Csor.00g153590 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g153590
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr19: 1188313 .. 1189201 (-)
RNA-Seq ExpressionCsor.00g153590
SyntenyCsor.00g153590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGTCAGTAGAATCAATAGATCATTATATTTCTGGTAAAACCTAATTAGTGATGCAAATCGATGAACATCAACAACAGAATCAAGTTAACTTCCACGAATTCCTGCTTTATTCTCTGAGATTGAAAGGAAAAAAAAAAAAAACTCAGTACCTTGTGATTGTTAATCGAAAATCTAACAGGAATTGCTCGAGCTTGGAAGGAATCAAGAAGAAGAAACTCAGGTATTTCAGATCAATTCCTCTGGTCTTTCGATCAATTACTGATACAAATAGATGGCCATGAAAATCAAATTAAGCTTCAGCAGTTCATGCATTAATCATCTTAGTTTCTTGATCTTGTGGAATTAAAAAAGCATTTGGAAATTGCAGGACAGAAAAGAAACCCACCATGGAACGAGGGAGATCCAATGTTAAATTTGACAGCAAATGGCTTCTACAAGAACTGTGGGGCTTGGAAGGAAGAACAAGAAGAAGAAGAAGAAATTCAGGTATTTCAGATCAATTCCTCTGGTCTTTCGATCAATTACTGATATAAATAGATGGCCATGAAAATCAAATTAAGCTTCAACAATTCATTCATTAATCATCTTAGTTTCTTTATCTTGATACAAATAGATGACCATCAAAATCAAATTAAGCTTCAGCAATTCCTGCATTAATCATCTTAGTTTCTTGATCTTGATACAAATAGATGGCCATGAAAATCAAATTAAGCTTCAGCAATTCATGCATTAATCATCTTAGTTTCTTGATCTTGATACAAATAGATGGCGATCAAAATCAAATTAAGCTTCAGCAATTCATGCATTAATCATCTTAGTTTCTTGATCCTGTGGAATTAAAAAAGCATTTGGAAATTGCAGGACAGAAAAGAAACACACCATGA

mRNA sequence

ATGCAGGTCAGTAGAATCAATAGATCATTATATTTCTGGAATTGCTCGAGCTTGGAAGGAATCAAGAAGAAGAAACTCAGGACAGAAAAGAAACCCACCATGGAACGAGGGAGATCCAATGTTAAATTTGACAGCAAATGGCTTCTACAAGAACTGTGGGGCTTGGAAGGAAGAACAAGAAGAAGAAGAAGAAATTCAGGACAGAAAAGAAACACACCATGA

Coding sequence (CDS)

ATGCAGGTCAGTAGAATCAATAGATCATTATATTTCTGGAATTGCTCGAGCTTGGAAGGAATCAAGAAGAAGAAACTCAGGACAGAAAAGAAACCCACCATGGAACGAGGGAGATCCAATGTTAAATTTGACAGCAAATGGCTTCTACAAGAACTGTGGGGCTTGGAAGGAAGAACAAGAAGAAGAAGAAGAAATTCAGGACAGAAAAGAAACACACCATGA

Protein sequence

MQVSRINRSLYFWNCSSLEGIKKKKLRTEKKPTMERGRSNVKFDSKWLLQELWGLEGRTRRRRRNSGQKRNTP
Homology
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BLAST of Csor.00g153590 vs. NCBI nr
Match: KAG6571586.1 (hypothetical protein SDJN03_28314, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147 bits (371), Expect = 1.66e-44
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MQVSRINRSLYFWNCSSLEGIKKKKLRTEKKPTMERGRSNVKFDSKWLLQELWGLEGRTR 60
          MQVSRINRSLYFWNCSSLEGIKKKKLRTEKKPTMERGRSNVKFDSKWLLQELWGLEGRTR
Sbjct: 1  MQVSRINRSLYFWNCSSLEGIKKKKLRTEKKPTMERGRSNVKFDSKWLLQELWGLEGRTR 60

Query: 61 RRRRNSGQKRNTP 73
          RRRRNSGQKRNTP
Sbjct: 61 RRRRNSGQKRNTP 73

The following BLAST results are available for this feature:
BLAST of Csor.00g153590 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g153590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6571586.11.66e-44100.00hypothetical protein SDJN03_28314, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g153590 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g153590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g153590.m01Csor.00g153590.m01mRNA