Csor.00g152860 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g152860
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr14: 3243470 .. 3243916 (+)
RNA-Seq Expression	Csor.00g152860
Synteny	Csor.00g152860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACCACCAAATTCTGGCGAAACCCAAACTGGGCTTCTCTGCTTCATTCAGAGAAGCCTTCAAAATCCTCTTTAATCATCCAAAGTTCATCTCCCTCGTCCTCATCTCCTCCTTCCCCCTCTTCGCCTCCCTCCTCGCCCACCACATTCTCCTTCACCCAACCTTCATTCAACTCCTCAAACTTCTCTCAGAAGAAAATCCATTTGATCCATCTCCAAGGTACATCATCAGGTGTCGATTAGATGGCAGCACAGCCTGCATCTCGCAGCGCTCCTCTGATGACAACAACTTCAAAGCAACTCTCTCCCACAAGTTTCTGATATCAACTCTCATCTCTTCAGCACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACAGTATCTATATCAGCAGCAATATATGGAGGAAACTCCCAATGGGTTTCAAACAGATGCTAG

mRNA sequence

ATGGAAAACCACCAAATTCTGGCGAAACCCAAACTGGGCTTCTCTGCTTCATTCAGAGAAGCCTTCAAAATCCTCTTTAATCATCCAAAGTTCATCTCCCTCGTCCTCATCTCCTCCTTCCCCCTCTTCGCCTCCCTCCTCGCCCACCACATTCTCCTTCACCCAACCTTCATTCAACTCCTCAAACTTCTCTCAGAAGAAAATCCATTTGATCCATCTCCAAGGTACATCATCAGGTGTCGATTAGATGGCAGCACAGCCTGCATCTCGCAGCGCTCCTCTGATGACAACAACTTCAAAGCAACTCTCTCCCACAAGTTTCTGATATCAACTCTCATCTCTTCAGCACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACAGTATCTATATCAGCAGCAATATATGGAGGAAACTCCCAATGGGTTTCAAACAGATGCTAG

Coding sequence (CDS)

ATGGAAAACCACCAAATTCTGGCGAAACCCAAACTGGGCTTCTCTGCTTCATTCAGAGAAGCCTTCAAAATCCTCTTTAATCATCCAAAGTTCATCTCCCTCGTCCTCATCTCCTCCTTCCCCCTCTTCGCCTCCCTCCTCGCCCACCACATTCTCCTTCACCCAACCTTCATTCAACTCCTCAAACTTCTCTCAGAAGAAAATCCATTTGATCCATCTCCAAGGTACATCATCAGGTGTCGATTAGATGGCAGCACAGCCTGCATCTCGCAGCGCTCCTCTGATGACAACAACTTCAAAGCAACTCTCTCCCACAAGTTTCTGATATCAACTCTCATCTCTTCAGCACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACAGTATCTATATCAGCAGCAATATATGGAGGAAACTCCCAATGGGTTTCAAACAGATGCTAG

Protein sequence

MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQLLKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFFLDLLSTISTVSISAAIYGGNSQWVSNRC

Homology

[Close]

BLAST of Csor.00g152860 vs. NCBI nr
Match: KAG6581013.1 (hypothetical protein SDJN03_21015, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 282 bits (722), Expect = 1.15e-95
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL
Sbjct: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF
Sbjct: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSQWVSNRC 148
           LDLLSTISTVSISAAIYGGNSQWVSNRC
Sbjct: 121 LDLLSTISTVSISAAIYGGNSQWVSNRC 148

[Close]

BLAST of Csor.00g152860 vs. NCBI nr
Match: XP_022935546.1 (uncharacterized protein LOC111442387 [Cucurbita moschata])

HSP 1 Score: 262 bits (669), Expect = 5.46e-85
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           MENHQILAK KLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL
Sbjct: 1   MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF
Sbjct: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNS 141
           LDLLSTISTVSISAAIYGGNS
Sbjct: 121 LDLLSTISTVSISAAIYGGNS 141

[Close]

BLAST of Csor.00g152860 vs. NCBI nr
Match: XP_023521726.1 (uncharacterized protein LOC111785557 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259 bits (662), Expect = 6.29e-84
Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           MENHQILAK KLGFSASFREAFKILFNHP FISLVLISSFPLFASLLAHHILLHPTFIQL
Sbjct: 1   MENHQILAKSKLGFSASFREAFKILFNHPNFISLVLISSFPLFASLLAHHILLHPTFIQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLSEENP DPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF
Sbjct: 61  LKLLSEENPSDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSQ 142
           LDLLSTISTVSISAAIYGGNSQ
Sbjct: 121 LDLLSTISTVSISAAIYGGNSQ 142

[Close]

BLAST of Csor.00g152860 vs. NCBI nr
Match: XP_022983226.1 (uncharacterized protein LOC111481872 [Cucurbita maxima])

HSP 1 Score: 250 bits (639), Expect = 1.92e-80
Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           MENHQILAKPKLGFSASFREAFKILFNHP FISLVLI SFPLFASLLAHHILLHPTFIQL
Sbjct: 1   MENHQILAKPKLGFSASFREAFKILFNHPNFISLVLIFSFPLFASLLAHHILLHPTFIQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLSEENP DPSPRYIIRC+L GSTACISQRS DD+NFK TLSHKFLISTLISSALIFF
Sbjct: 61  LKLLSEENPVDPSPRYIIRCQLGGSTACISQRSPDDDNFKPTLSHKFLISTLISSALIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSQ 142
           LDLLSTISTVSISAAIYGGNSQ
Sbjct: 121 LDLLSTISTVSISAAIYGGNSQ 142

[Close]

BLAST of Csor.00g152860 vs. NCBI nr
Match: XP_038904923.1 (uncharacterized protein LOC120091133 [Benincasa hispida])

HSP 1 Score: 214 bits (544), Expect = 5.87e-66
Identity = 111/142 (78.17%), Postives = 128/142 (90.14%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           M++HQILAK KLGFSAS REAFKILF+ P FI L+++ SFPLFA+LLAHH+LLHPTF+QL
Sbjct: 12  MDSHQILAKQKLGFSASLREAFKILFDCPNFIFLIVVISFPLFAALLAHHVLLHPTFLQL 71

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLS+ENP+DPS R+IIRC+LD  T C SQRSSD++NF A LSH+FLISTL+SS LIFF
Sbjct: 72  LKLLSQENPYDPSQRFIIRCQLDDGTDCFSQRSSDNDNFTANLSHRFLISTLLSSTLIFF 131

Query: 121 LDLLSTISTVSISAAIYGGNSQ 142
           LDLLSTISTVSISAAIYGGNSQ
Sbjct: 132 LDLLSTISTVSISAAIYGGNSQ 153

[Close]

BLAST of Csor.00g152860 vs. ExPASy TrEMBL
Match: A0A6J1F4Z1 (uncharacterized protein LOC111442387 OS=Cucurbita moschata OX=3662 GN=LOC111442387 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 2.65e-85
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           MENHQILAK KLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL
Sbjct: 1   MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF
Sbjct: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNS 141
           LDLLSTISTVSISAAIYGGNS
Sbjct: 121 LDLLSTISTVSISAAIYGGNS 141

[Close]

BLAST of Csor.00g152860 vs. ExPASy TrEMBL
Match: A0A6J1J1I2 (uncharacterized protein LOC111481872 OS=Cucurbita maxima OX=3661 GN=LOC111481872 PE=4 SV=1)

HSP 1 Score: 250 bits (639), Expect = 9.32e-81
Identity = 134/142 (94.37%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           MENHQILAKPKLGFSASFREAFKILFNHP FISLVLI SFPLFASLLAHHILLHPTFIQL
Sbjct: 1   MENHQILAKPKLGFSASFREAFKILFNHPNFISLVLIFSFPLFASLLAHHILLHPTFIQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLSEENP DPSPRYIIRC+L GSTACISQRS DD+NFK TLSHKFLISTLISSALIFF
Sbjct: 61  LKLLSEENPVDPSPRYIIRCQLGGSTACISQRSPDDDNFKPTLSHKFLISTLISSALIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSQ 142
           LDLLSTISTVSISAAIYGGNSQ
Sbjct: 121 LDLLSTISTVSISAAIYGGNSQ 142

[Close]

BLAST of Csor.00g152860 vs. ExPASy TrEMBL
Match: A0A0A0LG51 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835840 PE=4 SV=1)

