Csor.00g152850 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g152850
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr14: 3244120 .. 3244458 (+)
RNA-Seq Expression	Csor.00g152850
Synteny	Csor.00g152850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTGTTATCTCAATCTTGGATAAGAACAATGGCTACATAGCAATTGGAGTGGCTGCATATCTAAGCAGAGGCAGCAGGAAGTTAGGGCTAAGTTTGATGCTGGTTTTCTTTGCTTTGAAGGTGGCTCTTGGGCTGCCATGTCTCTATGCTTTGTGGAATCAGGGGAGTTGTGGGGCATTGGGGAATGTGGTGTCCGTGAGTTTCAAGTGTGTGGGGGATATTCTAATGTGGATTGTTCTTATGGTTTATTTCTATGACTGTAAGAGGCAGTTTCTGGAGAAGAAGATCGATTTGGAGAATAATGGTAAAGCCATTGAAGCTACTCAACAATAA

mRNA sequence

ATGGGAATTGTTATCTCAATCTTGGATAAGAACAATGGCTACATAGCAATTGGAGTGGCTGCATATCTAAGCAGAGGCAGCAGGAAGTTAGGGCTAAGTTTGATGCTGGTTTTCTTTGCTTTGAAGGTGGCTCTTGGGCTGCCATGTCTCTATGCTTTGTGGAATCAGGGGAGTTGTGGGGCATTGGGGAATGTGGTGTCCGTGAGTTTCAAGTGTGTGGGGGATATTCTAATGTGGATTGTTCTTATGGTTTATTTCTATGACTGTAAGAGGCAGTTTCTGGAGAAGAAGATCGATTTGGAGAATAATGGTAAAGCCATTGAAGCTACTCAACAATAA

Coding sequence (CDS)

ATGGGAATTGTTATCTCAATCTTGGATAAGAACAATGGCTACATAGCAATTGGAGTGGCTGCATATCTAAGCAGAGGCAGCAGGAAGTTAGGGCTAAGTTTGATGCTGGTTTTCTTTGCTTTGAAGGTGGCTCTTGGGCTGCCATGTCTCTATGCTTTGTGGAATCAGGGGAGTTGTGGGGCATTGGGGAATGTGGTGTCCGTGAGTTTCAAGTGTGTGGGGGATATTCTAATGTGGATTGTTCTTATGGTTTATTTCTATGACTGTAAGAGGCAGTTTCTGGAGAAGAAGATCGATTTGGAGAATAATGGTAAAGCCATTGAAGCTACTCAACAATAA

Protein sequence

MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ

Homology

[Close]

BLAST of Csor.00g152850 vs. NCBI nr
Match: KAG6581014.1 (hypothetical protein SDJN03_21016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219 bits (559), Expect = 5.74e-72
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG
Sbjct: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ
Sbjct: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112

[Close]

BLAST of Csor.00g152850 vs. NCBI nr
Match: XP_022983226.1 (uncharacterized protein LOC111481872 [Cucurbita maxima])

HSP 1 Score: 218 bits (554), Expect = 3.25e-68
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKN+GYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG
Sbjct: 218 MGIVISILDKNHGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 277

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ
Sbjct: 278 ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 329

[Close]

BLAST of Csor.00g152850 vs. NCBI nr
Match: XP_022935546.1 (uncharacterized protein LOC111442387 [Cucurbita moschata])

HSP 1 Score: 216 bits (550), Expect = 1.31e-67
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKN+GYIAIGVAAYLSRGSRKLGLSLML FFALKVALGLPCLYALWNQGSCG
Sbjct: 218 MGIVISILDKNHGYIAIGVAAYLSRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCG 277

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ
Sbjct: 278 ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 329

[Close]

BLAST of Csor.00g152850 vs. NCBI nr
Match: XP_023521726.1 (uncharacterized protein LOC111785557 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216 bits (549), Expect = 1.85e-67
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKN+GYIAIGVAAYLSRG RKLGLSLMLVFFALKVALGLPCLYALWNQGSCG
Sbjct: 218 MGIVISILDKNHGYIAIGVAAYLSRGRRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 277

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ
Sbjct: 278 ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 329

[Close]

BLAST of Csor.00g152850 vs. NCBI nr
Match: KAG7017753.1 (hypothetical protein SDJN02_19619, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219 bits (559), Expect = 6.43e-67
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG
Sbjct: 400 MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 459

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ
Sbjct: 460 ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 511

[Close]

BLAST of Csor.00g152850 vs. ExPASy TrEMBL
Match: A0A6J1J1I2 (uncharacterized protein LOC111481872 OS=Cucurbita maxima OX=3661 GN=LOC111481872 PE=4 SV=1)

HSP 1 Score: 218 bits (554), Expect = 1.57e-68
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKN+GYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG
Sbjct: 218 MGIVISILDKNHGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 277

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ
Sbjct: 278 ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 329

[Close]

BLAST of Csor.00g152850 vs. ExPASy TrEMBL
Match: A0A6J1F4Z1 (uncharacterized protein LOC111442387 OS=Cucurbita moschata OX=3662 GN=LOC111442387 PE=4 SV=1)

HSP 1 Score: 216 bits (550), Expect = 6.33e-68
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKN+GYIAIGVAAYLSRGSRKLGLSLML FFALKVALGLPCLYALWNQGSCG
Sbjct: 218 MGIVISILDKNHGYIAIGVAAYLSRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCG 277

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ
Sbjct: 278 ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 329

[Close]

BLAST of Csor.00g152850 vs. ExPASy TrEMBL
Match: A0A5D3CUB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1119G00110 PE=4 SV=1)

HSP 1 Score: 206 bits (524), Expect = 5.37e-64
Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKN+GYIAIGVAAYLSR SRKLG SLMLVFFALKVA GLPCLYALW++GSCG
Sbjct: 218 MGIVISILDKNHGYIAIGVAAYLSRDSRKLGFSLMLVFFALKVAFGLPCLYALWHEGSCG 277

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDI+MW+VLMVYFYDCKR+FLEKKIDLENNGKAIEATQQ
Sbjct: 278 ALGNVVSVSFKCVGDIVMWVVLMVYFYDCKREFLEKKIDLENNGKAIEATQQ 329

[Close]

BLAST of Csor.00g152850 vs. ExPASy TrEMBL
Match: A0A1S4DUQ5 (uncharacterized protein LOC103487071 OS=Cucumis melo OX=3656 GN=LOC103487071 PE=4 SV=1)

HSP 1 Score: 206 bits (524), Expect = 9.66e-64
Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKN+GYIAIGVAAYLSR SRKLG SLMLVFFALKVA GLPCLYALW++GSCG
Sbjct: 239 MGIVISILDKNHGYIAIGVAAYLSRDSRKLGFSLMLVFFALKVAFGLPCLYALWHEGSCG 298

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDI+MW+VLMVYFYDCKR+FLEKKIDLENNGKAIEATQQ
Sbjct: 299 ALGNVVSVSFKCVGDIVMWVVLMVYFYDCKREFLEKKIDLENNGKAIEATQQ 350

[Close]

BLAST of Csor.00g152850 vs. ExPASy TrEMBL
Match: A0A0A0LG51 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835840 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 1.52e-63
Identity = 102/112 (91.07%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MGIVISILDKNNGYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCG 60
           MGIVISILDKN+GYIAIGVAAYLSRGSRKLG SLMLVFFALKVA  LPCLYALWN+GSCG
Sbjct: 218 MGIVISILDKNHGYIAIGVAAYLSRGSRKLGFSLMLVFFALKVAFALPCLYALWNEGSCG 277

Query: 61  ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ 112
           ALGNVVSVSFKCVGDI+MW+VLMVYFYDCKR+FLEKKIDLENNGKAI+A QQ
Sbjct: 278 ALGNVVSVSFKCVGDIVMWVVLMVYFYDCKREFLEKKIDLENNGKAIKANQQ 329

[Close]

BLAST of Csor.00g152850 vs. TAIR 10
Match: AT1G23830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-10
Identity = 34/107 (31.78%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 1   MGIVISILDKNN------GYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALW 60
           MG+V+S+L+++       G  A+ ++ +  +G  K  L LML+F    +A  +PCLY+  
Sbjct: 232 MGLVVSVLEEDEDGQGIYGGDALSLSGWYRKGHEKRDLWLMLMFLVFGLATRMPCLYSKC 291

Query: 61  NQGSCGALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLE 102
           +    G +     V   CVG++L W+  +  ++DCK   L KK D+E
Sbjct: 292 SASGNGVMYTGFYVGLICVGNLLKWVTCLACYHDCKTMVLRKKRDVE 338

[Close]

BLAST of Csor.00g152850 vs. TAIR 10
Match: AT1G23850.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 6.0e-10
Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 1   MGIVISILDKNN------GYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALW 60
           MG+V+S+L++        G  A+ +++   +G  K GL +MLVF    +A+ +PC     
Sbjct: 236 MGLVVSVLEEEENGQSIYGTDALTLSSNYGKGHEKRGLQVMLVFLVFAIAMRMPCFCFKC 295

Query: 61  NQGSCG--ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGK 106
            + S G   L     V   CVG+++ W+  +V++ DC+   LEKK D+E   K
Sbjct: 296 TESSNGNRVLYTSFYVGLICVGNMIKWVACVVFYEDCRTSVLEKKGDVEIGSK 348

[Close]

BLAST of Csor.00g152850 vs. TAIR 10
Match: AT1G23840.1 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23850.1); Has 53 Blast hits to 48 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 6.6e-09
Identity = 35/114 (30.70%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 1   MGIVISILDKNN------GYIAIGVAAYLSRGSRKLGLSLMLVFFALKVALGLPCLYALW 60
           + +V+S+L++        G  A+ ++A+  RG  K    +MLVF    +   +PCLY   
Sbjct: 222 ISMVVSVLEEEEDSKGIYGSSALSLSAWYLRGQEKRDFWMMLVFLVGALVTRMPCLYYKC 281

Query: 61  NQ--GSCGALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKA 107
           ++     G L   + VS  CVG+++ W+  +V+++DC  + L KK D+E   KA
Sbjct: 282 SESLSGNGVLYTGLYVSLICVGNVVKWVSCVVWYHDCNTRVLRKKGDVEIGSKA 335

The following BLAST results are available for this feature:

BLAST of Csor.00g152850 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g152850 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581014.1	5.74e-72	100.00	hypothetical protein SDJN03_21016, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022983226.1	3.25e-68	99.11	uncharacterized protein LOC111481872 [Cucurbita maxima]	[more]
XP_022935546.1	1.31e-67	98.21	uncharacterized protein LOC111442387 [Cucurbita moschata]	[more]
XP_023521726.1	1.85e-67	98.21	uncharacterized protein LOC111785557 [Cucurbita pepo subsp. pepo]	[more]
KAG7017753.1	6.43e-67	100.00	hypothetical protein SDJN02_19619, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Csor.00g152850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J1I2	1.57e-68	99.11	uncharacterized protein LOC111481872 OS=Cucurbita maxima OX=3661 GN=LOC111481872...	[more]
A0A6J1F4Z1	6.33e-68	98.21	uncharacterized protein LOC111442387 OS=Cucurbita moschata OX=3662 GN=LOC1114423...	[more]
A0A5D3CUB1	5.37e-64	91.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DUQ5	9.66e-64	91.96	uncharacterized protein LOC103487071 OS=Cucumis melo OX=3656 GN=LOC103487071 PE=...	[more]
A0A0A0LG51	1.52e-63	91.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835840 PE=4 SV=1	[more]

BLAST of Csor.00g152850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23830.1	2.1e-10	31.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G23850.1	6.0e-10	31.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G23840.1	6.6e-09	30.70	unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structu...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36714	T23E23.1	coord: 1..111
None	No IPR available	PANTHER	PTHR36714:SF1	T23E23.1	coord: 1..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g152850.m01	Csor.00g152850.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane