVKEYCE+YAK    + 
Sbjct: 121 PMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYAKPEDISP 180

Query: 181 AEDDSEEEDEMSDNES-SSSDGDVTRHADP 207
            E++ E ++E+SD E   S D  +  HADP
Sbjct: 181 EEEEEESDEELSDAEGYDSGDEAIMGHADP 184

[Close]

BLAST of Csor.00g156000 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2)

HSP 1 Score: 255.0 bits (650), Expect = 7.3e-67
Identity = 129/199 (64.82%), Postives = 151/199 (75.88%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMD+MKLMMSDY VE INDG+ EF VEF+GPK+S                  
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDS------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LY+ GVWKIRVELPDAYPYKSPS+GF+ KI+HPNVDELSGSVCLDVINQ+WS
Sbjct: 61  --------LYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDL+NVFE FLPQLLLYPNPSDPLNG+AA+LMM+DR  Y+++VKEYCEKYAK     +
Sbjct: 121 PMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKPGEGSE 173

Query: 181 DSEEEDEMSDNESSSSDGD 200
           D   ++E+S+ E  S + D
Sbjct: 181 DKSSDEELSEEEYGSDNED 173

[Close]

BLAST of Csor.00g156000 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 3.8e-63
Identity = 127/209 (60.77%), Postives = 150/209 (71.77%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           M+SPSKRREMD+MKLMMSDY V+ +ND L  F V FHGP +S                  
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDS------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LY+ GVWKI+VELP+AYPYKSPS+GFVNKI+HPNVDE SG+VCLDVINQ+WS
Sbjct: 61  --------LYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDL+NVFE FLPQLLLYPNPSDP NG+AASL+M+DR  Y+ KVKEYCEKYAK      
Sbjct: 121 PMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYAKPEEILS 180

Query: 181 DSEEEDEMSDNESSSSDGD---VTRHADP 207
           D +++D MS++ S S D D   +   ADP
Sbjct: 181 DDDDDDSMSEDGSDSDDDDDDEIVGKADP 183

[Close]

BLAST of Csor.00g156000 vs. ExPASy Swiss-Prot
Match: Q9P7R4 (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.7e-52
Identity = 106/200 (53.00%), Postives = 137/200 (68.50%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSP +R E DVMKL+MSDY V ++ND + EF V FHGP E+                  
Sbjct: 1   MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSET------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                    Y  G+WK+ VELP  YP+KSPSIGFVN+IFHPN+DELSGSVCLDVINQ+WS
Sbjct: 61  --------PYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAE- 180
           PMFD++N+FEVFLPQLL YPN SDPLNG+AA+L++++   Y  KV++Y  +YA +  A+ 
Sbjct: 121 PMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYANKEDADI 174

Query: 181 --DDSEEEDEMSDNESSSSD 198
             +DS ++D MS  ++ S D
Sbjct: 181 TLNDSSDDDTMSSIDTESGD 174

[Close]

BLAST of Csor.00g156000 vs. NCBI nr
Match: KAG6587482.1 (Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 410 bits (1055), Expect = 1.56e-144
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
           AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED
Sbjct: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180

Query: 181 DSEEEDEMSDNESSSSDGDVTRHADP 206
           DSEEEDEMSDNESSSSDGDVTRHADP
Sbjct: 181 DSEEEDEMSDNESSSSDGDVTRHADP 206

[Close]

BLAST of Csor.00g156000 vs. NCBI nr
Match: XP_023530689.1 (ubiquitin-conjugating enzyme E2 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343 bits (879), Expect = 4.22e-118
Identity = 180/206 (87.38%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES                  
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 61  --------LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED
Sbjct: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180

Query: 181 DSEEEDEMSDNESSSSDGDVTRHADP 206
           DSEEEDEMSDNESSSSDGDVTRHADP
Sbjct: 181 DSEEEDEMSDNESSSSDGDVTRHADP 180

[Close]

BLAST of Csor.00g156000 vs. NCBI nr
Match: XP_022928134.1 (ubiquitin-conjugating enzyme E2 5-like [Cucurbita moschata])

