Csor.00g151970 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g151970
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Transmembrane protein, putative
Location	Csor_Chr14: 3745295 .. 3748417 (+)
RNA-Seq Expression	Csor.00g151970
Synteny	Csor.00g151970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTAACGAACTTCATCTTGACGGTGGCCGGCGTTGGCGCCGTGGTTCTTCTTTTGAGGAGCGATGTGAAGCAATCGGCTTCAATCTTCAGGCGCAACGTCAAACACATCCGCCAGTGGCTTGAAGAAGAATCTGCCTCTGCCTCCAAGTAATTTTTTCTTTTAAATTCTTAGTTTATTTTCTTGTTTGGTTCATATTTGTTTTCTTGAAGTTCATTTGTATTAGTGCTGTCGGAATGAATCAATAGACCTTAGCATTTGGTTCTTGTTGGAAATGATTGTGTGTGTTAGGAATTTAATACGCAGGCATTTGGAGTATTCATGTTTGTTGCAATTGCGTTCCGGCGCTGGGTTTATTGTTGGTTAACCAAAAGAAAACCTGCTTTGAATTCAATTTGAGTAAATCTTTACTCTCTGGGATTAATGTGGAAAGGGAGAGAATCACTAGGGTGACTGATTTTGGTTGTGTGTTTTGGTGGAAATCCAAGAAAGAGGTCATTTGGAGACGCATCCAAGATAAAAAAAATATTGGGGAAATTAACTAATATAGGAGATCAACAAGGCTAAATCAGTCGGAAATGAAGTTCTCCTGGCTAAAGGTTTCTCTAGAGATCGAGGATTTGTGGCATCAAATTATTGAAGAAAAATTTGATGTTGATTGGGTGAGGTTACAAATGTGAAGAGAAATAAGTTGCTGGTAGAACCCCTCCATGTTTAGACTTGTGATCTAACAATTCTCAGTAGGAAATGGCATGAAGATTTCCTTCTGCAATAACAGATGGAAGAGAATCATCTCCTGAGGTGTATGTTTTGGAGAATTTCAACTGTGGCTAATCTGTTAGATGGATGCATTCACTGTGAAGGGTTTTCTGGATGAGAAGTAAATTCCTGGAAATTTCTATGAGAAAATATTTTTCAGGTGAAGAAGCAAGCAAATATGATGGCTTTGCTTGCGAAAGACCTAGCAACAAGAAGGATATTAAAGTACGGATTCTAAAATCATCTGGATGTTCTGAAACGTGAAAAGAAGAGGGTTTAAAGAGAAATCCATCAAAGTTGGTATGAAATGGAAAGATGCCGCAGAAGTTTCAAGTTTTTTCTTTCTGGACTTCGCGGTTTTGAAGCCATGAATACTACCACTAGGACTGCAGAAAAGGTGTCCTGATAGGGCATTTCCGCTTCGTCCAGTTTTTTTTTTTTTTTTTTTTGTAATGCCAAGGAGGAGAGCCAACTACCAGTTTTTTTTTCATTCTGATTTATCTCACATGTTGGAGCACAAACTTGGGGTATACACATATACACTGGGAATTTCTTAATTCGTTAAAAAACTCTTGAGTAGATGCTGTGGGTACTCAATTTAAAGAAGCATATGAAAATTGCTCTGCCCAACTTAATTATGTCCATACTGTGGTAGTTATGGTTGGAAGGTAACTATTAAAGATTCAATAATAAGGAGAGGAATAGGATGAGTAGAGGAAATTCTTGAATAAGAGTAAAGCTCTGGGTAGAGAGATTGATGTTTCTTTGAAGGTAGGTTTGATAATCATTTGTTCAATTGGGATATTATGGGCATGACCGAAGTTAGAAATGTTTAGAAATGGAAAGAACATATATTGATAAATAAGATAATATTTCCCTTGGCAAGAGGTTGTTTAAATGAAGATTTTAAAAGATGGACAATGCATAGCAATATTGATAATGAAAGAAATGTTTGCATTTTCCTAACACGTATTAGTCTTGTGCTTATGGGGGTGAGTGTTAGCAAGAAGGAAAAGGAAAAGAGGGTAAAGATATGGTTGAAAAATGAAGGTTACAGTACCTTAATTTAGTGGCAGCTTTTTGCGTTTCAAACATTTCCTGGCCGTCAGCTCTCATGAGGAACTCCTTAAAAACTTTTGAGCTGTATTTCCGGTACGTATTCCCTAATGATTGGTAATGGATACTTATAAATTAGTCAGTCGTGGTTTTGGAGTAGGCTTGCAGTGCAAAGAGAACCGCTAGAGAATCTTATCTTCTTGTCAAAGGTTATCTAGACCATTACTCGTCTTCTAGAATTCTAAGGAAAGTTTCCTTTGGTCTTGGAAAGTTAAAAAACAGATTGAGAAAGGGACTTGTTGATTGATTGATTGGTTAGGTCTATCGTCTTCGTTCTAATATTATTAGTTTATACTAATTTTTCTTTTCATTGATGTCAACTGGGGATGTACTTTTCTCGAATCTTGATCAACTGTCCAAATTGATTCCTGGAATTTGCTTTTGGTTTAGATTGATTGTTGTGTTGGAGTTCGTGTTCAATCCGTCGCTAGACGCTCAATTTATTAATGTTTCATATGACAATAGCAAGTAAAGGACATGAGAATAAAGTAATAGTGGAACTCCAGAGCCTAATAGAAATGTACTATTTACAGTATCATTGTATTGCTGTTTGATGAAGATTACAGGCTACCTAGACTTTCAAGAGTTTTGGCATTCTCCTCTCGTAGTCACTCTAGTCACTTCCATGTAACTAGTTGGCTGCCCTCTCTCCTCTCAGTCGTCCTTTTCTATTGTCAATAGTATTGTTATAAAATGCCCTGATTGTACCTATCCCTGCTTGCAACTAACTTTCACTTAAAATGTCCTCCTTTGCCATCTTTCTTGGGATTGCCATCTTTCTTGGGAATACTTTATGGACTGGGAAGTTGGGCGCCTATTGGCTTACTTCCTGTGCCTCTGGCTTCTCATATCTGTTTCTTTGTTTTTAATTAATCAATTAATTTATATGATATTAGACCCAATTGCATAATGTTTAGCTAGTTTAATGCAGTGTAGCTACGTTCGGCCAGAAGAATGTTAAAACCCATTCGAGTTGGCGAGTGAAGAATATGATAGATAGTATAAATAAAAAGTAATAGAAGAAAAGATATCAAGCTTATGGGTTATGGCGATTTTCATAGAACCTCTGTCTTTAAGATGTCTATTTGGCATGTGAATGCAACAGGCTGCTGCTCCTTTTGTAGGCCATGCTTGTGTAATGTAATATGACTGTGATGTTATTCTTTCAGGACTGTGGAGAAGGCAACCAAGGAGCTGGAAGCCAAAACTTCTCAGAAGGATATTCCAAAAGATGACAAGCACTAG

mRNA sequence

ATGGCTTTAACGAACTTCATCTTGACGGTGGCCGGCGTTGGCGCCGTGGTTCTTCTTTTGAGGAGCGATGTGAAGCAATCGGCTTCAATCTTCAGGCGCAACGTCAAACACATCCGCCAGTGGCTTGAAGAAGAATCTGCCTCTGCCTCCAAGACTGTGGAGAAGGCAACCAAGGAGCTGGAAGCCAAAACTTCTCAGAAGGATATTCCAAAAGATGACAAGCACTAG

Coding sequence (CDS)

ATGGCTTTAACGAACTTCATCTTGACGGTGGCCGGCGTTGGCGCCGTGGTTCTTCTTTTGAGGAGCGATGTGAAGCAATCGGCTTCAATCTTCAGGCGCAACGTCAAACACATCCGCCAGTGGCTTGAAGAAGAATCTGCCTCTGCCTCCAAGACTGTGGAGAAGGCAACCAAGGAGCTGGAAGCCAAAACTTCTCAGAAGGATATTCCAAAAGATGACAAGCACTAG

Protein sequence

MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELEAKTSQKDIPKDDKH

Homology

[Close]

BLAST of Csor.00g151970 vs. NCBI nr
Match: XP_022935264.1 (uncharacterized protein LOC111442202 [Cucurbita moschata] >XP_022935265.1 uncharacterized protein LOC111442202 [Cucurbita moschata] >XP_022983554.1 uncharacterized protein LOC111482124 [Cucurbita maxima] >XP_022983555.1 uncharacterized protein LOC111482124 [Cucurbita maxima] >KAG6581102.1 hypothetical protein SDJN03_21104, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135 bits (340), Expect = 1.03e-39
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60
          MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL
Sbjct: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60

Query: 61 EAKTSQKDIPKDDKH 75
          EAKTSQKDIPKDDKH
Sbjct: 61 EAKTSQKDIPKDDKH 75

[Close]

BLAST of Csor.00g151970 vs. NCBI nr
Match: XP_038899134.1 (uncharacterized protein LOC120086491 [Benincasa hispida])

HSP 1 Score: 133 bits (334), Expect = 8.50e-39
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60
          MALTNFILTVAGV AVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL
Sbjct: 1  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60

Query: 61 EAKTSQKDIPKDDKH 75
          EAKTSQKDIPKDDKH
Sbjct: 61 EAKTSQKDIPKDDKH 75

[Close]

BLAST of Csor.00g151970 vs. NCBI nr
Match: KAG7017833.1 (hypothetical protein SDJN02_19699, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132 bits (332), Expect = 1.72e-38
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60
          MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL
Sbjct: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60

Query: 61 EAKTSQKDIPKDDK 74
          EAKTSQKDIPKDDK
Sbjct: 61 EAKTSQKDIPKDDK 74

[Close]

BLAST of Csor.00g151970 vs. NCBI nr
Match: XP_022156517.1 (uncharacterized protein LOC111023400 [Momordica charantia])

HSP 1 Score: 130 bits (326), Expect = 1.41e-37
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60
          MALTNFILTVAGV AV+LLLRSDVKQSASIFRRNVKHIRQW+EEESASASKTVEKATKEL
Sbjct: 1  MALTNFILTVAGVSAVILLLRSDVKQSASIFRRNVKHIRQWIEEESASASKTVEKATKEL 60

Query: 61 EAKTSQKDIPKDDKH 75
          EAK SQKDIPKDDKH
Sbjct: 61 EAKASQKDIPKDDKH 75

[Close]

BLAST of Csor.00g151970 vs. NCBI nr
Match: KAG7022659.1 (hypothetical protein SDJN02_16393 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128 bits (321), Expect = 8.19e-37
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60
          MALTNFILTVAGV AVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL
Sbjct: 1  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60

Query: 61 EAKTSQKDIPKDDKH 75
          E+KT  KDIPKDDKH
Sbjct: 61 ESKTPHKDIPKDDKH 75

[Close]

BLAST of Csor.00g151970 vs. ExPASy TrEMBL
Match: A0A6J1J664 (uncharacterized protein LOC111482124 OS=Cucurbita maxima OX=3661 GN=LOC111482124 PE=4 SV=1)

HSP 1 Score: 135 bits (340), Expect = 5.00e-40
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60
          MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL
Sbjct: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60

Query: 61 EAKTSQKDIPKDDKH 75
          EAKTSQKDIPKDDKH
Sbjct: 61 EAKTSQKDIPKDDKH 75

[Close]

BLAST of Csor.00g151970 vs. ExPASy TrEMBL
Match: A0A6J1FA54 (uncharacterized protein LOC111442202 OS=Cucurbita moschata OX=3662 GN=LOC111442202 PE=4 SV=1)

HSP 1 Score: 135 bits (340), Expect = 5.00e-40
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60
          MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL
Sbjct: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60

Query: 61 EAKTSQKDIPKDDKH 75
          EAKTSQKDIPKDDKH
Sbjct: 61 EAKTSQKDIPKDDKH 75

[Close]

BLAST of Csor.00g151970 vs. ExPASy TrEMBL
Match: A0A6J1DS71 (uncharacterized protein LOC111023400 OS=Momordica charantia OX=3673 GN=LOC111023400 PE=4 SV=1)

HSP 1 Score: 130 bits (326), Expect = 6.84e-38
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60
          MALTNFILTVAGV AV+LLLRSDVKQSASIFRRNVKHIRQW+EEESASASKTVEKATKEL
Sbjct: 1  MALTNFILTVAGVSAVILLLRSDVKQSASIFRRNVKHIRQWIEEESASASKTVEKATKEL 60

Query: 61 EAKTSQKDIPKDDKH 75
          EAK SQKDIPKDDKH
Sbjct: 61 EAKASQKDIPKDDKH 75

[Close]

BLAST of Csor.00g151970 vs. ExPASy TrEMBL
Match: I3SQG6 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 114 bits (285), Expect = 1.23e-31
Identity = 61/75 (81.33%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKEL 60
          M +TNF+LTVAGV AVVLLLRSDVKQSASIFRRNVKHIR+WLEEE+ S+SKTVEK+TKEL
Sbjct: 1  MGITNFVLTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRKWLEEENISSSKTVEKSTKEL 60

Query: 61 EAKTSQKDIPKDDKH 75
          E K   KDIPK+DKH
Sbjct: 61 ETKVPPKDIPKEDKH 75

[Close]

BLAST of Csor.00g151970 vs. ExPASy TrEMBL
Match: I1N7U0 (Uncharacterized protein OS=Glycine max OX=3847 GN=100797786 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 2.11e-30
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKAT-KE 60
          M LTNF+LTVAGV AVVLLLRSDVKQSASIFRRNVKHIR WLEEESA++SKT+EK+T KE
Sbjct: 1  MGLTNFVLTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRNWLEEESAASSKTMEKSTPKE 60

Query: 61 LEAKTSQKDIPKDDKH 75
          LE+K   KDIPK+DKH
Sbjct: 61 LESKVPPKDIPKEDKH 76

[Close]

BLAST of Csor.00g151970 vs. TAIR 10
Match: AT5G14105.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 6.2e-19
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 1  MALTNFILTVAGVGAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKA--TK 60
          M LTNFILTVAGVGAVV+LLRSDVKQS ++ RRNVKHIR WLEEES++AS    ++   K
Sbjct: 1  MGLTNFILTVAGVGAVVMLLRSDVKQSVTVLRRNVKHIRHWLEEESSAASSKAAESIKPK 60

Query: 61 ELEAKTSQKDIPKD 73
          E+E K  +KDIPK+
Sbjct: 61 EIEVKVPKKDIPKE 74

The following BLAST results are available for this feature:

BLAST of Csor.00g151970 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g151970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935264.1	1.03e-39	100.00	uncharacterized protein LOC111442202 [Cucurbita moschata] >XP_022935265.1 unchar...	[more]
XP_038899134.1	8.50e-39	98.67	uncharacterized protein LOC120086491 [Benincasa hispida]	[more]
KAG7017833.1	1.72e-38	100.00	hypothetical protein SDJN02_19699, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022156517.1	1.41e-37	94.67	uncharacterized protein LOC111023400 [Momordica charantia]	[more]
KAG7022659.1	8.19e-37	94.67	hypothetical protein SDJN02_16393 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g151970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J664	5.00e-40	100.00	uncharacterized protein LOC111482124 OS=Cucurbita maxima OX=3661 GN=LOC111482124...	[more]
A0A6J1FA54	5.00e-40	100.00	uncharacterized protein LOC111442202 OS=Cucurbita moschata OX=3662 GN=LOC1114422...	[more]
A0A6J1DS71	6.84e-38	94.67	uncharacterized protein LOC111023400 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
I3SQG6	1.23e-31	81.33	Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]
I1N7U0	2.11e-30	81.58	Uncharacterized protein OS=Glycine max OX=3847 GN=100797786 PE=4 SV=1	[more]

BLAST of Csor.00g151970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14105.1	6.2e-19	67.57	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..75
None	No IPR available	PANTHER	PTHR35135:SF3	OS05G0517800 PROTEIN	coord: 1..75
None	No IPR available	PANTHER	PTHR35135	OS05G0517800 PROTEIN	coord: 1..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g151970.m01	Csor.00g151970.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I