Csor.00g150820 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g150820
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 4523319 .. 4523603 (+)
RNA-Seq ExpressionCsor.00g150820
SyntenyCsor.00g150820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCATGATACGGCGGCCCTTGTGGTGGCGGAAGCAATAAACCAGAGCTCCCACTGGCCACTCTACAACCGCCGCCACCGCGAACGCCAAGAACCCCAGGGTCGGCCCCACCACCTTGCACCTGCACGGATTGCGGTGGGTTCCACATTCGACGCAGACCGGAACGCCGATTCCGACAGCCATTCGCCCGTATTAGTCACCGGAGCACGACGGAGTATAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTATATGAAAATGGATTATTAG

mRNA sequence

ATGCGCCATGATACGGCGGCCCTTGTGGTGGCGGAAGCAATAAACCAGAGCTCCCACTGGCCACTCTACAACCGCCGCCACCGCGAACGCCAAGAACCCCAGGGTCGGCCCCACCACCTTGCACCTGCACGGATTGCGGTGGGTTCCACATTCGACGCAGACCGGAACGCCGATTCCGACAGCCATTCGCCCGTATTAGTCACCGGAGCACGACGGAGTATAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTATATGAAAATGGATTATTAG

Coding sequence (CDS)

ATGCGCCATGATACGGCGGCCCTTGTGGTGGCGGAAGCAATAAACCAGAGCTCCCACTGGCCACTCTACAACCGCCGCCACCGCGAACGCCAAGAACCCCAGGGTCGGCCCCACCACCTTGCACCTGCACGGATTGCGGTGGGTTCCACATTCGACGCAGACCGGAACGCCGATTCCGACAGCCATTCGCCCGTATTAGTCACCGGAGCACGACGGAGTATAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTATATGAAAATGGATTATTAG

Protein sequence

MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADSDSHSPVLVTGARRSITKKKKKKKKKKKKKYMKMDY
Homology
BLAST of Csor.00g150820 vs. NCBI nr
Match: KAG6581216.1 (hypothetical protein SDJN03_21218, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181 bits (459), Expect = 2.78e-57
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADSD 60
          MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADSD
Sbjct: 1  MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADSD 60

Query: 61 SHSPVLVTGARRSITKKKKKKKKKKKKKYMKMDY 94
          SHSPVLVTGARRSITKKKKKKKKKKKKKYMKMDY
Sbjct: 61 SHSPVLVTGARRSITKKKKKKKKKKKKKYMKMDY 94

BLAST of Csor.00g150820 vs. NCBI nr
Match: OIW02674.1 (hypothetical protein TanjilG_29450 [Lupinus angustifolius])

HSP 1 Score: 64.3 bits (155), Expect = 4.56e-11
Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 0

Query: 1  MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADSD 60
          MRHD A L +AE I+ S++ PL+ RRHR+RQ+P+  P+H APAR+A G+T +A+ N  S+
Sbjct: 24 MRHDFATLHMAEGIDDSTYRPLHQRRHRKRQKPERWPNHFAPARVAGGATLNANWNPYSN 83

BLAST of Csor.00g150820 vs. NCBI nr
Match: KAF1889378.1 (hypothetical protein Lal_00024703 [Lupinus albus])

HSP 1 Score: 64.7 bits (156), Expect = 7.17e-10
Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1  MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADSD 60
          +RHD A L +AE I++S++ PL+ RRHR+RQEP+  P+H APAR+A G+T +A+ N  S+
Sbjct: 25 VRHDFATLHMAEGIDESTYRPLHQRRHRKRQEPKRWPNHFAPARVAGGATLNANWNPYSN 84

BLAST of Csor.00g150820 vs. NCBI nr
Match: GFY86736.1 (hypothetical protein Acr_05g0003750 [Actinidia rufa])

HSP 1 Score: 58.2 bits (139), Expect = 4.61e-08
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 0

Query: 3  HDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRN 56
          HD+AAL  AEA+N+  H P ++    ERQEP+  PHHLAPAR+A  +T D  R+
Sbjct: 41 HDSAALGPAEAVNEGPHRPFHDGGDHERQEPERGPHHLAPARVAGRATLDTYRH 94

