Csor.00g153750 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGATTACGCACCCTCCGAGTCGCCATCCCCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCGCTCTTTGCAGCTACCCACCACCAAACGCATCATCCAGGGCTATACCCACATCCAATCTACATTGCTGCTAGTGCTCCTAATCTTCATTGTTTCCCCAATAATCCACCTTTGTTCTATGAACACATGGGGTACTATGGTGGCCTTTGTTCAACCAATAGATATCATCATCATCATCATCAATATGGGGTGGAAGATGAACAAAAGGTGTTGAATTGGCAGAGAAACATTCAGAATGATAACAAAAAAGAACAAAAACTTGATCTTTCCCTTCATTTATAG ATGTCCGATTACGCACCCTCCGAGTCGCCATCCCCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCGCTCTTTGCAGCTACCCACCACCAAACGCATCATCCAGGGCTATACCCACATCCAATCTACATTGCTGCTAGTGCTCCTAATCTTCATTGTTTCCCCAATAATCCACCTTTGTTCTATGAACACATGGGGTACTATGGTGGCCTTTGTTCAACCAATAGATATCATCATCATCATCATCAATATGGGGTGGAAGATGAACAAAAGGTGTTGAATTGGCAGAGAAACATTCAGAATGATAACAAAAAAGAACAAAAACTTGATCTTTCCCTTCATTTATAG ATGTCCGATTACGCACCCTCCGAGTCGCCATCCCCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCGCTCTTTGCAGCTACCCACCACCAAACGCATCATCCAGGGCTATACCCACATCCAATCTACATTGCTGCTAGTGCTCCTAATCTTCATTGTTTCCCCAATAATCCACCTTTGTTCTATGAACACATGGGGTACTATGGTGGCCTTTGTTCAACCAATAGATATCATCATCATCATCATCAATATGGGGTGGAAGATGAACAAAAGGTGTTGAATTGGCAGAGAAACATTCAGAATGATAACAAAAAAGAACAAAAACTTGATCTTTCCCTTCATTTATAG MSDYAPSESPSPSSPSSSSSSSLFAATHHQTHHPGLYPHPIYIAASAPNLHCFPNNPPLFYEHMGYYGGLCSTNRYHHHHHQYGVEDEQKVLNWQRNIQNDNKKEQKLDLSLHL Homology
BLAST of Csor.00g153750 vs. NCBI nr
Match: KAG6571570.1 (hypothetical protein SDJN03_28298, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 232 bits (592), Expect = 6.15e-77 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Csor.00g153750 vs. NCBI nr
Match: XP_022967643.1 (protein LATE FLOWERING-like [Cucurbita maxima]) HSP 1 Score: 190 bits (482), Expect = 1.91e-59 Identity = 98/114 (85.96%), Postives = 105/114 (92.11%), Query Frame = 0
BLAST of Csor.00g153750 vs. NCBI nr
Match: XP_023511523.1 (protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184 bits (466), Expect = 5.04e-57 Identity = 95/114 (83.33%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of Csor.00g153750 vs. NCBI nr
Match: KAG7011312.1 (hypothetical protein SDJN02_26216, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 156 bits (395), Expect = 5.41e-47 Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0
BLAST of Csor.00g153750 vs. NCBI nr
Match: KAA0066236.1 (protein LATE FLOWERING-like [Cucumis melo var. makuwa]) HSP 1 Score: 108 bits (269), Expect = 2.92e-27 Identity = 60/111 (54.05%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of Csor.00g153750 vs. ExPASy TrEMBL
Match: A0A6J1HVN7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111467088 PE=4 SV=1) HSP 1 Score: 190 bits (482), Expect = 9.25e-60 Identity = 98/114 (85.96%), Postives = 105/114 (92.11%), Query Frame = 0
BLAST of Csor.00g153750 vs. ExPASy TrEMBL
Match: A0A5A7VIQ7 (Protein LATE FLOWERING-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002620 PE=4 SV=1) HSP 1 Score: 108 bits (269), Expect = 1.41e-27 Identity = 60/111 (54.05%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of Csor.00g153750 vs. ExPASy TrEMBL
Match: A0A1S3BIU8 (protein LATE FLOWERING-like OS=Cucumis melo OX=3656 GN=LOC103490048 PE=4 SV=1) HSP 1 Score: 108 bits (269), Expect = 2.85e-27 Identity = 60/111 (54.05%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of Csor.00g153750 vs. ExPASy TrEMBL
Match: A0A6J1ETH7 (protein LATE FLOWERING OS=Cucurbita moschata OX=3662 GN=LOC111437406 PE=4 SV=1) HSP 1 Score: 106 bits (264), Expect = 1.38e-26 Identity = 64/114 (56.14%), Postives = 75/114 (65.79%), Query Frame = 0
BLAST of Csor.00g153750 vs. ExPASy TrEMBL
Match: A0A0A0LE19 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G624040 PE=4 SV=1) HSP 1 Score: 105 bits (262), Expect = 1.57e-26 Identity = 59/111 (53.15%), Postives = 75/111 (67.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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