Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACCCATACTAGAATTTAGAACACCACAACACCCTTCTCTTGCCAAGAACAATTGGGGTGGAGCTTCTCCTTTGCTAGCTAGAAACATACCCCATGACACTCTTGAACTTAGGTATCTCAAGCTCAACTCCGCTCGTACTCGAGACGAAATCTTTCCTCTTCTAGAAGACGATCAGCATAGCTATTACTTGCCCGTCTCGTACGCGCCTCGACTACAGCGTCTCGAGAAGTCGAGGTATGTGAAAGGGAGTTCGTTTTTGTCGAAGTTGTCTTTACCGTGGAGAGGGAAGAGGAAGACATTGTTCGGATTGAACTCGAGGAAGAAATGGTTTAAGGGATGGGATTATCAAAACCGATGGCCTCAAGGATGGTGCTAA
mRNA sequence
ATGAGACCCATACTAGAATTTAGAACACCACAACACCCTTCTCTTGCCAAGAACAATTGGGGTGGAGCTTCTCCTTTGCTAGCTAGAAACATACCCCATGACACTCTTGAACTTAGGTATCTCAAGCTCAACTCCGCTCGTACTCGAGACGAAATCTTTCCTCTTCTAGAAGACGATCAGCATAGCTATTACTTGCCCGTCTCGTACGCGCCTCGACTACAGCGTCTCGAGAAGTCGAGGTATGTGAAAGGGAGTTCGTTTTTGTCGAAGTTGTCTTTACCGTGGAGAGGGAAGAGGAAGACATTGTTCGGATTGAACTCGAGGAAGAAATGGTTTAAGGGATGGGATTATCAAAACCGATGGCCTCAAGGATGGTGCTAA
Coding sequence (CDS)
ATGAGACCCATACTAGAATTTAGAACACCACAACACCCTTCTCTTGCCAAGAACAATTGGGGTGGAGCTTCTCCTTTGCTAGCTAGAAACATACCCCATGACACTCTTGAACTTAGGTATCTCAAGCTCAACTCCGCTCGTACTCGAGACGAAATCTTTCCTCTTCTAGAAGACGATCAGCATAGCTATTACTTGCCCGTCTCGTACGCGCCTCGACTACAGCGTCTCGAGAAGTCGAGGTATGTGAAAGGGAGTTCGTTTTTGTCGAAGTTGTCTTTACCGTGGAGAGGGAAGAGGAAGACATTGTTCGGATTGAACTCGAGGAAGAAATGGTTTAAGGGATGGGATTATCAAAACCGATGGCCTCAAGGATGGTGCTAA
Protein sequence
MRPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQHSYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNRWPQGWC
Homology
BLAST of Csor.00g154310 vs. NCBI nr
Match:
KAG6571514.1 (hypothetical protein SDJN03_28242, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 270 bits (691), Expect = 1.18e-91
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 1 MRPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQ 60
MRPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQ
Sbjct: 1 MRPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQ 60
Query: 61 HSYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNR 120
HSYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNR
Sbjct: 61 HSYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNR 120
Query: 121 WPQGWC 126
WPQGWC
Sbjct: 121 WPQGWC 126
BLAST of Csor.00g154310 vs. NCBI nr
Match:
TYK20514.1 (hypothetical protein E5676_scaffold237G00890 [Cucumis melo var. makuwa])
HSP 1 Score: 219 bits (557), Expect = 8.09e-70
Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 0
Query: 6 EFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQH---- 65
EFRTPQHPSL KNNWGGASPLLARNIPH+T+ELRYLKLN++RTRDEIFPL ED+
Sbjct: 99 EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNTSRTRDEIFPLQEDEDDDEVS 158
Query: 66 -SYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNR 125
+YYLPVSY PRLQRLEK++YVK +SFLSKLSLPW+GKR+TL G NSRKKWFK WDYQNR
Sbjct: 159 DNYYLPVSYTPRLQRLEKTKYVKKNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQNR 218
BLAST of Csor.00g154310 vs. NCBI nr
Match:
KGN57931.1 (hypothetical protein Csa_009875 [Cucumis sativus])
HSP 1 Score: 209 bits (532), Expect = 2.25e-67
Identity = 97/128 (75.78%), Postives = 112/128 (87.50%), Query Frame = 0
Query: 1 MRPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDD- 60
MR I+EFRTPQHPS KNNWGGASPLLARNIPH+TLELRYLKLN+ RTRDEIFPL ED+
Sbjct: 1 MRHIVEFRTPQHPSFGKNNWGGASPLLARNIPHETLELRYLKLNTTRTRDEIFPLQEDEV 60
Query: 61 QHSYYLPVSYAPRLQR-LEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQ 120
+YYLP+SY +LQ+ +K++YV+ +SFLSKLSLPW+GKR+TL G NSRKKWFK WDYQ
Sbjct: 61 DDNYYLPISYTTQLQQHFKKTKYVERNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQ 120
Query: 121 NRWPQGWC 126
NRWPQGWC
Sbjct: 121 NRWPQGWC 128
BLAST of Csor.00g154310 vs. NCBI nr
Match:
TYI75034.1 (hypothetical protein E1A91_D07G246700v1 [Gossypium mustelinum])
HSP 1 Score: 137 bits (346), Expect = 4.20e-39
Identity = 71/125 (56.80%), Postives = 85/125 (68.00%), Query Frame = 0
Query: 2 RPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQH 61
R +LEFRTPQHPSL NNWGGASPLLAR+IP ++LE RYL+LNS R RDEIFP + D
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSMRNRDEIFPA-KADHF 63
Query: 62 SYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNRW 121
+ P A Q SR +G FLSKL PW+ + TL +SR++WF WD +NRW
Sbjct: 64 NCNTPTQAAKHGQAPTPSR--RGRGFLSKLMFPWK-ETATLGANSSRRRWFPRWDPKNRW 123
Query: 122 PQGWC 126
PQGWC
Sbjct: 124 PQGWC 124
BLAST of Csor.00g154310 vs. NCBI nr
Match:
MBA0822438.1 (hypothetical protein [Gossypium armourianum])
HSP 1 Score: 137 bits (345), Expect = 5.97e-39
Identity = 71/125 (56.80%), Postives = 84/125 (67.20%), Query Frame = 0
Query: 2 RPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQH 61
R +LEFRTPQHPSL NNWGGASPLLAR+IP ++LE RYL+LNS R RDEIFP D
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSIRNRDEIFPA-NADHF 63
Query: 62 SYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNRW 121
+ P A Q SR +G FLSKL PW+ + TL +SR++WF WD +NRW
Sbjct: 64 NCNTPTQAAKHGQAPTPSR--RGRGFLSKLMFPWK-ETATLGANSSRRRWFPRWDPKNRW 123
Query: 122 PQGWC 126
PQGWC
Sbjct: 124 PQGWC 124
BLAST of Csor.00g154310 vs. ExPASy TrEMBL
Match:
A0A5D3DAH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00890 PE=4 SV=1)
HSP 1 Score: 219 bits (557), Expect = 3.92e-70
Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 0
Query: 6 EFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQH---- 65
EFRTPQHPSL KNNWGGASPLLARNIPH+T+ELRYLKLN++RTRDEIFPL ED+
Sbjct: 99 EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNTSRTRDEIFPLQEDEDDDEVS 158
Query: 66 -SYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNR 125
+YYLPVSY PRLQRLEK++YVK +SFLSKLSLPW+GKR+TL G NSRKKWFK WDYQNR
Sbjct: 159 DNYYLPVSYTPRLQRLEKTKYVKKNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQNR 218
BLAST of Csor.00g154310 vs. ExPASy TrEMBL
Match:
A0A0A0LCZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G395420 PE=4 SV=1)
HSP 1 Score: 209 bits (532), Expect = 1.09e-67
Identity = 97/128 (75.78%), Postives = 112/128 (87.50%), Query Frame = 0
Query: 1 MRPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDD- 60
MR I+EFRTPQHPS KNNWGGASPLLARNIPH+TLELRYLKLN+ RTRDEIFPL ED+
Sbjct: 1 MRHIVEFRTPQHPSFGKNNWGGASPLLARNIPHETLELRYLKLNTTRTRDEIFPLQEDEV 60
Query: 61 QHSYYLPVSYAPRLQR-LEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQ 120
+YYLP+SY +LQ+ +K++YV+ +SFLSKLSLPW+GKR+TL G NSRKKWFK WDYQ
Sbjct: 61 DDNYYLPISYTTQLQQHFKKTKYVERNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQ 120
Query: 121 NRWPQGWC 126
NRWPQGWC
Sbjct: 121 NRWPQGWC 128
BLAST of Csor.00g154310 vs. ExPASy TrEMBL
Match:
A0A5D2UEN6 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D07G246700v1 PE=4 SV=1)
HSP 1 Score: 137 bits (346), Expect = 2.04e-39
Identity = 71/125 (56.80%), Postives = 85/125 (68.00%), Query Frame = 0
Query: 2 RPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQH 61
R +LEFRTPQHPSL NNWGGASPLLAR+IP ++LE RYL+LNS R RDEIFP + D
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSMRNRDEIFPA-KADHF 63
Query: 62 SYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNRW 121
+ P A Q SR +G FLSKL PW+ + TL +SR++WF WD +NRW
Sbjct: 64 NCNTPTQAAKHGQAPTPSR--RGRGFLSKLMFPWK-ETATLGANSSRRRWFPRWDPKNRW 123
Query: 122 PQGWC 126
PQGWC
Sbjct: 124 PQGWC 124
BLAST of Csor.00g154310 vs. ExPASy TrEMBL
Match:
A0A7J9IKX3 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_019241 PE=4 SV=1)
HSP 1 Score: 137 bits (345), Expect = 2.89e-39
Identity = 71/125 (56.80%), Postives = 84/125 (67.20%), Query Frame = 0
Query: 2 RPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQH 61
R +LEFRTPQHPSL NNWGGASPLLAR+IP ++LE RYL+LNS R RDEIFP D
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSIRNRDEIFPA-NADHF 63
Query: 62 SYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDYQNRW 121
+ P A Q SR +G FLSKL PW+ + TL +SR++WF WD +NRW
Sbjct: 64 NCNTPTQAAKHGQAPTPSR--RGRGFLSKLMFPWK-ETATLGANSSRRRWFPRWDPKNRW 123
Query: 122 PQGWC 126
PQGWC
Sbjct: 124 PQGWC 124
BLAST of Csor.00g154310 vs. ExPASy TrEMBL
Match:
B9T2A4 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0463590 PE=4 SV=1)
HSP 1 Score: 135 bits (340), Expect = 1.66e-38
Identity = 68/126 (53.97%), Postives = 85/126 (67.46%), Query Frame = 0
Query: 2 RPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQH 61
R +LEFRTPQHPSL NNWGGASP+LARN+P ++LE RY +LN+ RTRDEIFP+ EDD++
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGASPMLARNVPKESLEQRYSRLNTVRTRDEIFPVAEDDEY 63
Query: 62 SYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKK-WFKGWDYQNR 121
+ YA + + G FLS L P K+K GL ++KK WF WD +NR
Sbjct: 64 FKFFNQFYA---SKGDVPSMRGGKGFLSWLKYP--RKQKVTLGLKTQKKTWFPRWDPKNR 123
Query: 122 WPQGWC 126
WPQGWC
Sbjct: 124 WPQGWC 124
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6571514.1 | 1.18e-91 | 100.00 | hypothetical protein SDJN03_28242, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| TYK20514.1 | 8.09e-70 | 80.16 | hypothetical protein E5676_scaffold237G00890 [Cucumis melo var. makuwa] | [more] |
| KGN57931.1 | 2.25e-67 | 75.78 | hypothetical protein Csa_009875 [Cucumis sativus] | [more] |
| TYI75034.1 | 4.20e-39 | 56.80 | hypothetical protein E1A91_D07G246700v1 [Gossypium mustelinum] | [more] |
| MBA0822438.1 | 5.97e-39 | 56.80 | hypothetical protein [Gossypium armourianum] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DAH9 | 3.92e-70 | 80.16 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0LCZ1 | 1.09e-67 | 75.78 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G395420 PE=4 SV=1 | [more] |
| A0A5D2UEN6 | 2.04e-39 | 56.80 | Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D07G246700v1 P... | [more] |
| A0A7J9IKX3 | 2.89e-39 | 56.80 | Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_019241 PE=4 S... | [more] |
| B9T2A4 | 1.66e-38 | 53.97 | Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0463590 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