HSP 1 Score: 210 bits (534), Expect = 7.10e-65
Identity = 111/142 (78.17%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           M++HQILAK KLGFSAS REAFKI F+ P FISLV++ SFP FASLLAHHILLHPTF+QL
Sbjct: 1   MDSHQILAKQKLGFSASLREAFKIFFHCPNFISLVIVFSFPFFASLLAHHILLHPTFVQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLS+ENPFDPS RYIIRC+L  +  C+SQRSSD+ N K TLSH+FLISTL+SS LIFF
Sbjct: 61  LKLLSQENPFDPSQRYIIRCQLGDTRHCLSQRSSDNYNLKETLSHRFLISTLLSSVLIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSQ 142
           LDLLSTISTVSISA+IY GNSQ
Sbjct: 121 LDLLSTISTVSISASIYAGNSQ 142

[Close]

BLAST of Csor.00g152860 vs. ExPASy TrEMBL
Match: A0A5D3CUB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1119G00110 PE=4 SV=1)

HSP 1 Score: 207 bits (527), Expect = 8.09e-64
Identity = 111/142 (78.17%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           M++HQILAK KLGFSA+ REAFKI F+ P FISLV+I S PLFASLLA+HILLHPTF+QL
Sbjct: 1   MDSHQILAKQKLGFSAALREAFKIFFHCPNFISLVIIFSLPLFASLLAYHILLHPTFVQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLS+ENPFDPS  YIIRC+L  +T C SQRSSD+ NFK TLSH+FLISTL+SS LIFF
Sbjct: 61  LKLLSQENPFDPSQGYIIRCQLGDTTDCFSQRSSDNYNFKETLSHRFLISTLLSSVLIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSQ 142
           LDLLSTISTV ISAA+YGGNSQ
Sbjct: 121 LDLLSTISTVFISAAMYGGNSQ 142

[Close]

BLAST of Csor.00g152860 vs. ExPASy TrEMBL
Match: A0A1S4DUQ5 (uncharacterized protein LOC103487071 OS=Cucumis melo OX=3656 GN=LOC103487071 PE=4 SV=1)

HSP 1 Score: 207 bits (527), Expect = 1.46e-63
Identity = 111/142 (78.17%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MENHQILAKPKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           M++HQILAK KLGFSA+ REAFKI F+ P FISLV+I S PLFASLLA+HILLHPTF+QL
Sbjct: 22  MDSHQILAKQKLGFSAALREAFKIFFHCPNFISLVIIFSLPLFASLLAYHILLHPTFVQL 81

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLS+ENPFDPS  YIIRC+L  +T C SQRSSD+ NFK TLSH+FLISTL+SS LIFF
Sbjct: 82  LKLLSQENPFDPSQGYIIRCQLGDTTDCFSQRSSDNYNFKETLSHRFLISTLLSSVLIFF 141

Query: 121 LDLLSTISTVSISAAIYGGNSQ 142
           LDLLSTISTV ISAA+YGGNSQ
Sbjct: 142 LDLLSTISTVFISAAMYGGNSQ 163

The following BLAST results are available for this feature:

BLAST of Csor.00g152860 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g152860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581013.1	1.15e-95	100.00	hypothetical protein SDJN03_21015, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935546.1	5.46e-85	99.29	uncharacterized protein LOC111442387 [Cucurbita moschata]	[more]
XP_023521726.1	6.29e-84	97.89	uncharacterized protein LOC111785557 [Cucurbita pepo subsp. pepo]	[more]
XP_022983226.1	1.92e-80	94.37	uncharacterized protein LOC111481872 [Cucurbita maxima]	[more]
XP_038904923.1	5.87e-66	78.17	uncharacterized protein LOC120091133 [Benincasa hispida]	[more]

BLAST of Csor.00g152860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4Z1	2.65e-85	99.29	uncharacterized protein LOC111442387 OS=Cucurbita moschata OX=3662 GN=LOC1114423...	[more]
A0A6J1J1I2	9.32e-81	94.37	uncharacterized protein LOC111481872 OS=Cucurbita maxima OX=3661 GN=LOC111481872...	[more]
A0A0A0LG51	7.10e-65	78.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835840 PE=4 SV=1	[more]
A0A5D3CUB1	8.09e-64	78.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DUQ5	1.46e-63	78.17	uncharacterized protein LOC103487071 OS=Cucumis melo OX=3656 GN=LOC103487071 PE=...	[more]

BLAST of Csor.00g152860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36714:SF1	T23E23.1	coord: 1..142
None	No IPR available	PANTHER	PTHR36714	T23E23.1	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g152860.m01	Csor.00g152860.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane