Csor.00g153620 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTTTGTGTTTGCAACCTCACAATGCAAGGAGTCTCACAGAGTTGTATTGAATCTATACGACCTCAGCCGCGGATCGGCTCGACAGTTCTTGACAACATTGTTAGGGAAACCCATTAAAGGCATATGGTAAGTGCTGAACTTTGCTAAGATATTATGTTGCTTGGTACCCAATTAAAAGAGTAGTATATGGATAAACTGAGACTACATCGAATTGAAAGCGTTTTTAAAGATATGAAATTATGGTTAAGAAATGTGTAAAAGTATTGATAGTTACTGTAACGGCTCAAGCCCACCACTAGTAGATATTGTCCTCTTTGGGCTTTTCCTTTCGAGCTTCCCTTTAAGGTCCACCACTAGTAGATATTGTCCTCTTTGGGCTTTTCCTTTCGAGCTTCCCTTCAAGGTTTTTAAAACGCGACTACTAGGGAGAGATTTCCACACCCTTATAAAGAATGCTTCATTCTCCTCAACCAATATCGGATCTCATAGTTACTACTCATACTAACAAGTTGTACCATTCTTTTTTAGGTAGTTCAATCATATGAACTCTAAAGTTGAGTATGTTTAACTTGGAGGTATGTAGGATGTAATAGTCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTCGGTTTTCCCTTTCGGACTTTCCTTCAAAGTTTTTAAAACATGTCTATTAAGGAAAGGTTTCCACACCCTTATAAAGAATATTTCGTTCCCCTCTCCAACCAATGTGGGATCTCACATAGGATGACCTCTTGAAAATTTCCTAAAAATCATGTGAGTGAGATAATACATGCGAAAATGACACGTGTTGGTTTGTGACTATAGTTTTCGCACTTGGAAGTGGTTCAAGACAAGTAAGAACATAGTCATATCGCGGTAGACGTAGGAGAATGTCAGGACCATCAGGTGCCAAATTCAAATTCTAAATCTTGGTCTGAATCCTAAGAAATTTACATGTATATTTTGATGAGTTGATCTTATGAATCAAGTCTCCTTTACGAAAAGTTCGGGCATTATAAATTGTGCTACTGTTGCGATAGCACTAGATAGTCTTTTCTTACTTGAACTGGTGTTAGGACAATGAACACTACTTGTCTCTACATTAGTAATGTCGATTTTTGTTGATGAAGTATCGCATGATATCGCTTTCTTGCAAATTCTCACTCCAAAGTCGATTTAAGCATAACTTAACTAGTTAAAGTATATATCCTTAACCGAGTGGTCAGACATTCAAATTCTCACACGTTGAACTCAACGTTACACTGATTTTGTGAGTGGTTGATTCTCTTATGCATTTCAGCTGAAACTTACAGCTTGTTGGGTCACGATTGCAACAACTTTAGTAATGAGGTTGATCAGCCTTTGGTTGGCTCGACCATCCCTGAGTATATTCTTCAGCTTCCCAGCGAAGTTAGCAGCAGTCCCGTCGGTAGACTCGTGCGTAAGTCGGGATAGAGATAACAATCATAGATTCTTTTTAGTCGATACATCTATTATTTATTCGTGGTAATGTTCGTTGTATTGACCGTGTCGATGATTCAGAATCTCAAAACAATGTTAAGATCGGGGGTAGTCCTGAAAGTTCCACAGGATAG ATGTTGTTTGTGTTTGCAACCTCACAATGCAAGGAGTCTCACAGAGTTGTATTGAATCTATACGACCTCAGCCGCGGATCGGCTCGACAGTTCTTGACAACATTGTTAGGGAAACCCATTAAAGGCATATGCTTGTTGGGTCACGATTGCAACAACTTTAGTAATGAGGTTGATCAGCCTTTGGTTGGCTCGACCATCCCTGAGTATATTCTTCAGCTTCCCAGCGAAGTTAGCAGCAGTCCCGTCGGTAGACTCGTGCAATCTCAAAACAATGTTAAGATCGGGGGTAGTCCTGAAAGTTCCACAGGATAG ATGTTGTTTGTGTTTGCAACCTCACAATGCAAGGAGTCTCACAGAGTTGTATTGAATCTATACGACCTCAGCCGCGGATCGGCTCGACAGTTCTTGACAACATTGTTAGGGAAACCCATTAAAGGCATATGCTTGTTGGGTCACGATTGCAACAACTTTAGTAATGAGGTTGATCAGCCTTTGGTTGGCTCGACCATCCCTGAGTATATTCTTCAGCTTCCCAGCGAAGTTAGCAGCAGTCCCGTCGGTAGACTCGTGCAATCTCAAAACAATGTTAAGATCGGGGGTAGTCCTGAAAGTTCCACAGGATAG MLFVFATSQCKESHRVVLNLYDLSRGSARQFLTTLLGKPIKGICLLGHDCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVGRLVQSQNNVKIGGSPESSTG Homology
BLAST of Csor.00g153620 vs. ExPASy Swiss-Prot
Match: Q6GLM5 (Desumoylating isopeptidase 1 OS=Xenopus laevis OX=8355 GN=desi1 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06 Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0
BLAST of Csor.00g153620 vs. ExPASy Swiss-Prot
Match: Q6ICB0 (Desumoylating isopeptidase 1 OS=Homo sapiens OX=9606 GN=DESI1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 6.1e-06 Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of Csor.00g153620 vs. ExPASy Swiss-Prot
Match: Q9CQT7 (Desumoylating isopeptidase 1 OS=Mus musculus OX=10090 GN=Desi1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 6.1e-06 Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of Csor.00g153620 vs. ExPASy Swiss-Prot
Match: Q4KM30 (Desumoylating isopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Desi1 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 6.1e-06 Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of Csor.00g153620 vs. NCBI nr
Match: KAG6571583.1 (Desumoylating isopeptidase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 206 bits (523), Expect = 9.21e-67 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Csor.00g153620 vs. NCBI nr
Match: KAG7011326.1 (Desumoylating isopeptidase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 168 bits (425), Expect = 2.55e-51 Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0
BLAST of Csor.00g153620 vs. NCBI nr
Match: XP_022156073.1 (desumoylating isopeptidase 1 isoform X2 [Momordica charantia]) HSP 1 Score: 97.4 bits (241), Expect = 3.75e-22 Identity = 61/139 (43.88%), Postives = 70/139 (50.36%), Query Frame = 0
BLAST of Csor.00g153620 vs. NCBI nr
Match: XP_022156051.1 (desumoylating isopeptidase 1 isoform X1 [Momordica charantia] >XP_022156057.1 desumoylating isopeptidase 1 isoform X1 [Momordica charantia] >XP_022156064.1 desumoylating isopeptidase 1 isoform X1 [Momordica charantia] >XP_022156068.1 desumoylating isopeptidase 1 isoform X1 [Momordica charantia]) HSP 1 Score: 97.4 bits (241), Expect = 4.95e-22 Identity = 61/139 (43.88%), Postives = 70/139 (50.36%), Query Frame = 0
BLAST of Csor.00g153620 vs. NCBI nr
Match: XP_038887396.1 (desumoylating isopeptidase 1 [Benincasa hispida] >XP_038887397.1 desumoylating isopeptidase 1 [Benincasa hispida]) HSP 1 Score: 93.2 bits (230), Expect = 2.75e-20 Identity = 61/139 (43.88%), Postives = 67/139 (48.20%), Query Frame = 0
BLAST of Csor.00g153620 vs. ExPASy TrEMBL
Match: A0A6J1DPL9 (desumoylating isopeptidase 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023019 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.81e-22 Identity = 61/139 (43.88%), Postives = 70/139 (50.36%), Query Frame = 0
BLAST of Csor.00g153620 vs. ExPASy TrEMBL
Match: A0A6J1DPL4 (desumoylating isopeptidase 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023019 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.39e-22 Identity = 61/139 (43.88%), Postives = 70/139 (50.36%), Query Frame = 0
BLAST of Csor.00g153620 vs. ExPASy TrEMBL
Match: A0A0A0L8S4 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G627710 PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.76e-20 Identity = 61/139 (43.88%), Postives = 67/139 (48.20%), Query Frame = 0
BLAST of Csor.00g153620 vs. ExPASy TrEMBL
Match: A0A1S3CMZ0 (desumoylating isopeptidase 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502756 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.50e-18 Identity = 58/139 (41.73%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of Csor.00g153620 vs. ExPASy TrEMBL
Match: E5GB95 (PPPDE domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.50e-18 Identity = 58/139 (41.73%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of Csor.00g153620 vs. TAIR 10
Match: AT3G07090.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 72.8 bits (177), Expect = 1.8e-13 Identity = 50/157 (31.85%), Postives = 68/157 (43.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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