HSP 1 Score: 343 bits (879), Expect = 1.02e-116
Identity = 180/206 (87.38%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES                  
Sbjct: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES------------------ 151

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 152 --------LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 211

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED
Sbjct: 212 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 271

Query: 181 DSEEEDEMSDNESSSSDGDVTRHADP 206
           DSEEEDEMSDNESSSSDGDVTRHADP
Sbjct: 272 DSEEEDEMSDNESSSSDGDVTRHADP 271

[Close]

BLAST of Csor.00g156000 vs. NCBI nr
Match: XP_022968845.1 (ubiquitin-conjugating enzyme E2 5-like [Cucurbita maxima])

HSP 1 Score: 341 bits (875), Expect = 4.14e-116
Identity = 179/206 (86.89%), Postives = 179/206 (86.89%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES                  
Sbjct: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES------------------ 151

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 152 --------LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 211

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED
Sbjct: 212 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 271

Query: 181 DSEEEDEMSDNESSSSDGDVTRHADP 206
           DSEEEDEMSDNES SSDGDVTRHADP
Sbjct: 272 DSEEEDEMSDNESGSSDGDVTRHADP 271

[Close]

BLAST of Csor.00g156000 vs. NCBI nr
Match: XP_022988415.1 (ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima])

HSP 1 Score: 310 bits (795), Expect = 3.06e-105
Identity = 167/211 (79.15%), Postives = 174/211 (82.46%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNV+FHGPK+S                  
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVDFHGPKQS------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 61  --------LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN---- 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCE++AK+     
Sbjct: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCERFAKKENDIK 180

Query: 181 -TAEDDSEEEDEMSDNESSSSDGDVTRHADP 206
            T+ED+SEE DEMSDNES SSD DV  HADP
Sbjct: 181 CTSEDESEE-DEMSDNESGSSDDDVAGHADP 184

[Close]

BLAST of Csor.00g156000 vs. ExPASy TrEMBL
Match: A0A6J1EK00 (ubiquitin-conjugating enzyme E2 5-like OS=Cucurbita moschata OX=3662 GN=LOC111435047 PE=3 SV=1)

HSP 1 Score: 343 bits (879), Expect = 4.94e-117
Identity = 180/206 (87.38%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES                  
Sbjct: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES------------------ 151

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 152 --------LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 211

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED
Sbjct: 212 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 271

Query: 181 DSEEEDEMSDNESSSSDGDVTRHADP 206
           DSEEEDEMSDNESSSSDGDVTRHADP
Sbjct: 272 DSEEEDEMSDNESSSSDGDVTRHADP 271

[Close]

BLAST of Csor.00g156000 vs. ExPASy TrEMBL
Match: A0A6J1HYC1 (ubiquitin-conjugating enzyme E2 5-like OS=Cucurbita maxima OX=3661 GN=LOC111467979 PE=3 SV=1)

HSP 1 Score: 341 bits (875), Expect = 2.01e-116
Identity = 179/206 (86.89%), Postives = 179/206 (86.89%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES                  
Sbjct: 92  MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES------------------ 151

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 152 --------LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 211

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED
Sbjct: 212 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 271

Query: 181 DSEEEDEMSDNESSSSDGDVTRHADP 206
           DSEEEDEMSDNES SSDGDVTRHADP
Sbjct: 272 DSEEEDEMSDNESGSSDGDVTRHADP 271

[Close]

BLAST of Csor.00g156000 vs. ExPASy TrEMBL
Match: A0A6J1JJH6 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111485665 PE=3 SV=1)

HSP 1 Score: 310 bits (795), Expect = 1.48e-105
Identity = 167/211 (79.15%), Postives = 174/211 (82.46%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNV+FHGPK+S                  
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVDFHGPKQS------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 61  --------LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN---- 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCE++AK+     
Sbjct: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCERFAKKENDIK 180

Query: 181 -TAEDDSEEEDEMSDNESSSSDGDVTRHADP 206
            T+ED+SEE DEMSDNES SSD DV  HADP
Sbjct: 181 CTSEDESEE-DEMSDNESGSSDDDVAGHADP 184

[Close]

BLAST of Csor.00g156000 vs. ExPASy TrEMBL
Match: A0A6J1C0G2 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007210 PE=3 SV=1)

HSP 1 Score: 307 bits (786), Expect = 3.48e-104
Identity = 166/211 (78.67%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES                  
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKES------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LYE GVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 61  --------LYEAGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN---- 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCE+YAK+     
Sbjct: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCERYAKKENGIK 180

Query: 181 -TAEDDSEEEDEMSDNESSSSDGDVTRHADP 206
            TAED+SEE DE+S+++S SSD DV  HADP
Sbjct: 181 CTAEDESEE-DEISNDDSGSSDDDVAGHADP 184

[Close]

BLAST of Csor.00g156000 vs. ExPASy TrEMBL
Match: A0A6J1E183 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429862 PE=3 SV=1)

HSP 1 Score: 306 bits (783), Expect = 1.03e-103
Identity = 167/212 (78.77%), Postives = 174/212 (82.08%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNV+FHGPK+S                  
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVDFHGPKQS------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS
Sbjct: 61  --------LYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKEN---- 180
           PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCE++AK+     
Sbjct: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCERFAKKENDIK 180

Query: 181 -TAEDDSEEEDEMSDNESSSSDGD-VTRHADP 206
            T+ED+SEE DEMSDNES SSD D V  HADP
Sbjct: 181 CTSEDESEE-DEMSDNESGSSDDDNVAGHADP 185

[Close]

BLAST of Csor.00g156000 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 )

HSP 1 Score: 258.1 bits (658), Expect = 6.1e-69
Identity = 133/199 (66.83%), Postives = 154/199 (77.39%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMD+MKLMMSDY VEMINDG+ EF VEF GPK+SI                 
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSI----------------- 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                    YE GVWKIRVELPDAYPYKSPS+GF+ KI+HPNVDE+SGSVCLDVINQ+WS
Sbjct: 61  ---------YEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDL+NVFE FLPQLLLYPNPSDPLNG+AA+LMM+DR  Y+++VKEYCEKYAK     +
Sbjct: 121 PMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPRADTE 172

Query: 181 DSEEEDEMSDNESSSSDGD 200
           +   +DEMS++E  +SDGD
Sbjct: 181 EMSSDDEMSEDE-YASDGD 172

[Close]

BLAST of Csor.00g156000 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 )

HSP 1 Score: 255.0 bits (650), Expect = 5.2e-68
Identity = 129/199 (64.82%), Postives = 151/199 (75.88%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           MSSPSKRREMD+MKLMMSDY VE INDG+ EF VEF+GPK+S                  
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDS------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LY+ GVWKIRVELPDAYPYKSPS+GF+ KI+HPNVDELSGSVCLDVINQ+WS
Sbjct: 61  --------LYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDL+NVFE FLPQLLLYPNPSDPLNG+AA+LMM+DR  Y+++VKEYCEKYAK     +
Sbjct: 121 PMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKPGEGSE 173

Query: 181 DSEEEDEMSDNESSSSDGD 200
           D   ++E+S+ E  S + D
Sbjct: 181 DKSSDEELSEEEYGSDNED 173

[Close]

BLAST of Csor.00g156000 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 )

HSP 1 Score: 242.7 bits (618), Expect = 2.7e-64
Identity = 127/209 (60.77%), Postives = 150/209 (71.77%), Query Frame = 0


Query: 1   MSSPSKRREMDVMKLMMSDYNVEMINDGLNEFNVEFHGPKESIARLSPLSNMHFVVVDGI 60
           M+SPSKRREMD+MKLMMSDY V+ +ND L  F V FHGP +S                  
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDS------------------ 60

Query: 61  AIICLWVCLYETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWS 120
                   LY+ GVWKI+VELP+AYPYKSPS+GFVNKI+HPNVDE SG+VCLDVINQ+WS
Sbjct: 61  --------LYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWS 120

Query: 121 PMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYAKENTAED 180
           PMFDL+NVFE FLPQLLLYPNPSDP NG+AASL+M+DR  Y+ KVKEYCEKYAK      
Sbjct: 121 PMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYAKPEEILS 180

Query: 181 DSEEEDEMSDNESSSSDGD---VTRHADP 207
           D +++D MS++ S S D D   +   ADP
Sbjct: 181 DDDDDDSMSEDGSDSDDDDDDEIVGKADP 183

[Close]

BLAST of Csor.00g156000 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-17
Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 70  YETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVF 129
           Y  GV+ + +  P  YP+K P + F  K+FHPNV+  +GS+CLD++ + WSP   +  V 
Sbjct: 45  YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVL 104

Query: 130 EVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYA 174
            + +  LL  PNP DPL  + A +   DR +Y+   + + +KYA
Sbjct: 105 -LSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 146

[Close]

BLAST of Csor.00g156000 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-17
Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 70  YETGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVF 129
           Y  GV+ + +  P  YP+K P + F  K+FHPNV+  +GS+CLD++ + WSP   +  V 
Sbjct: 45  YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVL 104

Query: 130 EVFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDEKVKEYCEKYA 174
            + +  LL  PNP DPL  + A +   DR +Y+   + + +KYA
Sbjct: 105 -LSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 146

The following BLAST results are available for this feature:

BLAST of Csor.00g156000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42749	8.6e-68	66.83	Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 S...	[more]
P16577	4.3e-67	63.33	Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1...	[more]
P42748	7.3e-67	64.82	Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 S...	[more]
P42750	3.8e-63	60.77	Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 S...	[more]
Q9P7R4	1.7e-52	53.00	Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of Csor.00g156000 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587482.1	1.56e-144	100.00	Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023530689.1	4.22e-118	87.38	ubiquitin-conjugating enzyme E2 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022928134.1	1.02e-116	87.38	ubiquitin-conjugating enzyme E2 5-like [Cucurbita moschata]	[more]
XP_022968845.1	4.14e-116	86.89	ubiquitin-conjugating enzyme E2 5-like [Cucurbita maxima]	[more]
XP_022988415.1	3.06e-105	79.15	ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima]	[more]

BLAST of Csor.00g156000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK00	4.94e-117	87.38	ubiquitin-conjugating enzyme E2 5-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1HYC1	2.01e-116	86.89	ubiquitin-conjugating enzyme E2 5-like OS=Cucurbita maxima OX=3661 GN=LOC1114679...	[more]
A0A6J1JJH6	1.48e-105	79.15	ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1C0G2	3.48e-104	78.67	ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 OS=Momordica charantia OX...	[more]
A0A6J1E183	1.03e-103	78.77	ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 OS=Cucurbita moschata OX=...	[more]

BLAST of Csor.00g156000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63800.1	6.1e-69	66.83	ubiquitin-conjugating enzyme 5	[more]
AT5G41340.1	5.2e-68	64.82	ubiquitin conjugating enzyme 4	[more]
AT2G46030.1	2.7e-64	60.77	ubiquitin-conjugating enzyme 6	[more]
AT1G64230.1	1.9e-17	37.50	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	1.9e-17	37.50	ubiquitin-conjugating enzyme 28	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 40..174 e-value: 3.7E-37 score: 139.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..193
None	No IPR available	PANTHER	PTHR24068:SF332	UBIQUITIN-CONJUGATING ENZYME E2-23 KDA-LIKE	coord: 3..44
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..44
None	No IPR available	PANTHER	PTHR24068:SF332	UBIQUITIN-CONJUGATING ENZYME E2-23 KDA-LIKE	coord: 68..206
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 68..206
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 4..184 e-value: 7.1E-44 score: 151.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 69..175
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 68..168 e-value: 9.4E-33 score: 112.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 11..174 score: 36.877476
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 7..169 e-value: 1.22511E-44 score: 143.497
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 99..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g156000.m01	Csor.00g156000.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity