Csor.00g154840 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g154840
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr19: 183307 .. 186128 (+)
RNA-Seq ExpressionCsor.00g154840
SyntenyCsor.00g154840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGGGAAGGAATTAGGGAATATCCGAATTCCCCCAAGCGTCCATTCTGTTTAGGGTAAACGTAAGTTGAATGTAATTGAAAATTCCAAAAGCTGTATTCCATTTTTTGTTCAATCTCCAAACGCTTGGCAGAAGTTGGAACATTGCCTTCAAGAACACACACAACCTGCATAAGCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTTCGATTGTGTCTGACTCGGTTCAATCTCCAACCCGTTCAACTCATCCCTCTCGGACTGTTGGGGCCTTAAATCTTGATTGCAGCAATCCAACGCTACCCTTTTTCTGTCCTCCGTATCTGCAATCTGAGCAACACACCGCTAATTTCTTCTTCTTTCGCGGCTTTCTTTCTCCCAGGTATAACTACTACTTCTTTTCATCTTCTTCTACAATGCTGCCTCAATACAATTTACACCCATTTTACAATTTCTCCTTATTGTTCATCAATTCTTGAATTTTCTTTTTGAATCGGCACGTTCTTCCGGTTGAATTCGAGGCTGGTTTGACTTCGAATGCAAATTTCTGATGTATTTTATTCGTTTCTTTCCCCCCGAGTTTGCGGGCGTTTGAGTAAATGGCACGATTATGAGTTCATTCGAGTTTGCATCCTTTTTTCCCCTCCGTAATTTTTAGGTTTTGCTATAATTTGTGATTGTCTTGGGATTCGATGTTGGGTTTTAAATTGATTTGCGTACCTTAGGTTTGTTGGCTAGAATTTCCTCGATATTTGAGTCTGAGAAGTTCAATTCATGCGGATATATAGCCTGGAAGTTTGAAGCCAGTTTAGGTGCAGGGGCTCGGGATCATGCACAAACAGATGGACTTGTTACCGCATTATCAATTCTGTTTCTTCTTTTTGAGTCTTGATCTTAGTTTGAGTGGGAAAATTTTGATCAGAATTCTGCTGCCTTGAGTGCCATGAGTACCTCCTGCTATTCCGATTATCAGTTCATATTTGGCAAATTCAAGCGTTCTTCTTTAGTCTATATTCAAGACTAAGTCTAGAATGATATCATCAAATAAAGAAACGCGGCGTAGGGTGAGATATTATGTAACAACCCAAACCCACCGTTAACAGATATTGTCATGGGTTTTCTTTCAGGCTTCTCTTAAAGATCTTTAAAACGCGTTTGCTAGGGAGAGGTTTCTACATTCTTATAAATTATGTTTTGTTCCCCTCTCCAACTGATGTGGGATCTTACAATCCATTCCTCTTTGGGGTCTATCGTCCTTGCTAGCACACCGTTTGGTGTCCACGCCCCTTTGGGGTTCAACCTCTTCGCTAGCATGTCGCTCGGTGTCTGGCTCTAATACCATTTGTAACAGCCCAACCTCACTCAAACTCACTGCTAGTAGATATTGTCTCTTTGGGCTTTCCTTTCTAGGCTTCCCCTCAAAGTTTCTAAAACGCGTCTGCTAGGGAGAGGTTTTCACATTCTTATAAATTATGTTTTGTTCCCCTCTCCAACCGATGTGGGATCTCACATATTAGATAGATTTTCTCGGCCATTGGAATGATTTATATAGATTTTCTGCATCAAAAACTGTTTAGAAGCTCCATTGAAATGTAAGGGTTCAAAAATGAATCACTTTTATAGTTGTTTATCATTTTTCCCACCGTTGCGAACATTTATCGTTTATCTTAATTTGATACCTTTTTCTTTGTTCAATTTTGTCTTGCATATATTCATGTCTTCCCTATCCAGGAAAACAAATTGTTTCTTTTACCATCTGATCTTATTGATTTAAGTAATGGTCGTTCAGACATTGTCTTTGGACTTTGTAGCTTAAGCTCATGGACAAGTTTATTTTCTGCCTTAGACTATTTGTGTGAGATCCCCACATTGATTCGAGAGAGGAACGAGTGCCAGCAAGAATGTTGAGCCCCGAAGGGGTGGATTGTGAGATCCCACTTTGGCAGGAGAGGAGAATGGAGTATTCTTTATAAGGGTGTGAAAACTTTTCCCTAGCAGACACATTTTAAAAACCTTGAGGGGAAACCCGAAAGTGAAAATCCAAAGAGGACAACATCTACTAGCGGTGGGCATGGGCTGTTACAACTTGGGTACTAGAAACTAGAAACTAGAAACATCATGCCGTGCATTTACATGGGAACCCCCATGTATGGAGTGATTAGTTTAGCTCATGTTTGTCATGTTCAAAACCACTCCCAAACATGTATTTAATCATTCAAAATCAATTTTTGATGGTATAAAATATTACCCATTTTTATTGAGAATGAGATTACTCTTTTCTGATCACCGGCCATTTATTGGTTAATTTCACAATAGTGTTAGTCAGAAATTTGAATATTGATTATATTAATAGCATTATATCCACTTTTTTTTTTTTTTTTTCTTTTCATATGCTTGTCATTCAAGCAGTTTTTCCTTTTTCTAGATGGTTAAGACCTTCTATGTTTTGGAATCTATATCGAACTCTTATAACGACTTCGTTCATAGACATCACATGGTAAGCATACATCCATCACCGTGTTGTGTCATGAGTGTCTGTTTATAGGTTAAAAATTCAATTATCAGTTCTGTAAGATTTTCCGATCATCAGGAAGGATGGAGACTCTTCTCTAATCAGTTACATGAATTCATGCTATAAGAAGCAGTAATTTTCTCCTATAGACCATGTGACTGTTTGGTTTTGTTTGGTTCTTCTGTATGTTACCATATTGTCAGTGTATGCTAAAAGATGCTTTCTTTTCATCTTCTAAATTGTTACCTAATGTTGGCATCACAGATTACTTGCTTCCTGA

