Csor.00g154580 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g154580
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionSignal recognition particle 9 kDa protein
LocationCsor_Chr19: 330765 .. 332806 (+)
RNA-Seq ExpressionCsor.00g154580
SyntenyCsor.00g154580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTACATAGCTTCCTGGGATGAATTTGTCGAGCGTTCTGTACAATTGTTCCGCTCCGATCCTAACTCCGTAAGTTTTTACTTCGAAATCCGATTCTGTAGATGTTGCTGTTGAGAAATCAACATCACAGATGAGAAATTAGATCGCATGATTGTATTGTGATTCTACAATTGCTTTTTTAACTCTTGAATTACATGAAATCGAGCTAGCCATCGCTGCAGACTTGAATGATTTGAATTGAGCATAATGAATTGTGAAGAGATTTCTAATTCATCTATTGCGAACTTACCGTCTACTCATACGATCCGTTTATTGCATCGTTTCTCGTTTTTTCGATTCCTTCTAACTGCGACCACCGTTTTCTTTTTCAATCCTACTGGAAATTTAGACGCGGTACAACGTAAAGTATCGACACTGCGATGGGAAACTGGTTCTTAAGGTCACCGATAACCGTGAGGTAAGGAATTGTTTGTTGAGATATTGATGAACATCATGTGTTTTTCTGGTCAGTGATCGGGGTGGGAATTTCGATTATTGACTGTCAACTATATGCTTGGCTCTGTGTTTCATGTGGCAAATTCTCAGCCTTATGAATATTAAACGGCAATGTTTGGAGAAGCGTGTTGAGTCTCTGATACACTTGTATCCAAGCAGACTTCTGATCAAGTTTTCGTTCAGTCTATGGCTCTCCACTTTATTCTTCTGTAAAGTGTCAAGTAGACAAGAGTTGAATCCAATACCGCAAACCAACAACTAGCAATTTAGAAATCAGGTCTTAAACCTAACCATTAATCCAAACTAAATCATTCATCGATTCATTTTGTTTCTTATTGTCAGATGCCACATCGGTTGGAGAGAGGATGAAACATTCTTTATAAGGGTGTGAAAACTTCTCCCTAACAGATGCATTTTAACAACCTTGAGGGAAAGCCCAAAGAGGACAGGCTTGGGTTTGGGCTGTTACACTTATACTGGCTGAAGTTATCTTTCATAATCATTTTACGGAAGATTAGAATGTGGGAGTGTTTGTTACCATGCTAGAAATGGTTTTCTTTTCCTTCTCACGTGGAAAAAATGAAAGCTAATTAGTGCAAGATGCATGGGTGCAAGTTATCAACTAAGAATCTGATTGGTGAAGTTCATACTTTGATGCTTGCTTGTATGGGGAATTTTCTGTATATATGCTTGTACCCTTGTGACAATCTGGACAAGTCAAATGATCTTCTATTGAAATGAACACTCTGGAAGATAACCAATTGGCATAACGGCACATGTCGAATCATAAAAATTTCAATATCAAGATGTTTTAGGTCTACTAATTTCCTCTTTTTTTTCCTTTTGTTTTCTCCCTGTTTTTCAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCCAAGAAGATGGAAAAACTCAACAACATATTCTTCACTCTGATGGCCCGGGGCCCCGAAGGTATTTTGCCTTTTAATTTATGTTGATTAATGAAGCATCAGAATACCCTGTTGAATAATAAATAACCGCTTGCTAGTGACATGATTTAGGACTAAAATTTTGTTAAGATTTGAATTCTTGTTGTCTATATAGTTTGAATGGAAACTATATATTCTTTAGTTTCATGAAAGTTTCAAATCCTCAAATTGCAGAAACTTGTAAATTAGCTCCATGATGATTTCAGTACTTGAGGATGAGTTCACTACTCCTCTGAATGCCGTTTGAGCCCATGATTGAGTGTAGACCTGCTTGCTAACTAATTTATATTGGCCAAAATGGTTCACGGCGAGACTGGAGTTTTCACACAATCTATGATCTATATGCAATCTTCGCATTCATAGACCATCTTTCTTAGTCTATATAATTTTCTTTTTATTTATCCATCAATGCTTCAACCTGTAAGTCTAATGTGCACTCAATTCTACTTTTTGGAATTCTCATATATTTTTTATTTTTCTCTTTTTTTCAGTGGATATATCAGAAGTGACGGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA

mRNA sequence

ATGGTCTACATAGCTTCCTGGGATGAATTTGTCGAGCGTTCTGTACAATTGTTCCGCTCCGATCCTAACTCCACGCGGTACAACGTAAAGTATCGACACTGCGATGGGAAACTGGTTCTTAAGGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCCAAGAAGATGGAAAAACTCAACAACATATTCTTCACTCTGATGGCCCGGGGCCCCGAAGTGGATATATCAGAAGTGACGGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA

Coding sequence (CDS)

ATGGTCTACATAGCTTCCTGGGATGAATTTGTCGAGCGTTCTGTACAATTGTTCCGCTCCGATCCTAACTCCACGCGGTACAACGTAAAGTATCGACACTGCGATGGGAAACTGGTTCTTAAGGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCCAAGAAGATGGAAAAACTCAACAACATATTCTTCACTCTGATGGCCCGGGGCCCCGAAGTGGATATATCAGAAGTGACGGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA

Protein sequence

MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ
Homology
[Close]
BLAST of Csor.00g154580 vs. ExPASy Swiss-Prot
Match: Q9SMU7 (Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP9 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-47
Identity = 89/103 (86.41%), Postives = 99/103 (96.12%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+ECLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 104
           KMEKLNNIFFTLMARGP+VD+SEVTGK+Q++ QP KKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. ExPASy Swiss-Prot
Match: O04438 (Signal recognition particle 9 kDa protein OS=Zea mays OX=4577 GN=SRP9 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.4e-44
Identity = 83/103 (80.58%), Postives = 94/103 (91.26%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVY+ SW+EFVERSVQLFR DPN+TRY +KYRHC+GKLVLKVTD+RECLKFKTDQAQDAK
Sbjct: 1   MVYVDSWEEFVERSVQLFRGDPNATRYVMKYRHCEGKLVLKVTDDRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 104
           KMEKLNNIFF LM RGP+VDISEV+GK+Q + Q  KKGRGR+Q
Sbjct: 61  KMEKLNNIFFALMTRGPDVDISEVSGKEQAEQQQAKKGRGRRQ 103

[Close]
BLAST of Csor.00g154580 vs. ExPASy Swiss-Prot
Match: Q55GL2 (Signal recognition particle 9 kDa protein OS=Dictyostelium discoideum OX=44689 GN=srp9 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.5e-16
Identity = 35/71 (49.30%), Postives = 56/71 (78.87%), Query Frame = 0 

Query: 2  VYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKK 61
          +YI  WDEF ++S QL+R+DP  TR++ K+RH +GK+VLKVT++   LKF+TD+  D K+
Sbjct: 1  MYIEDWDEFYDKSEQLYRTDPKRTRFSFKFRHVEGKVVLKVTNDTVNLKFQTDKENDFKR 60

Query: 62 MEKLNNIFFTL 73
          ++++N++FF L
Sbjct: 61 IDQINSLFFRL 71

[Close]
BLAST of Csor.00g154580 vs. ExPASy Swiss-Prot
Match: P21262 (Signal recognition particle 9 kDa protein OS=Canis lupus familiaris OX=9615 GN=SRP9 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 2.6e-12
Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 1  MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
          M    +W+EF   + +L+ +DP   R  +KYRH DG L +KVTD+  CL ++TDQAQD K
Sbjct: 1  MAQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGSLCIKVTDDLVCLVYRTDQAQDVK 60

