Csor.00g155450 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g155450
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr09: 7540148 .. 7540495 (-)
RNA-Seq ExpressionCsor.00g155450
SyntenyCsor.00g155450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGTGAAGCAGAGTGAACATGTAGTTTGTGAGATCTGCATTTCGAACCATCTCCGCAAGGGCGGAGATAGCCCGACCATTCAATATTTCCCCATGGTTTTCGTTCTCGACAATTCCCCACCACACCGGAAGCTCAAACCCTTCTACACCAAGCAAGTTTCAAAGCTTAAGCCAGCTGCAATTGCCCTTGAATGGTTACCTGCATTGCAGGAGAAACTGCATCTAATGGCAATCCAACATACAATTTTCACCCCCCTCAAGCTGCAAAAAAATGAGCAGAAGCTCGTCAGTGATGAACTTAAGCAGGCACAATCAAATATGGTGAACTTGGGGGGGGAATACTAA

mRNA sequence

ATGGGTGTGAAGCAGAGTGAACATGTAGTTTGTGAGATCTGCATTTCGAACCATCTCCGCAAGGGCGGAGATAGCCCGACCATTCAATATTTCCCCATGGTTTTCGTTCTCGACAATTCCCCACCACACCGGAAGCTCAAACCCTTCTACACCAAGCAAGTTTCAAAGCTTAAGCCAGCTGCAATTGCCCTTGAATGGTTACCTGCATTGCAGGAGAAACTGCATCTAATGGCAATCCAACATACAATTTTCACCCCCCTCAAGCTGCAAAAAAATGAGCAGAAGCTCGTCAGTGATGAACTTAAGCAGGCACAATCAAATATGGTGAACTTGGGGGGGGAATACTAA

Coding sequence (CDS)

ATGGGTGTGAAGCAGAGTGAACATGTAGTTTGTGAGATCTGCATTTCGAACCATCTCCGCAAGGGCGGAGATAGCCCGACCATTCAATATTTCCCCATGGTTTTCGTTCTCGACAATTCCCCACCACACCGGAAGCTCAAACCCTTCTACACCAAGCAAGTTTCAAAGCTTAAGCCAGCTGCAATTGCCCTTGAATGGTTACCTGCATTGCAGGAGAAACTGCATCTAATGGCAATCCAACATACAATTTTCACCCCCCTCAAGCTGCAAAAAAATGAGCAGAAGCTCGTCAGTGATGAACTTAAGCAGGCACAATCAAATATGGTGAACTTGGGGGGGGAATACTAA

Protein sequence

MGVKQSEHVVCEICISNHLRKGGDSPTIQYFPMVFVLDNSPPHRKLKPFYTKQVSKLKPAAIALEWLPALQEKLHLMAIQHTIFTPLKLQKNEQKLVSDELKQAQSNMVNLGGEY
Homology
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BLAST of Csor.00g155450 vs. NCBI nr
Match: KAG6592241.1 (hypothetical protein SDJN03_14587, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233 bits (594), Expect = 3.28e-77
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MGVKQSEHVVCEICISNHLRKGGDSPTIQYFPMVFVLDNSPPHRKLKPFYTKQVSKLKPA 60
           MGVKQSEHVVCEICISNHLRKGGDSPTIQYFPMVFVLDNSPPHRKLKPFYTKQVSKLKPA
Sbjct: 1   MGVKQSEHVVCEICISNHLRKGGDSPTIQYFPMVFVLDNSPPHRKLKPFYTKQVSKLKPA 60

Query: 61  AIALEWLPALQEKLHLMAIQHTIFTPLKLQKNEQKLVSDELKQAQSNMVNLGGEY 115
           AIALEWLPALQEKLHLMAIQHTIFTPLKLQKNEQKLVSDELKQAQSNMVNLGGEY
Sbjct: 61  AIALEWLPALQEKLHLMAIQHTIFTPLKLQKNEQKLVSDELKQAQSNMVNLGGEY 115

The following BLAST results are available for this feature:
BLAST of Csor.00g155450 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g155450 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6592241.13.28e-77100.00hypothetical protein SDJN03_14587, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g155450 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g155450 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g155450.m01Csor.00g155450.m01mRNA