Csor.00g154650 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g154650
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	zinc transporter 5
Location	Csor_Chr19: 296749 .. 297216 (-)
RNA-Seq Expression	Csor.00g154650
Synteny	Csor.00g154650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTTTGATGATACCCGAGATAGATGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTGTTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTTCTTCGCCCCACGGGCATGGGCACGACCACGACCACAACCACGACCACGACCATGGGCATGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGGCAAGTGGATAGCGAATGCGTGTGCGATGCATTAGCTCATTTGGCTAACTTCATGGTGCGTCCCTCACATGTGTTTACCGTGGCCATAACAGAAGATTGCGTTGTCACTTACTCGTGTATTGGACGAATTAAGATTTGA

mRNA sequence

ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTTTGATGATACCCGAGATAGATGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTGTTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTTCTTCGCCCCACGGGCATGGGCACGACCACGACCACAACCACGACCACGACCATGGGCATGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGGCAAGTGGATAGCGAATGCGTGTGCGATGCATTAGCTCATTTGGCTAACTTCATGGTGCGTCCCTCACATGTGTTTACCGTGGCCATAACAGAAGATTGCGTTGTCACTTACTCGTGTATTGGACGAATTAAGATTTGA

Coding sequence (CDS)

ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTTTGATGATACCCGAGATAGATGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTGTTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTTCTTCGCCCCACGGGCATGGGCACGACCACGACCACAACCACGACCACGACCATGGGCATGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGGCAAGTGGATAGCGAATGCGTGTGCGATGCATTAGCTCATTTGGCTAACTTCATGGTGCGTCCCTCACATGTGTTTACCGTGGCCATAACAGAAGATTGCGTTGTCACTTACTCGTGTATTGGACGAATTAAGATTTGA

Protein sequence

MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

Homology

[Close]

BLAST of Csor.00g154650 vs. NCBI nr
Match: KAG6571480.1 (hypothetical protein SDJN03_28208, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011243.1 hypothetical protein SDJN02_26146, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313 bits (802), Expect = 1.23e-107
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI 60
           MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI
Sbjct: 1   MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI 60

Query: 61  SPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDA 120
           SPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDA
Sbjct: 61  SPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDA 120

Query: 121 LAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           LAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
Sbjct: 121 LAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155

[Close]

BLAST of Csor.00g154650 vs. NCBI nr
Match: XP_022967638.1 (uncharacterized protein LOC111467082 [Cucurbita maxima])

HSP 1 Score: 266 bits (680), Expect = 4.45e-89
Identity = 135/155 (87.10%), Postives = 142/155 (91.61%), Query Frame = 0


Query: 1   MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI 60
           MGRLEFAY  AALLFVLALM P+I+AQAWSYPPKPLCSSQFALASYACARLPLN EPLPI
Sbjct: 1   MGRLEFAYASAALLFVLALMTPKIEAQAWSYPPKPLCSSQFALASYACARLPLNLEPLPI 60

Query: 61  SPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDA 120
           SPP SPH    +  H H H+HGHGHHRGHHHGHHHR+RSPIEEECCRWARQVD+ECVCDA
Sbjct: 61  SPPPSPHV---EEGHRHGHEHGHGHHRGHHHGHHHRNRSPIEEECCRWARQVDNECVCDA 120

Query: 121 LAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           LAHLANFMVRPSHVFTVAITEDC+VTYSCIGRIKI
Sbjct: 121 LAHLANFMVRPSHVFTVAITEDCIVTYSCIGRIKI 152

[Close]

BLAST of Csor.00g154650 vs. NCBI nr
Match: XP_022155619.1 (uncharacterized protein LOC111022709 [Momordica charantia])

HSP 1 Score: 205 bits (521), Expect = 9.35e-65
Identity = 108/165 (65.45%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 1   MGRLEFAYTLAALLFVLALMIPEIDAQAWSYP-----PKPLCSSQFALASYACARLPLNP 60
           MGR + A+ LAAL  ++  +IP+++ QAWS P     P+PLCSSQFALASYACARLPLNP
Sbjct: 1   MGRFKIAHLLAALCVLV--LIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNP 60

