Csor.00g154780 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g154780
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRibosome-recycling factor, chloroplastic
LocationCsor_Chr19: 209259 .. 212824 (-)
RNA-Seq ExpressionCsor.00g154780
SyntenyCsor.00g154780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGAGTCTTTTTAAATTTATATCTCGAGAGGATTAATGTTGTTTAAATGATCGAGTCTTTTTAAATTTGTATCTCGAGAGGACTACGTGACTTACGGACTGTTTCAATGATTTAGTCTCTTAAATTTATATCTCGAGAGAACTATGTGACTTGAAGATTATTTAAATGATCGATTTTTTTAAGTTTATATCACGAAAGGACTATGTGACCTACAGACTGTTTAAATAATCAAGTATTTTAAATTTTTATCTCGAGAGGACTGTGTGACCTACAAATTGTTTAAATGATCGAGTCTTTTGAATTTATATTTTGAGAGAACCACGTGACCTACAAATTGTCTAAATAATTAAGTCATAGTCTCAAGTTGTGTCGTTTTTTAAGGTATTTTCGAAACACGTAAGTCCATGACTGTGTTTTAAACTAAAAGTTTAAATGAAGTATTTCTACATTCAATATTTATGATATTTATACAATAACAACCTTAAATTCAGTAGAAAATTTTGATTCGTTACATTTAAGTATCTCAAAAGAACAACGTGACTTACAGATTGTTTAAATGATCGAGTCTTTTAAATTTATATCTCGAGAGAATTACATGACCTACACAGATTGTTTAAATAATCTAGTTTTTTAAATTTATATTCCGAGATTATTACGTGACATGTAGATGATCTAGATATTAGTTTAATATCAGTTAAATAATTATTACAAAAAAAACAAACACGTGGCATAATTTATTGTACTTTTACGTGTCTCTCTCTGTTTCTTTGACTTTTTTTTTTTAATTATTAACATCATTATCGAGTCCCTTAATTCCTCCATTAATTAGGCGTTTTACTTTTTTCATTCCTAACCTTGATAAGTATTTGTTCTGTCCAGTCACGGAATACTGTATTCGTCGCATCCAAACACCCTTCGCTGATGCCAAAATTTCTAAATCAATTTCTTATCCACCAGCTGTCAAGGATTTGAATTTGGCCCAGCCGCGATCTGCTACTCATCGTTTAACCACCCGCCTTATCATCTCCGATTCGTTCGTTTACGCTGCCATGGCGGCGCCTTTCTCCCTCCGCCACCACTGTCCGCTTCGTCCTACGCCTCTCTAAGTCCTTTCTTTCAATCCGAGGTTCGTCTCGCTTCGACATTTCTGTTCGTTTGTTTATTGATGATTTCTTCTTCCCCCAATCGGCCTCCTTCTAGGGTTTAATTTCTATTTTTTTGCCTTAATTTCATGTTTAAAGGATATTTAGTTATGAATTATAGTTATCATATATATCATATTTGATCGAATTTCATTAAATGTGCGGTGGTTTTAGCAAATATTCTCAAAAATTGTTGAAGATTATTGGGAGGGAGTCACACGTTGGGAATGCTCATGGATATACAAGTAAGGAATACATCTCCATTGGTACGAGGCCTTTTGGTCTCCAAAAGCAAATCTATGAGAGTTTATGCTCAAAGTGGACAATATAATACCATTGTGTAGAGTTGTTTGGTAAAATCAAGTCCACCGCGTAGACATTCATAAACTGGATATTCATCAAGTCAAATTATCTGTATGATACGTAATCCATGATCATGTTTGCGAAAACGTAAAAAATCAAAGTATCTTGGTCCTATCGCATGAGTTAATCTGAAAGTGATTCCTAACAAAAACCAGTAGAAAAGAAGTTTTTTTTATGTATTATCCTTTGCATGTTCATCTTAAGATGCAGTTCTTCGATTCCTTGTCTAGTCTTCTGATATTATTGTGAAAGTAGCACTCTGTAATGATAGCACTTTGTAATGATTGTGGATTGTTGGGAGGGAGTTTGGCTAATTTAGGGAATGATTATGAGTTTATAAGTAAGGAATACATTTCCATTGGTACGAGGCCTTTTGGGAAGCCCAAAGTAAAGCCATGAGAGCTTATGGTAGACAATATCATACCATTGTGAAGAGTCTTGATTCCTAATAAATACACACATAATATACATAAACTTGCCCTTGCCGTGTTCGTGCTCTAGATTTGTAAAAAACGACGCGTCATGTTGTATTTATATCCATGCTTATTGGATACATTTGTTTTGAGATTATGATTTCTAGATTTAATGCAAATTCCTAAGGTTTAGTCTCAATATGCAAACATGACACTTATGAGATGAAATGTTACACATTGTTAGCATTTGACTGTGGATGATAAAGCCAGTACCACACTTTTTCATTGGATTTAATGCTTAAACTGCTACTGATATGTTAGGATCGCACACCAACGCGCACACGCGCACACTCATCAACATGAACACAAAAGAACAGGAGAGAAAATTCAAGGAGGAATATTGGTTAAAGATTTTATGGATGATTTTAGGTATGTATACCAACCAACAGAATCAACAAAATACATTTTAAAAGCACGGCCTAATGGATATATATACGAAATATAATCTACCGCATATATATATATATACACACCAGATCTTTACAAAATATGTACCACATATATCTCTGCGTGATTTTTTTTTTACTATAAATAGGAGGGAAACATGATCATGAACTCTTGGATGATATCCTGCATCTGTTTGTTTATAGGTGGCAATGAGAAATATAAGAAGAGATGCTTTGAAAGCGTATGAAAAACTGGAAAAGGTCAGCAAAGCATACATCTGATAACCTAATCTTGTGGTGCTTTTATTCTGATTTAAAGTTTTATTGATCTGCCTTCCCAAGACCAAGCTCCTTTATCCTTAAATGTTTTTATCATTCGTGTCAGGAGAAAGAACTTTGGGAAGATAATGTGAGAGACTTGTCAAGTGACGTGCAGGTTCGTTGTTGCTTCTCTTAACTCACTTAGTTAAGAGCTTTTGGTCCTACGTCACTATTTTCAATTAATATTCAAGTAGCTTCACACATAAGACTAGGGAGGAACTGAGGATGCAGTGTGAGTTCTCACATCGATCAGCGAGAAGAGCGAGGAGAGCGAAGCATTCTTTATATGGGTGTGGAAACCTCTCCCTAGCAAACACGTTTTAAATATCTTGAGGGGAAGCTCGAAAGGAAGAGTCCAAACCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTAGGCTGTTACAAATGGTATCAGTGTTAGACACCGGGCGGTGTGCCCACGAGGACAGTGAGCCCCGAAGAGGGTGGATATCGTGTGATGTGCCAGTAAGGATGTTGGGTCTCGAAGGGGAGGATGGATTGTAAAATCTCACATCGATTGGAGAAGAGAACGAAACATTTTTTATATGGGTGTGAAACCCTCTCCCGATCATCCAAGTTAAAGATGATTTGGTTGTGGGCAGAAACTGTCTGATGACTGGATGAAGAAGGTTGATGGCATTTACGAACAGAAAGAGAAGGTATAATGAACTTCTTTTTGGTATCAGAACTATAATCAAAGCCTACAAGATTCTATTCTGTTCCATTCACTGATATTAAGTATTTGCAAGATCACTGAAGAACCCATTTGATTAGCCAACCACTATTATGTTTGTACCATAATCATAATAATCAACATGCATTTGTATTGTATTTCAGGAGCCGTTGAAGCCGTGA

mRNA sequence

ATGACCGCGATCTGCTACTCATCGTTTAACCACCCGCCTTATCATCTCCGATTCGTTCGTTTACGCTGCCATGGCGGCGCCTTTCTCCCTCCGCCACCACTGTCCGCTTCGTCCTACGCCTCTCTAAGTCCTTTCTTTCAATCCGAGGTGGCAATGAGAAATATAAGAAGAGATGCTTTGAAAGCGTATGAAAAACTGGAAAAGGAGAAAGAACTTTGGGAAGATAATGTGAGAGACTTGTCAAGTGACGTGCAGGAGCCGTTGAAGCCGTGA

Coding sequence (CDS)

ATGACCGCGATCTGCTACTCATCGTTTAACCACCCGCCTTATCATCTCCGATTCGTTCGTTTACGCTGCCATGGCGGCGCCTTTCTCCCTCCGCCACCACTGTCCGCTTCGTCCTACGCCTCTCTAAGTCCTTTCTTTCAATCCGAGGTGGCAATGAGAAATATAAGAAGAGATGCTTTGAAAGCGTATGAAAAACTGGAAAAGGAGAAAGAACTTTGGGAAGATAATGTGAGAGACTTGTCAAGTGACGTGCAGGAGCCGTTGAAGCCGTGA

Protein sequence

MTAICYSSFNHPPYHLRFVRLRCHGGAFLPPPPLSASSYASLSPFFQSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQEPLKP
Homology
[Close]
BLAST of Csor.00g154780 vs. ExPASy Swiss-Prot
Match: Q9M1X0 (Ribosome-recycling factor, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RRF PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-09
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 32  PPLSASSYASLSPFF-----QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQE 87
           PPL++     LS        + +VA+RNIRRDALK+Y+KLEKEK+L EDNV+DLSSD+Q+
Sbjct: 193 PPLTSDRRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQK 252

[Close]
BLAST of Csor.00g154780 vs. ExPASy Swiss-Prot
Match: P82231 (Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea OX=3562 GN=RRF PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.8e-09
Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 32  PPLSASSYASLSPFF-----QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQE 87
           PPL++     L+        + +VA+RNIRRDALK+YEKLEKEK+L EDNV+DLS+D+Q+
Sbjct: 189 PPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQK 248

[Close]
BLAST of Csor.00g154780 vs. ExPASy Swiss-Prot
Match: P37706 (Ribosome-recycling factor, chloroplastic (Fragment) OS=Daucus carota OX=4039 GN=RRF PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-08
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 0 

Query: 32  PPLSASSYASLSPFF-----QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQE 87
           P L+A     LS        + +VA+RNIRRDA+K+Y+KLEKEK+L EDNV+DLSSD+Q+
Sbjct: 145 PQLTADRRKELSKIVAKQAEEGKVALRNIRRDAIKSYDKLEKEKKLSEDNVKDLSSDLQK 204

[Close]
BLAST of Csor.00g154780 vs. ExPASy Swiss-Prot
Match: A2YMU2 (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26546 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-08
Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 32  PPLSASSYASLSPFF-----QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQE 87
           PPL++     L+        + +VA+RNIRRDA+KAY+KLEKEK+L EDNV+DLS+D+Q+
Sbjct: 184 PPLTSDRRKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQK 243

[Close]
BLAST of Csor.00g154780 vs. ExPASy Swiss-Prot
Match: A3BLC3 (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0570700 PE=2 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-08
Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 32  PPLSASSYASLSPFF-----QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQE 87
           PPL++     L+        + +VA+RNIRRDA+KAY+KLEKEK+L EDNV+DLS+D+Q+
Sbjct: 184 PPLTSDRRKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQK 243

[Close]
BLAST of Csor.00g154780 vs. NCBI nr
Match: KAG6571467.1 (Ribosome-recycling factor, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184 bits (467), Expect = 1.25e-58
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MTAICYSSFNHPPYHLRFVRLRCHGGAFLPPPPLSASSYASLSPFFQSEVAMRNIRRDAL 60
          MTAICYSSFNHPPYHLRFVRLRCHGGAFLPPPPLSASSYASLSPFFQSEVAMRNIRRDAL
Sbjct: 1  MTAICYSSFNHPPYHLRFVRLRCHGGAFLPPPPLSASSYASLSPFFQSEVAMRNIRRDAL 60

Query: 61 KAYEKLEKEKELWEDNVRDLSSDVQEPLKP 90
          KAYEKLEKEKELWEDNVRDLSSDVQEPLKP
Sbjct: 61 KAYEKLEKEKELWEDNVRDLSSDVQEPLKP 90

[Close]
BLAST of Csor.00g154780 vs. NCBI nr
Match: XP_010545089.1 (PREDICTED: ribosome-recycling factor, chloroplastic [Tarenaya hassleriana])

HSP 1 Score: 63.9 bits (154), Expect = 1.30e-09
Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 0 

Query: 32  PPLSASSYASLSPFF-----QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQ 85
           PPL+A     LS        + +VA+RNIRRDALKAYEKLEKEK+L EDNV+DLSSD+Q
Sbjct: 197 PPLTAERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQ 255

[Close]
BLAST of Csor.00g154780 vs. NCBI nr
Match: WP_152921544.1 (ribosome recycling factor, partial [Escherichia coli] >MQL10553.1 ribosome recycling factor [Escherichia coli])

HSP 1 Score: 61.6 bits (148), Expect = 1.49e-09
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 47  QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQ 85
           + +VA+RNIRRDALKAYEKLEKEK+L EDNV+DLSSD+Q
Sbjct: 82  EGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQ 120

[Close]
BLAST of Csor.00g154780 vs. NCBI nr
Match: PNX97515.1 (ribosome-recycling factor chloroplastic-like, partial [Trifolium pratense])

HSP 1 Score: 60.5 bits (145), Expect = 1.98e-09
Identity = 30/39 (76.92%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 47 QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQ 85
          + +VA+RNIRRDALKAYEKLEK+K+L EDNV+DLSSD+Q
Sbjct: 49 EGKVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQ 87

[Close]
BLAST of Csor.00g154780 vs. NCBI nr
Match: PKI60552.1 (hypothetical protein CRG98_019028 [Punica granatum])

HSP 1 Score: 61.6 bits (148), Expect = 2.76e-09
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 47  QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQ 85
           + +VA+RNIRRDALKAYEKLEKEK+L EDNV+DLSSD+Q
Sbjct: 111 EGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQ 149

[Close]
BLAST of Csor.00g154780 vs. ExPASy TrEMBL
Match: A0A0E0LMF5 (Ribosome-recycling factor, chloroplastic OS=Oryza punctata OX=4537 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.09e-10
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 0 

Query: 29 LPPPPLSASSYASLSPFFQSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQ 85
          L PP   A + A L+   +S+VA+RNIRRDA+KAY+KLEKEK+L EDNV+DLS+D+Q
Sbjct: 10 LSPPQELAKTVAKLAE--ESKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQ 64

[Close]
BLAST of Csor.00g154780 vs. ExPASy TrEMBL
Match: A0A803NRH9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.78e-10
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 47  QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQ 85
           + +VA+RNIRRDALKAYEKLEKEK+L EDNV+DLSSD+Q
Sbjct: 88  EGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQ 126

[Close]
BLAST of Csor.00g154780 vs. ExPASy TrEMBL
Match: A0A2K3N386 (Ribosome-recycling factor, chloroplastic (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g020744 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 9.60e-10
Identity = 30/39 (76.92%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 47 QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQ 85
          + +VA+RNIRRDALKAYEKLEK+K+L EDNV+DLSSD+Q
Sbjct: 49 EGKVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQ 87

[Close]
BLAST of Csor.00g154780 vs. ExPASy TrEMBL
Match: A0A2I0JWC1 (Ribosome-recycling factor, chloroplastic OS=Punica granatum OX=22663 GN=CRG98_019028 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.33e-09
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 47  QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQ 85
           + +VA+RNIRRDALKAYEKLEKEK+L EDNV+DLSSD+Q
Sbjct: 111 EGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQ 149

[Close]
BLAST of Csor.00g154780 vs. ExPASy TrEMBL
Match: A0A0D2QS93 (Ribosome-recycling factor, chloroplastic OS=Gossypium raimondii OX=29730 GN=B456_007G137300 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.04e-09
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 47  QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQ 85
           + +VA+RNIRRDALKAYEKLEKEK+L EDNV+DLSSD+Q
Sbjct: 116 EGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQ 154

[Close]
BLAST of Csor.00g154780 vs. TAIR 10
Match: AT3G63190.1 (ribosome recycling factor, chloroplast precursor )

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 32  PPLSASSYASLSPFF-----QSEVAMRNIRRDALKAYEKLEKEKELWEDNVRDLSSDVQE 87
           PPL++     LS        + +VA+RNIRRDALK+Y+KLEKEK+L EDNV+DLSSD+Q+
Sbjct: 193 PPLTSDRRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQK 252

The following BLAST results are available for this feature:
BLAST of Csor.00g154780 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M1X03.0e-0956.67Ribosome-recycling factor, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RRF ... [more]
P822318.8e-0955.00Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea OX=3562 GN=RRF PE=... [more]
P377061.5e-0855.00Ribosome-recycling factor, chloroplastic (Fragment) OS=Daucus carota OX=4039 GN=... [more]
A2YMU22.0e-0853.33Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. indica OX=39946 ... [more]
A3BLC32.0e-0853.33Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. japonica OX=3994... [more]
BLAST of Csor.00g154780 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6571467.11.25e-58100.00Ribosome-recycling factor, chloroplastic, partial [Cucurbita argyrosperma subsp.... [more]
XP_010545089.11.30e-0962.71PREDICTED: ribosome-recycling factor, chloroplastic [Tarenaya hassleriana][more]
WP_152921544.11.49e-0979.49ribosome recycling factor, partial [Escherichia coli] >MQL10553.1 ribosome recyc... [more]
PNX97515.11.98e-0976.92ribosome-recycling factor chloroplastic-like, partial [Trifolium pratense][more]
PKI60552.12.76e-0979.49hypothetical protein CRG98_019028 [Punica granatum][more]
BLAST of Csor.00g154780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0E0LMF51.09e-1061.40Ribosome-recycling factor, chloroplastic OS=Oryza punctata OX=4537 PE=3 SV=1[more]
A0A803NRH98.78e-1079.49Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2K3N3869.60e-1076.92Ribosome-recycling factor, chloroplastic (Fragment) OS=Trifolium pratense OX=575... [more]
A0A2I0JWC11.33e-0979.49Ribosome-recycling factor, chloroplastic OS=Punica granatum OX=22663 GN=CRG98_01... [more]
A0A0D2QS932.04e-0979.49Ribosome-recycling factor, chloroplastic OS=Gossypium raimondii OX=29730 GN=B456... [more]
BLAST of Csor.00g154780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G63190.12.2e-1056.67ribosome recycling factor, chloroplast precursor [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..83
IPR036191RRF superfamilyGENE3D1.10.132.20coord: 46..89
e-value: 2.3E-11
score: 45.7
IPR036191RRF superfamilySUPERFAMILY55194Ribosome recycling factor, RRFcoord: 48..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g154780.m01Csor.00g154780.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0050832 defense response to fungus
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0032544 plastid translation
cellular_component GO:0009507 chloroplast