Query: 61 KMEKLNNIFFTLM 74
          K+EK ++    LM
Sbjct: 61 KIEKFHSQLMRLM 73

[Close]
BLAST of Csor.00g154580 vs. ExPASy Swiss-Prot
Match: P49458 (Signal recognition particle 9 kDa protein OS=Homo sapiens OX=9606 GN=SRP9 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 2.6e-12
Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0 

Query: 6  SWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKL 65
          +W+EF   + +L+ +DP   R  +KYRH DG L +KVTD+  CL +KTDQAQD KK+EK 
Sbjct: 6  TWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKF 65

Query: 66 NNIFFTLM 74
          ++    LM
Sbjct: 66 HSQLMRLM 73

[Close]
BLAST of Csor.00g154580 vs. NCBI nr
Match: KAG6571487.1 (Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210 bits (535), Expect = 1.36e-68
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. NCBI nr
Match: XP_022963515.1 (signal recognition particle 9 kDa protein [Cucurbita moschata] >XP_022963516.1 signal recognition particle 9 kDa protein [Cucurbita moschata] >KAG7011249.1 Signal recognition particle 9 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209 bits (532), Expect = 3.90e-68
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. NCBI nr
Match: XP_038887366.1 (signal recognition particle 9 kDa protein [Benincasa hispida] >XP_038887367.1 signal recognition particle 9 kDa protein [Benincasa hispida])

HSP 1 Score: 207 bits (528), Expect = 1.59e-67
Identity = 100/103 (97.09%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVY+ASWDEFVERSVQLFRSDPNSTRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYVASWDEFVERSVQLFRSDPNSTRYNMKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. NCBI nr
Match: XP_022967500.1 (signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967501.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967502.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967503.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima])

HSP 1 Score: 207 bits (527), Expect = 2.26e-67
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKL+NIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLDNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. NCBI nr
Match: XP_004154105.1 (signal recognition particle 9 kDa protein [Cucumis sativus] >XP_004154106.1 signal recognition particle 9 kDa protein [Cucumis sativus] >XP_008449345.1 PREDICTED: signal recognition particle 9 kDa protein [Cucumis melo] >XP_008449346.1 PREDICTED: signal recognition particle 9 kDa protein [Cucumis melo] >XP_031736389.1 signal recognition particle 9 kDa protein [Cucumis sativus] >KAA0057425.1 signal recognition particle 9 kDa protein [Cucumis melo var. makuwa] >KGN61688.1 hypothetical protein Csa_006515 [Cucumis sativus] >TYK30124.1 signal recognition particle 9 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (525), Expect = 4.56e-67
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. ExPASy TrEMBL
Match: A0A6J1HI87 (Signal recognition particle 9 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111463821 PE=3 SV=1)

HSP 1 Score: 209 bits (532), Expect = 1.89e-68
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. ExPASy TrEMBL
Match: A0A6J1HSA1 (Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111466989 PE=3 SV=1)

HSP 1 Score: 207 bits (527), Expect = 1.09e-67
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKL+NIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLDNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. ExPASy TrEMBL
Match: A0A1S3BLU0 (Signal recognition particle 9 kDa protein OS=Cucumis melo OX=3656 GN=LOC103491251 PE=3 SV=1)

HSP 1 Score: 206 bits (525), Expect = 2.21e-67
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. ExPASy TrEMBL
Match: A0A5D3E2L2 (Signal recognition particle 9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001060 PE=3 SV=1)

HSP 1 Score: 206 bits (525), Expect = 2.21e-67
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. ExPASy TrEMBL
Match: A0A0A0LIQ2 (Signal recognition particle 9 kDa protein OS=Cucumis sativus OX=3659 GN=Csa_2G224280 PE=3 SV=1)