Query: 61  EPLPISPPSSP-----HGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWAR 120
           EP+PI PP SP     HGHGH H H H    GHGH   HHH   H + SP+ EECCRWAR
Sbjct: 61  EPIPILPPPSPVDEDGHGHGHGHGHGH----GHGHQHQHHHRRRHHTHSPVAEECCRWAR 120

Query: 121 QVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           +VDSECVCDAL HLANF++RPSH FTVAIT+DC+VTYSC GRIKI
Sbjct: 121 EVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIKI 159

[Close]

BLAST of Csor.00g154650 vs. NCBI nr
Match: ONH93644.1 (hypothetical protein PRUPE_8G243700 [Prunus persica] >VVA14005.1 PREDICTED: histidine-rich [Prunus dulcis])

HSP 1 Score: 144 bits (362), Expect = 1.87e-40
Identity = 81/158 (51.27%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 14  LFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISP---PSSP--- 73
           LFV +L+ +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP  P   PSSP   
Sbjct: 11  LFVASLLFVPKMEAQRLFPPPRPLCASQFALANYACALLPFTPTPLPTPPSPPPSSPPDD 70

Query: 74  ---------HGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECV 133
                    H HGH H H H H H HGH+R  H GHH  S SP E+ CCRW  Q+D+ECV
Sbjct: 71  DGGQEQEHEHEHGHGHGHGHGHGHRHGHNRHRHGGHHEPSPSPAEDNCCRWLTQLDNECV 130

Query: 134 CDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           C+ L HL  F+++P+H +TVA+ E C VTY+C   I+I
Sbjct: 131 CELLVHLPTFLLKPTHAYTVAVGEFCRVTYTCGTPIRI 168

[Close]

BLAST of Csor.00g154650 vs. NCBI nr
Match: XP_020426347.1 (uncharacterized protein LOC18767864 [Prunus persica] >XP_034229905.1 uncharacterized protein LOC117638857 [Prunus dulcis])

HSP 1 Score: 144 bits (362), Expect = 5.52e-40
Identity = 81/158 (51.27%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 14  LFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISP---PSSP--- 73
           LFV +L+ +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP  P   PSSP   
Sbjct: 48  LFVASLLFVPKMEAQRLFPPPRPLCASQFALANYACALLPFTPTPLPTPPSPPPSSPPDD 107

Query: 74  ---------HGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECV 133
                    H HGH H H H H H HGH+R  H GHH  S SP E+ CCRW  Q+D+ECV
Sbjct: 108 DGGQEQEHEHEHGHGHGHGHGHGHRHGHNRHRHGGHHEPSPSPAEDNCCRWLTQLDNECV 167

Query: 134 CDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           C+ L HL  F+++P+H +TVA+ E C VTY+C   I+I
Sbjct: 168 CELLVHLPTFLLKPTHAYTVAVGEFCRVTYTCGTPIRI 205

[Close]

BLAST of Csor.00g154650 vs. ExPASy TrEMBL
Match: A0A6J1HVN1 (uncharacterized protein LOC111467082 OS=Cucurbita maxima OX=3661 GN=LOC111467082 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 2.15e-89
Identity = 135/155 (87.10%), Postives = 142/155 (91.61%), Query Frame = 0


Query: 1   MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI 60
           MGRLEFAY  AALLFVLALM P+I+AQAWSYPPKPLCSSQFALASYACARLPLN EPLPI
Sbjct: 1   MGRLEFAYASAALLFVLALMTPKIEAQAWSYPPKPLCSSQFALASYACARLPLNLEPLPI 60

Query: 61  SPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDA 120
           SPP SPH    +  H H H+HGHGHHRGHHHGHHHR+RSPIEEECCRWARQVD+ECVCDA
Sbjct: 61  SPPPSPHV---EEGHRHGHEHGHGHHRGHHHGHHHRNRSPIEEECCRWARQVDNECVCDA 120

Query: 121 LAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           LAHLANFMVRPSHVFTVAITEDC+VTYSCIGRIKI
Sbjct: 121 LAHLANFMVRPSHVFTVAITEDCIVTYSCIGRIKI 152

[Close]

BLAST of Csor.00g154650 vs. ExPASy TrEMBL
Match: A0A6J1DQT3 (uncharacterized protein LOC111022709 OS=Momordica charantia OX=3673 GN=LOC111022709 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 4.53e-65
Identity = 108/165 (65.45%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 1   MGRLEFAYTLAALLFVLALMIPEIDAQAWSYP-----PKPLCSSQFALASYACARLPLNP 60
           MGR + A+ LAAL  ++  +IP+++ QAWS P     P+PLCSSQFALASYACARLPLNP
Sbjct: 1   MGRFKIAHLLAALCVLV--LIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNP 60

Query: 61  EPLPISPPSSP-----HGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWAR 120
           EP+PI PP SP     HGHGH H H H    GHGH   HHH   H + SP+ EECCRWAR
Sbjct: 61  EPIPILPPPSPVDEDGHGHGHGHGHGH----GHGHQHQHHHRRRHHTHSPVAEECCRWAR 120

Query: 121 QVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           +VDSECVCDAL HLANF++RPSH FTVAIT+DC+VTYSC GRIKI
Sbjct: 121 EVDSECVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIKI 159

[Close]

BLAST of Csor.00g154650 vs. ExPASy TrEMBL
Match: A0A5E4EE79 (PREDICTED: histidine-rich OS=Prunus dulcis OX=3755 GN=ALMOND_2B027823 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 9.06e-41
Identity = 81/158 (51.27%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 14  LFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISP---PSSP--- 73
           LFV +L+ +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP  P   PSSP   
Sbjct: 11  LFVASLLFVPKMEAQRLFPPPRPLCASQFALANYACALLPFTPTPLPTPPSPPPSSPPDD 70

Query: 74  ---------HGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECV 133
                    H HGH H H H H H HGH+R  H GHH  S SP E+ CCRW  Q+D+ECV
Sbjct: 71  DGGQEQEHEHEHGHGHGHGHGHGHRHGHNRHRHGGHHEPSPSPAEDNCCRWLTQLDNECV 130

Query: 134 CDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           C+ L HL  F+++P+H +TVA+ E C VTY+C   I+I
Sbjct: 131 CELLVHLPTFLLKPTHAYTVAVGEFCRVTYTCGTPIRI 168

[Close]

BLAST of Csor.00g154650 vs. ExPASy TrEMBL
Match: A0A251N5W9 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G243700 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 9.06e-41
Identity = 81/158 (51.27%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 14  LFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISP---PSSP--- 73
           LFV +L+ +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP  P   PSSP   
Sbjct: 11  LFVASLLFVPKMEAQRLFPPPRPLCASQFALANYACALLPFTPTPLPTPPSPPPSSPPDD 70

Query: 74  ---------HGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECV 133
                    H HGH H H H H H HGH+R  H GHH  S SP E+ CCRW  Q+D+ECV
Sbjct: 71  DGGQEQEHEHEHGHGHGHGHGHGHRHGHNRHRHGGHHEPSPSPAEDNCCRWLTQLDNECV 130

Query: 134 CDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           C+ L HL  F+++P+H +TVA+ E C VTY+C   I+I
Sbjct: 131 CELLVHLPTFLLKPTHAYTVAVGEFCRVTYTCGTPIRI 168

[Close]

BLAST of Csor.00g154650 vs. ExPASy TrEMBL
Match: M5W0Q1 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021373mg PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 1.20e-40
Identity = 78/152 (51.32%), Postives = 98/152 (64.47%), Query Frame = 0