BLAST of Csor.00g150820 vs. NCBI nr
Match: KZV48922.1 (hypothetical protein F511_09710 [Dorcoceras hygrometricum])

HSP 1 Score: 55.1 bits (131), Expect = 1.63e-07
Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 0

Query: 1  MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADS 59
          M H TAA  V E +++S H PL  RR RER E + RPHHLA A +A   T  A RN +S
Sbjct: 19 MSHYTAAFGVPETVDKSPHRPLNQRRRRERHEAERRPHHLASAWVARRPTLHAYRNPES 77

BLAST of Csor.00g150820 vs. ExPASy TrEMBL
Match: A0A4P1R5K4 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_29450 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.21e-11
Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 0

Query: 1  MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADSD 60
          MRHD A L +AE I+ S++ PL+ RRHR+RQ+P+  P+H APAR+A G+T +A+ N  S+
Sbjct: 24 MRHDFATLHMAEGIDDSTYRPLHQRRHRKRQKPERWPNHFAPARVAGGATLNANWNPYSN 83

BLAST of Csor.00g150820 vs. ExPASy TrEMBL
Match: A0A6A5NUA1 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00024703 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.47e-10
Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1  MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADSD 60
          +RHD A L +AE I++S++ PL+ RRHR+RQEP+  P+H APAR+A G+T +A+ N  S+
Sbjct: 25 VRHDFATLHMAEGIDESTYRPLHQRRHRKRQEPKRWPNHFAPARVAGGATLNANWNPYSN 84

BLAST of Csor.00g150820 vs. ExPASy TrEMBL
Match: A0A7J0EKJ5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_05g0003750 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.23e-08
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 0

Query: 3  HDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRN 56
          HD+AAL  AEA+N+  H P ++    ERQEP+  PHHLAPAR+A  +T D  R+
Sbjct: 41 HDSAALGPAEAVNEGPHRPFHDGGDHERQEPERGPHHLAPARVAGRATLDTYRH 94

BLAST of Csor.00g150820 vs. ExPASy TrEMBL
Match: A0A2Z7CPA9 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_09710 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.89e-08
Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 0

Query: 1  MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRNADS 59
          M H TAA  V E +++S H PL  RR RER E + RPHHLA A +A   T  A RN +S
Sbjct: 19 MSHYTAAFGVPETVDKSPHRPLNQRRRRERHEAERRPHHLASAWVARRPTLHAYRNPES 77

BLAST of Csor.00g150820 vs. ExPASy TrEMBL
Match: A0A0A9U3K1 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.89e-07
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0

Query: 1  MRHDTAALVVAEAINQSSHWPLYNRRHRERQEPQGRPHHLAPARIAVGSTFDADRN 56
          +RHD AAL VAE +++ +  P  +  H ER EPQ RP HLAPAR+A      A R+
Sbjct: 22 VRHDAAALAVAEQVHRRAEGPFDDPGHHERHEPQRRPDHLAPARVAPCPALHAHRH 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6581216.12.78e-57100.00hypothetical protein SDJN03_21218, partial [Cucurbita argyrosperma subsp. sorori... [more]
OIW02674.14.56e-1151.67hypothetical protein TanjilG_29450 [Lupinus angustifolius][more]
KAF1889378.17.17e-1051.67hypothetical protein Lal_00024703 [Lupinus albus][more]
GFY86736.14.61e-0851.85hypothetical protein Acr_05g0003750 [Actinidia rufa][more]
KZV48922.11.63e-0750.85hypothetical protein F511_09710 [Dorcoceras hygrometricum][more]
Match NameE-valueIdentityDescription
A0A4P1R5K42.21e-1151.67Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_29450 PE=4 S... [more]
A0A6A5NUA13.47e-1051.67Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00024703 PE=4 SV=1[more]
A0A7J0EKJ52.23e-0851.85Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_05g0003750 PE=4 SV=1[more]
A0A2Z7CPA97.89e-0850.85Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_09710 PE=4... [more]
A0A0A9U3K12.89e-0748.21Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g150820.m01Csor.00g150820.m01mRNA