HSP 1 Score: 206 bits (525), Expect = 2.21e-67
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFVERSVQLFRSDP STRYN+KYRHCDGKLVLKVTDNRECLKFKTDQAQDAK
Sbjct: 1   MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 103
           KMEKLNNIFFTLMARGP+VDISEVTGKDQVDAQPTKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103

[Close]
BLAST of Csor.00g154580 vs. TAIR 10
Match: AT3G49100.1 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-48
Identity = 89/103 (86.41%), Postives = 99/103 (96.12%), Query Frame = 0 

Query: 1   MVYIASWDEFVERSVQLFRSDPNSTRYNVKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60
           MVYIASWDEFV+RSVQLFR+DP STRY +KYRHCDGKLVLKVTDN+ECLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 61  KMEKLNNIFFTLMARGPEVDISEVTGKDQVDAQPTKKGRGRKQ 104
           KMEKLNNIFFTLMARGP+VD+SEVTGK+Q++ QP KKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103

The following BLAST results are available for this feature:
BLAST of Csor.00g154580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SMU71.4e-4786.41Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP... [more]
O044387.4e-4480.58Signal recognition particle 9 kDa protein OS=Zea mays OX=4577 GN=SRP9 PE=3 SV=1[more]
Q55GL26.5e-1649.30Signal recognition particle 9 kDa protein OS=Dictyostelium discoideum OX=44689 G... [more]
P212622.6e-1245.21Signal recognition particle 9 kDa protein OS=Canis lupus familiaris OX=9615 GN=S... [more]
P494582.6e-1248.53Signal recognition particle 9 kDa protein OS=Homo sapiens OX=9606 GN=SRP9 PE=1 S... [more]
BLAST of Csor.00g154580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6571487.11.36e-68100.00Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp... [more]
XP_022963515.13.90e-6899.03signal recognition particle 9 kDa protein [Cucurbita moschata] >XP_022963516.1 s... [more]
XP_038887366.11.59e-6797.09signal recognition particle 9 kDa protein [Benincasa hispida] >XP_038887367.1 si... [more]
XP_022967500.12.26e-6798.06signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967501.... [more]
XP_004154105.14.56e-6797.09signal recognition particle 9 kDa protein [Cucumis sativus] >XP_004154106.1 sign... [more]
BLAST of Csor.00g154580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HI871.89e-6899.03Signal recognition particle 9 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1HSA11.09e-6798.06Signal recognition particle 9 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A1S3BLU02.21e-6797.09Signal recognition particle 9 kDa protein OS=Cucumis melo OX=3656 GN=LOC10349125... [more]
A0A5D3E2L22.21e-6797.09Signal recognition particle 9 kDa protein OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A0A0LIQ22.21e-6797.09Signal recognition particle 9 kDa protein OS=Cucumis sativus OX=3659 GN=Csa_2G22... [more]
BLAST of Csor.00g154580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G49100.11.0e-4886.41Signal recognition particle, SRP9/SRP14 subunit [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008832Signal recognition particle, SRP9 subunitPIRSFPIRSF017029SRP9coord: 1..97
e-value: 6.0E-39
score: 129.9
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10Signal recognition particle alu RNA binding heterodimer, srp9/1coord: 2..83
e-value: 3.0E-35
score: 121.9
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILY54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 5..79
IPR039432SRP9 domainPFAMPF05486SRP9-21coord: 5..66
e-value: 2.4E-10
score: 40.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..97
NoneNo IPR availablePANTHERPTHR12834:SF13SIGNAL RECOGNITION PARTICLE 9 KDA PROTEINcoord: 1..103
IPR039914Signal recognition particle SRP9PANTHERPTHR12834SIGNAL RECOGNITION PARTICLE 9 KDA PROTEINcoord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g154580.m01Csor.00g154580.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045900 negative regulation of translational elongation
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0048500 signal recognition particle
molecular_function GO:0008312 7S RNA binding