Query: 19  LMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISP---PSSP--------- 78
           L +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP  P   PSSP         
Sbjct: 3   LFVPKMEAQRLFPPPRPLCASQFALANYACALLPFTPTPLPTPPSPPPSSPPDDDGGQEQ 62

Query: 79  ---HGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAH 138
              H HGH H H H H H HGH+R  H GHH  S SP E+ CCRW  Q+D+ECVC+ L H
Sbjct: 63  EHEHEHGHGHGHGHGHGHRHGHNRHRHGGHHEPSPSPAEDNCCRWLTQLDNECVCELLVH 122

Query: 139 LANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155
           L  F+++P+H +TVA+ E C VTY+C   I+I
Sbjct: 123 LPTFLLKPTHAYTVAVGEFCRVTYTCGTPIRI 154

[Close]

BLAST of Csor.00g154650 vs. TAIR 10
Match: AT3G63095.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21
Identity = 70/221 (31.67%), Postives = 93/221 (42.08%), Query Frame = 0


Query: 32  PPKPLCSSQFALASYACARLPLN--PEPLPISPPSSP----------HGHGHDHDHNHDH 91
           PP+PLC+SQ+ALA+YAC+RLP++  P P PI+PP +P          H H HDHDH+HDH
Sbjct: 28  PPRPLCASQYALANYACSRLPMHTVPPPAPITPPPAPIAPPPPEHDHHDHDHDHDHDHDH 87

Query: 92  D----------------------------------------------------------- 151
           D                                                           
Sbjct: 88  DDDHDDDDDHDHDDDHDHDHDDDHDHDDDDRDRDRDRDRDRDRDRDHDRAHDDHDHNHDH 147

Query: 152 --------HGHGH------------------HRGHHHGHHHRSRSP--IEEECCRWARQV 154
                   H H H                  H  HHH HHHR R     ++ECC+W +Q+
Sbjct: 148 DNDHNDNNHDHNHDADHHNNDDNSHDQHRRRHHRHHHRHHHRHREETFAQQECCKWLKQM 207

The following BLAST results are available for this feature:

BLAST of Csor.00g154650 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g154650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571480.1	1.23e-107	100.00	hypothetical protein SDJN03_28208, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022967638.1	4.45e-89	87.10	uncharacterized protein LOC111467082 [Cucurbita maxima]	[more]
XP_022155619.1	9.35e-65	65.45	uncharacterized protein LOC111022709 [Momordica charantia]	[more]
ONH93644.1	1.87e-40	51.27	hypothetical protein PRUPE_8G243700 [Prunus persica] >VVA14005.1 PREDICTED: hist...	[more]
XP_020426347.1	5.52e-40	51.27	uncharacterized protein LOC18767864 [Prunus persica] >XP_034229905.1 uncharacter...	[more]

BLAST of Csor.00g154650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HVN1	2.15e-89	87.10	uncharacterized protein LOC111467082 OS=Cucurbita maxima OX=3661 GN=LOC111467082...	[more]
A0A6J1DQT3	4.53e-65	65.45	uncharacterized protein LOC111022709 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5E4EE79	9.06e-41	51.27	PREDICTED: histidine-rich OS=Prunus dulcis OX=3755 GN=ALMOND_2B027823 PE=4 SV=1	[more]
A0A251N5W9	9.06e-41	51.27	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G243700 PE=4 SV=1	[more]
M5W0Q1	1.20e-40	51.32	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021373m...	[more]

BLAST of Csor.00g154650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63095.1	1.2e-21	31.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 37..149 e-value: 0.0049 score: 26.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..81
None	No IPR available	PANTHER	PTHR34377:SF6	SUBFAMILY NOT NAMED	coord: 23..153
None	No IPR available	PANTHER	PTHR34377	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 23..153
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 93..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g154650.m01	Csor.00g154650.m01	mRNA