mRNA sequence

ATGAAAGGGGAAGGAATTAGGGAATATCCGAATTCCCCCAAGCGTCCATTCTGTTTAGGAAGTTGGAACATTGCCTTCAAGAACACACACAACCTGCATAAGCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTTCGATTGTGTCTGACTCGGTTCAATCTCCAACCCGTTCAACTCATCCCTCTCGGACTGTTGGGGCCTTAAATCTTGATTGCAGCAATCCAACGCTACCCTTTTTCTGTCCTCCGTATCTGCAATCTGAGCAACACACCGCTAATTTCTTCTTCTTTCGCGGCTTTCTTTCTCCCAGATTACTTGCTTCCTGA

Coding sequence (CDS)

ATGAAAGGGGAAGGAATTAGGGAATATCCGAATTCCCCCAAGCGTCCATTCTGTTTAGGAAGTTGGAACATTGCCTTCAAGAACACACACAACCTGCATAAGCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTTCGATTGTGTCTGACTCGGTTCAATCTCCAACCCGTTCAACTCATCCCTCTCGGACTGTTGGGGCCTTAAATCTTGATTGCAGCAATCCAACGCTACCCTTTTTCTGTCCTCCGTATCTGCAATCTGAGCAACACACCGCTAATTTCTTCTTCTTTCGCGGCTTTCTTTCTCCCAGATTACTTGCTTCCTGA

Protein sequence

MKGEGIREYPNSPKRPFCLGSWNIAFKNTHNLHKLPSSSSSSSSSSSSSSLLLSIVSDSVQSPTRSTHPSRTVGALNLDCSNPTLPFFCPPYLQSEQHTANFFFFRGFLSPRLLAS
Homology
[Close]
BLAST of Csor.00g154840 vs. NCBI nr
Match: KAG6571461.1 (hypothetical protein SDJN03_28189, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226 bits (576), Expect = 1.97e-74
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MKGEGIREYPNSPKRPFCLGSWNIAFKNTHNLHKLPSSSSSSSSSSSSSSLLLSIVSDSV 60
           MKGEGIREYPNSPKRPFCLGSWNIAFKNTHNLHKLPSSSSSSSSSSSSSSLLLSIVSDSV
Sbjct: 1   MKGEGIREYPNSPKRPFCLGSWNIAFKNTHNLHKLPSSSSSSSSSSSSSSLLLSIVSDSV 60

Query: 61  QSPTRSTHPSRTVGALNLDCSNPTLPFFCPPYLQSEQHTANFFFFRGFLSPRLLAS 116
           QSPTRSTHPSRTVGALNLDCSNPTLPFFCPPYLQSEQHTANFFFFRGFLSPRLLAS
Sbjct: 61  QSPTRSTHPSRTVGALNLDCSNPTLPFFCPPYLQSEQHTANFFFFRGFLSPRLLAS 116

The following BLAST results are available for this feature:
BLAST of Csor.00g154840 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g154840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6571461.11.97e-74100.00hypothetical protein SDJN03_28189, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g154840 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g154840 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g154840.m01Csor.00g154840.m01mRNA