Csor.00g154490 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g154490
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr19: 424589 .. 425409 (-)
RNA-Seq Expression	Csor.00g154490
Synteny	Csor.00g154490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGGAAGGAAATTCAGGTATGCCCATGTAACGACCCAGGTCTATCGCTAGCGGATATTGTCTTCTTTGGGTTTTTCTTTTCAGGCTTCTCCTCAATGCTTTAAAACGCGTCTGCACTAGGGAAAGGTTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATCCACCACCTTCGGGACCCAGCATCTTCGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACCACCCCCAAATCCACCCCGCTTTAGGGCCAGCGTCTTTATTGGCACACCACTTCGTGTCTACCCCCTTTGGGGAACAGCGAGAAGGCTGGCACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAATGACCCAGGCCCACCGCTAGCATATATTGTTCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGTTAGGGAAAAGTTTTTAAATGCCTCATTTGCTTAGGAAAGAGGTCTTGGCCTGAGCTGGTGGGCGAAGATGGGAATAAGGCTAAGTTTTTAAATGCCTCATTTGCTTAGGAAAGAGGTCTTGGCCTGAGCTGGTGGGCGAAGATGGGAATAAGGCTGTAAAGATCATAGAGGAAGAGAATCCGAATGTGGTCGTAGTCTTACAAGCTGGGCCAGAGATCATATCCAAACCATTATATGGTCCCGATGGCAGTATCATAGGCTACCAAGCAGTCTCAGGCCGCCCGCCATACGCAGTTCCTCCCGGCCTCGCTGTTGTTGAAGTCGTTCTTGACGTCGAGGGGAAGGTCGAAAAGGTTCCCGTCTTTAGAACATCCTAA

mRNA sequence

ATGTCTGAGGAAGGAAATTCAGGAAAGAGGTCTTGGCCTGAGCTGGTGGGCGAAGATGGGAATAAGGCTGTAAAGATCATAGAGGAAGAGAATCCGAATGTGGTCGTAGTCTTACAAGCTGGGCCAGAGATCATATCCAAACCATTATATGGTCCCGATGGCAGTATCATAGGCTACCAAGCAGTCTCAGGCCGCCCGCCATACGCAGTTCCTCCCGGCCTCGCTGTTGTTGAAGTCGTTCTTGACGTCGAGGGGAAGGTCGAAAAGGTTCCCGTCTTTAGAACATCCTAA

Coding sequence (CDS)

ATGTCTGAGGAAGGAAATTCAGGAAAGAGGTCTTGGCCTGAGCTGGTGGGCGAAGATGGGAATAAGGCTGTAAAGATCATAGAGGAAGAGAATCCGAATGTGGTCGTAGTCTTACAAGCTGGGCCAGAGATCATATCCAAACCATTATATGGTCCCGATGGCAGTATCATAGGCTACCAAGCAGTCTCAGGCCGCCCGCCATACGCAGTTCCTCCCGGCCTCGCTGTTGTTGAAGTCGTTCTTGACGTCGAGGGGAAGGTCGAAAAGGTTCCCGTCTTTAGAACATCCTAA

Protein sequence

MSEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQAVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVFRTS

Homology

[Close]

BLAST of Csor.00g154490 vs. NCBI nr
Match: KAG6571496.1 (hypothetical protein SDJN03_28224, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190 bits (482), Expect = 9.95e-61
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60
          MSEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ
Sbjct: 1  MSEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60

Query: 61 AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVFRTS 96
          AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVFRTS
Sbjct: 61 AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVFRTS 96

[Close]

BLAST of Csor.00g154490 vs. NCBI nr
Match: XP_022963565.1 (uncharacterized protein LOC111463861 [Cucurbita moschata])

HSP 1 Score: 183 bits (465), Expect = 3.91e-58
Identity = 93/96 (96.88%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MSEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60
          M EEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ
Sbjct: 1  MCEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60

Query: 61 AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVFRTS 96
          AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPV  TS
Sbjct: 61 AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVISTS 96

[Close]

BLAST of Csor.00g154490 vs. NCBI nr
Match: KAG6571495.1 (hypothetical protein SDJN03_28223, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181 bits (460), Expect = 2.26e-57
Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MSEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60
          MSE+GNSGKRSWPELVGEDG KAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ
Sbjct: 1  MSEDGNSGKRSWPELVGEDGKKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60

Query: 61 AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVFRTS 96
          AVSGRPPYAVPP LAVVEVVLDVEGKVEKVPV RTS
Sbjct: 61 AVSGRPPYAVPPDLAVVEVVLDVEGKVEKVPVIRTS 96

[Close]

BLAST of Csor.00g154490 vs. NCBI nr
Match: XP_023554324.1 (uncharacterized protein LOC111811619 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181 bits (459), Expect = 3.22e-57
Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MSEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60
          MSE+GNS KR WPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ
Sbjct: 1  MSEDGNSEKRFWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60

Query: 61 AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVFRTS 96
          AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPV RTS
Sbjct: 61 AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVIRTS 96

[Close]

BLAST of Csor.00g154490 vs. NCBI nr
Match: XP_023554325.1 (uncharacterized protein LOC111811619 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169 bits (428), Expect = 1.48e-52
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 9  KRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQAVSGRPPY 68
          +R WPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQAVSGRPPY
Sbjct: 4  QRFWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQAVSGRPPY 63

Query: 69 AVPPGLAVVEVVLDVEGKVEKVPVFRTS 96
          AVPPGLAVVEVVLDVEGKVEKVPV RTS
Sbjct: 64 AVPPGLAVVEVVLDVEGKVEKVPVIRTS 91

[Close]

BLAST of Csor.00g154490 vs. ExPASy TrEMBL
Match: A0A6J1HIC7 (uncharacterized protein LOC111463861 OS=Cucurbita moschata OX=3662 GN=LOC111463861 PE=3 SV=1)

HSP 1 Score: 183 bits (465), Expect = 1.89e-58
Identity = 93/96 (96.88%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MSEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60
          M EEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ
Sbjct: 1  MCEEGNSGKRSWPELVGEDGNKAVKIIEEENPNVVVVLQAGPEIISKPLYGPDGSIIGYQ 60

Query: 61 AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVFRTS 96
          AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPV  TS
Sbjct: 61 AVSGRPPYAVPPGLAVVEVVLDVEGKVEKVPVISTS 96

[Close]

BLAST of Csor.00g154490 vs. ExPASy TrEMBL
Match: Q43420 (Pumpkin Fruit Chymotrypsin Inhibitor OS=Cucurbita maxima OX=3661 GN=pfiBM7 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.11e-05
Identity = 21/30 (70.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 9  KRSWPELVGEDGNKAVKIIEEENPNVVVVL 38
          K SWPELVGEDG +AVKII++ENP++ V+L
Sbjct: 4  KSSWPELVGEDGEEAVKIIQQENPSLDVIL 33

[Close]

BLAST of Csor.00g154490 vs. ExPASy TrEMBL
Match: A0A1J6IR79 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_24925 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.07e-05
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 8  GKRSWPELVGEDGNKAVKIIEEENPNV-VVVLQAGPEI 44
          GK SWPEL+G D NKAV II++ENPN+ VV+L+ G  I
Sbjct: 15 GKSSWPELIGADVNKAVNIIKKENPNLHVVLLKMGQSI 52

[Close]

BLAST of Csor.00g154490 vs. ExPASy TrEMBL
Match: Q6DKU8 (Putative chymotrypsin protease inhibitor OS=Cucurbita maxima OX=3661 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 4.45e-05
Identity = 20/30 (66.67%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 9  KRSWPELVGEDGNKAVKIIEEENPNVVVVL 38
          K SWPELVG+DG +AVKII++ENP++ V+L
Sbjct: 4  KSSWPELVGKDGEEAVKIIQQENPSLDVIL 33

[Close]

BLAST of Csor.00g154490 vs. ExPASy TrEMBL
Match: Q43421 (Pumpkin fruit trypsin inhibitor OS=Cucurbita maxima OX=3661 GN=pfiAF4 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 6.30e-05
Identity = 20/30 (66.67%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 9  KRSWPELVGEDGNKAVKIIEEENPNVVVVL 38
          K SWPELVG+DG +AVKII++ENP++ V+L
Sbjct: 4  KLSWPELVGKDGEEAVKIIQQENPSLDVIL 33

The following BLAST results are available for this feature:

BLAST of Csor.00g154490 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g154490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571496.1	9.95e-61	100.00	hypothetical protein SDJN03_28224, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022963565.1	3.91e-58	96.88	uncharacterized protein LOC111463861 [Cucurbita moschata]	[more]
KAG6571495.1	2.26e-57	95.83	hypothetical protein SDJN03_28223, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023554324.1	3.22e-57	95.83	uncharacterized protein LOC111811619 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023554325.1	1.48e-52	96.59	uncharacterized protein LOC111811619 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g154490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIC7	1.89e-58	96.88	uncharacterized protein LOC111463861 OS=Cucurbita moschata OX=3662 GN=LOC1114638...	[more]
Q43420	1.11e-05	70.00	Pumpkin Fruit Chymotrypsin Inhibitor OS=Cucurbita maxima OX=3661 GN=pfiBM7 PE=2 ...	[more]
A0A1J6IR79	2.07e-05	63.16	Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_24925 PE=3 SV=1	[more]
Q6DKU8	4.45e-05	66.67	Putative chymotrypsin protease inhibitor OS=Cucurbita maxima OX=3661 PE=3 SV=1	[more]
Q43421	6.30e-05	66.67	Pumpkin fruit trypsin inhibitor OS=Cucurbita maxima OX=3661 GN=pfiAF4 PE=2 SV=1	[more]

BLAST of Csor.00g154490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.10.10	Trypsin Inhibitor V, subunit A	coord: 4..42 e-value: 1.7E-13 score: 52.2
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PFAM	PF00280	potato_inhibit	coord: 9..41 e-value: 2.1E-9 score: 37.9
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PROSITE	PS00285	POTATO_INHIBITOR	coord: 12..23
IPR036354	Proteinase inhibitor I13, potato inhibitor I superfamily	SUPERFAMILY	54654	CI-2 family of serine protease inhibitors	coord: 6..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g154490.m01	Csor.00g154490.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0009611	response to wounding
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity