Csor.00g149990 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g149990
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-CH-type domain-containing protein
Location	Csor_Chr14: 5000103 .. 5001989 (+)
RNA-Seq Expression	Csor.00g149990
Synteny	Csor.00g149990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGAAGTGTCTCTATACGTAGAGGAGTTCCAATTCCAAACGTCCTACCAAGTCTCACGCTGTAGGATCTGCCACGAAGACGAACTCGAAACTGCCCTCCAACTCGAAGCCCCCTGTTCCTGTTCTGGTACCATTAAGGTAATCCCCAAATTCCCATTCCTTCTTCCACTTCCGAATTTCAATTTGAATTTCAATTTGAATTTCAATTTGTCTTTTCAGTTCGCTCACAGAGATTGTATTCAGAGATGGTGCACCGAAAAAGGCAGCACAGTCTGTGAAATTTGTCTCCAGGTTCGCTGTTCTTTTCCTCTGTTCTTCCTGATCTTTGCGTTTCTGGGTTTTCTTTAAATTGAAATTTTATTTATTTTTTATTTTCATCTCTGAATCCATATGGGTTTCTTGCCCACTGGATTTCGTGTTTTTCTTTGTATTCAAGTCTCTCTGAAAAAACATTCTATTTTCTTACTTTTTTAATTTTAAAAATACAATTTTTTTCCCTTCAAATATTACTACTTTTCGTCTTGAAATATTTTAATGCGTTATTTAATACATGAAATTAATAAATGTTTGCCTATCCCTTCTACATTAATTTAAAAACAATAATTTAAAATTCTGTTATGAATTAAAAGTATAGACATTAAACAACAGGAATTTTTTTTATTTTTATTTTTTAAATTTGTTTTTGTTCTTACAGAATTACGAACCAGGCTACACGTCACCTTCTAAGAAGCCTCAACGCGGCGATCCAGGTGTCACTATCAGGTATTTTTTTTTCCTTTTCCACTTTGTAATGGAAATGGGAAATTTCTTAAATCGCGACCCAGACATGCTTTATAGCCAATTCCTCGGCTCTGCTGGCGATTTTTTAAAAAAACATTTAAGGAAATGAAATTAAAAAAAATTAGTTGGCAGGGATAGTTTGCAAATCCCTAGAAACGAGGAAGAAGAGGCGGCAGAGCCAGCGTCGCCACCCGCAGACGGAGGCGCGTCGGACTCCACTTGCTCCACCACCGCTGACCGTGGTGCTTCCTGCTGTAAATCCGTGGCTCTCACTGTAAGTTCCTCAATTATCAAACACTAATTTCATAGTGGGTTTAACTTATCACTACTTAATTGGAATTCATTATGTCATACACTAATTTCATTATTTTATTCTAATTAATTCCACCCACTATCATAGGTTAAAATTTAAATATAGATATTAATAACATTCATTCATCTAAACTATAGTTCATAAATTTTAGTGGGGTTCGACTATGATTATATTTTTTAGTATAATGTAGGTCACCAACCCAACAAATAACAGTTAGCCCTAGCAGCCTACCATTTCGCTTAAAAAATTTCACAAACAAATTTACCCTTTTAATACTAAGATTCCCTTATGACTTTATAAAAAAGTTCACATTTTTGTATTAATTTCCTTTGTTATGCAGTTTACTTTAATGTTGTTGGCGAGACATTTCTATGAAGTGGTTACTATTGACACTGCACAGTACCCATTTACACTTGCCACTGTGAGTACTCGATTCTATTCGGTTCGATTGAAGGAGTAATATATATTAATTATTTTGTCGTGCGTGTTTGATTTAGGTTCTGATTTTAAGAGCTAGTGGGATTATTTTTCCTATGTACGTGATAATTCGAACGATTAGTGTCATTCAAAACAGTGCTCGTCAGAATCGGTATCGGTATCAGAACGAAGAGGTGAGTTTTAGTTTACATTTGGAAAGCCGAGAAAAGGAGGAAAGTTGAAGTCTTTTTAAAATGGGTGACTGATCGAGAGTTTTGTTATTGTGTATGAAATAGGAATCTGATGTTGATAGTGATGACGATGATATTTCGAGGTTTGAAGAGGATGATAGAAGGGTGCATCATATTGTCTAA

mRNA sequence

ATGGGCGAAGTGTCTCTATACGTAGAGGAGTTCCAATTCCAAACGTCCTACCAAGTCTCACGCTGTAGGATCTGCCACGAAGACGAACTCGAAACTGCCCTCCAACTCGAAGCCCCCTGTTCCTGTTCTGGTACCATTAAGTTCGCTCACAGAGATTGTATTCAGAGATGGTGCACCGAAAAAGGCAGCACAGTCTGTGAAATTTGTCTCCAGAATTACGAACCAGGCTACACGTCACCTTCTAAGAAGCCTCAACGCGGCGATCCAGGTGTCACTATCAGGGATAGTTTGCAAATCCCTAGAAACGAGGAAGAAGAGGCGGCAGAGCCAGCGTCGCCACCCGCAGACGGAGGCGCGTCGGACTCCACTTGCTCCACCACCGCTGACCGTGGTGCTTCCTGCTGTAAATCCGTGGCTCTCACTTTTACTTTAATGTTGTTGGCGAGACATTTCTATGAAGTGGTTACTATTGACACTGCACAGTACCCATTTACACTTGCCACTGTTCTGATTTTAAGAGCTAGTGGGATTATTTTTCCTATGTACGTGATAATTCGAACGATTAGTGTCATTCAAAACAGTGCTCGTCAGAATCGGTATCGGTATCAGAACGAAGAGGAATCTGATGTTGATAGTGATGACGATGATATTTCGAGGTTTGAAGAGGATGATAGAAGGGTGCATCATATTGTCTAA

Coding sequence (CDS)

ATGGGCGAAGTGTCTCTATACGTAGAGGAGTTCCAATTCCAAACGTCCTACCAAGTCTCACGCTGTAGGATCTGCCACGAAGACGAACTCGAAACTGCCCTCCAACTCGAAGCCCCCTGTTCCTGTTCTGGTACCATTAAGTTCGCTCACAGAGATTGTATTCAGAGATGGTGCACCGAAAAAGGCAGCACAGTCTGTGAAATTTGTCTCCAGAATTACGAACCAGGCTACACGTCACCTTCTAAGAAGCCTCAACGCGGCGATCCAGGTGTCACTATCAGGGATAGTTTGCAAATCCCTAGAAACGAGGAAGAAGAGGCGGCAGAGCCAGCGTCGCCACCCGCAGACGGAGGCGCGTCGGACTCCACTTGCTCCACCACCGCTGACCGTGGTGCTTCCTGCTGTAAATCCGTGGCTCTCACTTTTACTTTAATGTTGTTGGCGAGACATTTCTATGAAGTGGTTACTATTGACACTGCACAGTACCCATTTACACTTGCCACTGTTCTGATTTTAAGAGCTAGTGGGATTATTTTTCCTATGTACGTGATAATTCGAACGATTAGTGTCATTCAAAACAGTGCTCGTCAGAATCGGTATCGGTATCAGAACGAAGAGGAATCTGATGTTGATAGTGATGACGATGATATTTCGAGGTTTGAAGAGGATGATAGAAGGGTGCATCATATTGTCTAA

Protein sequence

MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTEKGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGASDSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFPMYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV

Homology

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BLAST of Csor.00g149990 vs. ExPASy Swiss-Prot
Match: Q32L65 (E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.3e-07
Identity = 25/69 (36.23%), Postives = 35/69 (50.72%), Query Frame = 0


Query: 22  CRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTEKGSTVCEICLQNYEPGYTSPS 81
           CRICHE        L +PC CSGT+   H+ C++RW +   ++ CE+C   +     S S
Sbjct: 64  CRICHEG--ANGESLLSPCGCSGTLGAVHKSCLERWLSSSNTSYCELCHTEFAVEKRSRS 123

Query: 82  KKPQRGDPG 91
                 DPG
Sbjct: 124 LTEWLKDPG 130

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BLAST of Csor.00g149990 vs. ExPASy Swiss-Prot
Match: Q0P496 (E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 25/78 (32.05%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 22  CRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTEKGSTVCEICLQNYEPGYTSPS 81
           CRIC +   +   +L +PC CSG+++  H  C+ +W +E+GS  CE+C   Y+    S  
Sbjct: 143 CRICFQGPEQG--ELLSPCRCSGSVRCTHEPCLIKWISERGSWSCELCYYKYQVIAISTK 202

Query: 82  KKPQRGDPGVTIRDSLQI 100
              Q     +T+ + +QI
Sbjct: 203 NPLQWQAISLTVIEKVQI 218

[Close]

BLAST of Csor.00g149990 vs. ExPASy Swiss-Prot
Match: Q86YJ5 (E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 25/79 (31.65%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 21  RCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTEKGSTVCEICLQNYEPGYTSP 80
           +CRIC +   +   +L +PC C G+++  H+ C+ RW +E+GS  CE+C   Y+    S 
Sbjct: 109 QCRICFQGPEQG--ELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAIST 168

Query: 81  SKKPQRGDPGVTIRDSLQI 100
               Q     +T+ + +QI
Sbjct: 169 KNPLQWQAISLTVIEKVQI 185

[Close]

BLAST of Csor.00g149990 vs. ExPASy Swiss-Prot
Match: Q3TZ87 (E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 25/79 (31.65%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 21  RCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTEKGSTVCEICLQNYEPGYTSP 80
           +CRIC +   +   +L +PC C G+++  H+ C+ RW +E+GS  CE+C   Y+    S 
Sbjct: 109 QCRICFQGPEQG--ELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAIST 168

Query: 81  SKKPQRGDPGVTIRDSLQI 100
               Q     +T+ + +QI
Sbjct: 169 KNPLQWQAISLTVIEKVQI 185

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BLAST of Csor.00g149990 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 25/67 (37.31%), Postives = 37/67 (55.22%), Query Frame = 0


Query: 22  CRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTEKGSTVCEICLQ--NYEPGY-- 81
           CRIC     +    L  PC+CSG+IKF H+DC+ +W     +  CE+C    ++ P Y  
Sbjct: 68  CRICRNPG-DADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAD 127

Query: 82  TSPSKKP 85
            +PS+ P
Sbjct: 128 NAPSRLP 133

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BLAST of Csor.00g149990 vs. NCBI nr
Match: KAG6581297.1 (putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453 bits (1166), Expect = 1.27e-160
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
           DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP
Sbjct: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231
           MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV
Sbjct: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231

[Close]

BLAST of Csor.00g149990 vs. NCBI nr
Match: XP_022935183.1 (uncharacterized protein LOC111442137 [Cucurbita moschata])

HSP 1 Score: 451 bits (1159), Expect = 1.48e-159
Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MG+VSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGQVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
           DSTCSTT DRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP
Sbjct: 121 DSTCSTTTDRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231
           MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV
Sbjct: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231

[Close]

BLAST of Csor.00g149990 vs. NCBI nr
Match: KAG7018017.1 (putative E3 ubiquitin ligase SUD1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 445 bits (1144), Expect = 3.70e-157
Identity = 230/238 (96.64%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATV-------LILR 180
           DSTCSTT DRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATV       LILR
Sbjct: 121 DSTCSTTTDRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVSTRFYSVLILR 180

Query: 181 ASGIIFPMYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231
           ASGIIFPMYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV
Sbjct: 181 ASGIIFPMYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 238

[Close]

BLAST of Csor.00g149990 vs. NCBI nr
Match: XP_023529121.1 (uncharacterized protein LOC111791855 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441 bits (1134), Expect = 9.60e-156
Identity = 224/231 (96.97%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
           DSTCSTTADRGASCCKSVALTFTLMLL RHFYEVVTIDTAQYPFTLATVLILR SGIIFP
Sbjct: 121 DSTCSTTADRGASCCKSVALTFTLMLLVRHFYEVVTIDTAQYPFTLATVLILRVSGIIFP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231
           MYVIIRTI+ IQNSAR+NRYRYQNEEESDVDSDDDD S FEEDDRRVHHIV
Sbjct: 181 MYVIIRTITAIQNSARRNRYRYQNEEESDVDSDDDDRSSFEEDDRRVHHIV 231

[Close]

BLAST of Csor.00g149990 vs. NCBI nr
Match: XP_022984069.1 (uncharacterized protein LOC111482490 [Cucurbita maxima] >XP_022984070.1 uncharacterized protein LOC111482490 [Cucurbita maxima])

HSP 1 Score: 419 bits (1076), Expect = 6.90e-147
Identity = 212/232 (91.38%), Postives = 221/232 (95.26%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MGEVSLYVEEFQ QTSYQVSRCRICHEDE ETALQLEAPCSCSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEVSLYVEEFQLQTSYQVSRCRICHEDEFETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPR+EEEEAAEP SPPADGGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRSEEEEAAEPTSPPADGGAS 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
           DSTCSTTADRGASCCKSVALTFTLMLL RHFYEV+TIDTAQYPFTLATVLILRASGIIFP
Sbjct: 121 DSTCSTTADRGASCCKSVALTFTLMLLVRHFYEVITIDTAQYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSD-DDDISRFEEDDRRVHHIV 231
           MYVIIRTI+ IQNSAR+NRY+Y++E+E + D D DDDIS FEEDDRR HHIV
Sbjct: 181 MYVIIRTITAIQNSARRNRYQYEDEDEEESDGDSDDDISSFEEDDRRAHHIV 232

[Close]

BLAST of Csor.00g149990 vs. ExPASy TrEMBL
Match: A0A6J1F9U4 (uncharacterized protein LOC111442137 OS=Cucurbita moschata OX=3662 GN=LOC111442137 PE=4 SV=1)

HSP 1 Score: 451 bits (1159), Expect = 7.17e-160
Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MG+VSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGQVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
           DSTCSTT DRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP
Sbjct: 121 DSTCSTTTDRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231
           MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV
Sbjct: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231

[Close]

BLAST of Csor.00g149990 vs. ExPASy TrEMBL
Match: A0A6J1J7P0 (uncharacterized protein LOC111482490 OS=Cucurbita maxima OX=3661 GN=LOC111482490 PE=4 SV=1)

HSP 1 Score: 419 bits (1076), Expect = 3.34e-147
Identity = 212/232 (91.38%), Postives = 221/232 (95.26%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MGEVSLYVEEFQ QTSYQVSRCRICHEDE ETALQLEAPCSCSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEVSLYVEEFQLQTSYQVSRCRICHEDEFETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPR+EEEEAAEP SPPADGGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRSEEEEAAEPTSPPADGGAS 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
           DSTCSTTADRGASCCKSVALTFTLMLL RHFYEV+TIDTAQYPFTLATVLILRASGIIFP
Sbjct: 121 DSTCSTTADRGASCCKSVALTFTLMLLVRHFYEVITIDTAQYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSD-DDDISRFEEDDRRVHHIV 231
           MYVIIRTI+ IQNSAR+NRY+Y++E+E + D D DDDIS FEEDDRR HHIV
Sbjct: 181 MYVIIRTITAIQNSARRNRYQYEDEDEEESDGDSDDDISSFEEDDRRAHHIV 232

[Close]

BLAST of Csor.00g149990 vs. ExPASy TrEMBL
Match: A0A0A0KT99 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003640 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 2.28e-122
Identity = 179/232 (77.16%), Postives = 199/232 (85.78%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           M EV +YVEEF FQTSY VSRCRICHE+E E+ LQLEAPCSCSGTIKFAHRDCIQRWC+E
Sbjct: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDP-GVTIRDSLQIPRNEEEEAAEPASPPADGGA 120
           KGSTVCEICLQNYEPGYT+PSKKP   DP  VT+RD ++IPR+E+EE AEPAS P D  A
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120

Query: 121 SDSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIF 180
           S S CSTTADRGASCCKSVALTFTL+LL RHFY+VV + TA YPFTLATVLILRASGIIF
Sbjct: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180

Query: 181 PMYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231
           PMYVIIRT++ IQNS R+NRY+Y+     D D DDDDIS FE+DDRR+HHIV
Sbjct: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 232

[Close]

BLAST of Csor.00g149990 vs. ExPASy TrEMBL
Match: A0A6J1KFW1 (uncharacterized protein LOC111492856 OS=Cucurbita maxima OX=3661 GN=LOC111492856 PE=4 SV=1)

HSP 1 Score: 355 bits (911), Expect = 4.28e-122
Identity = 175/231 (75.76%), Postives = 204/231 (88.31%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MGE  LYV++F+F+TSY VSRCRICHE+E E+ALQLEAPC+CSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KGSTVCEICLQNYEPGYT+PSKKPQ GDPGV+I D +QIPR+E+EEAAEPASPPAD GAS
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGVQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
           DS CSTT DRGAS CKSVALTFTL+LL RHFY+V+ +    YPFTLATVL+LRASGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231
           MYVIIR I+ +Q + R++RYRY+  ++ D D +DDDIS FE+D+RR+HHIV
Sbjct: 181 MYVIIRAITTVQYNIRRSRYRYRYRDQ-DSDDEDDDISSFEDDERRLHHIV 230

[Close]

BLAST of Csor.00g149990 vs. ExPASy TrEMBL
Match: A0A1S4DZR9 (uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=4 SV=1)

HSP 1 Score: 354 bits (909), Expect = 9.94e-122
Identity = 181/234 (77.35%), Postives = 201/234 (85.90%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           M EV +YVEEF+FQTSY VSRCRICHE+E E+ LQLEAPCSCSGTIKFAHRDCIQRWC+E
Sbjct: 1   MEEVFVYVEEFRFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KGSTVCEICLQNYEPGYT+PSKKP   D GVTIRD ++IPR+E+EEAAEPASP    GAS
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHTDQGVTIRDGVEIPRSEDEEAAEPASPRDGDGAS 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
            S CSTTA+RGASCCKSVALTFTL+LL RHFY+VV + T +YPFTLATVLILRASGIIFP
Sbjct: 121 LSACSTTANRGASCCKSVALTFTLVLLVRHFYDVVAVGTDEYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDD---DISRFEEDDRRVHHIV 231
           MYVIIRTI+ IQNS R+NRY+YQ     D D DDD   DIS FE+DDRR+HHIV
Sbjct: 181 MYVIIRTITAIQNSVRRNRYQYQYRNHEDFDDDDDEEDDISSFEDDDRRLHHIV 234

[Close]

BLAST of Csor.00g149990 vs. TAIR 10
Match: AT1G02610.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 191.4 bits (485), Expect = 7.9e-49
Identity = 109/228 (47.81%), Postives = 152/228 (66.67%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MG+V L+++E   ++S+  +RCRICHE+E E+    EAPCSCSGTIKFAHRDCIQRWC E
Sbjct: 1   MGDVVLFIDETYLKSSF--NRCRICHEEEAES--YFEAPCSCSGTIKFAHRDCIQRWCDE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KG+T+CEICLQ Y+PGYT+ SK  +  +  VTIRD+L I R E               + 
Sbjct: 61  KGNTICEICLQEYKPGYTTTSKPSRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREESD 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
              C++  DRGASCC+ +AL F+++LL +H ++ V   T +YP+T+ TVL L+A GI+ P
Sbjct: 121 FQECNSGVDRGASCCRYLALIFSVILLIKHAFDAV-YGTEEYPYTIFTVLTLKAIGILLP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVH 229
           M VIIRTI+ IQ S    RY+    EE  + S+++D    EE++++ H
Sbjct: 181 MLVIIRTITAIQRSL---RYQILESEEDTLSSEEED-HGLEEEEQQQH 219

[Close]

BLAST of Csor.00g149990 vs. TAIR 10
Match: AT4G02075.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44
Identity = 102/230 (44.35%), Postives = 150/230 (65.22%), Query Frame = 0


Query: 1   MGEVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60
           MG+V L++++   ++  +++RCRICHE+E E+    E PC+CSGT+KFAHR+CIQRWC E
Sbjct: 1   MGDVILFIDD--TKSKVRITRCRICHEEEEESF--FEVPCACSGTVKFAHRNCIQRWCNE 60

Query: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120
           KG+T CEICLQ Y+ GYT+  K+ +  +  VTIR + +  R      +   S        
Sbjct: 61  KGNTTCEICLQVYKDGYTAVLKQSKLIEQEVTIRVNGRRRRRSRRLVSIAES-------D 120

Query: 121 DSTCSTTADRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180
            S C++ ADRGAS C+S+  T ++ LL +H ++V+   T +YPF++ TVL L+A GI+ P
Sbjct: 121 ISQCNSVADRGASFCRSLTFTLSVFLLMKHTFDVI-YGTEEYPFSVFTVLTLKAIGILLP 180

Query: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHI 231
           M++IIRTIS IQ + R+ R++Y   EE D  S DDD    EED+ +  H+
Sbjct: 181 MFIIIRTISTIQKTLRR-RHQYPESEEEDRLSSDDDDDLEEEDEEQQQHL 217

[Close]

BLAST of Csor.00g149990 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-27
Identity = 68/197 (34.52%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 19  VSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTEKGSTVCEICLQNYEPGYT 78
           ++ CRICH+++L++   +E PCSCSG++K+AHR C+QRWC EKG T CEIC Q ++P YT
Sbjct: 56  MAECRICHDEDLDS--NMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 115

Query: 79  SPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGASDSTCSTTADRGASCCKSV 138
           +P    + G   +  R +  I + E          PAD    D     ++     CC+S+
Sbjct: 116 APPPLLELGHVPLHFRGNWGISQREHRFI---TVVPADSTFIDQPYPLSSTTSFICCRSL 175

Query: 139 ALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFPMYVIIRTISVIQNSARQN 198
            L F  +L+ RH   +V   +  + F L T+L LR  GI+ P+YV+ + ++  +  +R  
Sbjct: 176 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRT- 235

Query: 199 RYRYQNEEESDVDSDDD 216
                +   SD  SD++
Sbjct: 236 ----LDTSPSDDSSDEE 242

[Close]

BLAST of Csor.00g149990 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-27
Identity = 68/197 (34.52%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 19  VSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTEKGSTVCEICLQNYEPGYT 78
           ++ CRICH+++L++   +E PCSCSG++K+AHR C+QRWC EKG T CEIC Q ++P YT
Sbjct: 56  MAECRICHDEDLDS--NMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 115

Query: 79  SPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGASDSTCSTTADRGASCCKSV 138
           +P    + G   +  R +  I + E          PAD    D     ++     CC+S+
Sbjct: 116 APPPLLELGHVPLHFRGNWGISQREHRFI---TVVPADSTFIDQPYPLSSTTSFICCRSL 175

Query: 139 ALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFPMYVIIRTISVIQNSARQN 198
            L F  +L+ RH   +V   +  + F L T+L LR  GI+ P+YV+ + ++  +  +R  
Sbjct: 176 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRT- 235

Query: 199 RYRYQNEEESDVDSDDD 216
                +   SD  SD++
Sbjct: 236 ----LDTSPSDDSSDEE 242

[Close]

BLAST of Csor.00g149990 vs. TAIR 10
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 3.0e-24
Identity = 65/181 (35.91%), Postives = 97/181 (53.59%), Query Frame = 0


Query: 18  QVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTEKGSTVCEICLQNYEPGY 77
           Q   CRIC E+  ++   LE+PCSCSG++K+AHR C+QRWC EKG T CEIC ++Y+PGY
Sbjct: 74  QSVECRICQEE--DSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPGY 133

Query: 78  TSPSKKPQRG---DPGVTIRDSLQIPRNEEEEAAEPASPPADGGASDSTCSTTADRGASC 137
           T+P   P      D G    + + +  N+    A  A+      A     + +   GA+ 
Sbjct: 134 TAPPPPPADDTIIDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSGAAF 193

Query: 138 CKSVALTFTLMLLARHFYEVV---TIDTAQYPFTLATVLILRASGIIFPMYVIIRTISVI 193
           C+S AL    +LL RH   +    + D    P     + +LRA+G + P Y++   IS++
Sbjct: 194 CRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMAWAISIL 252

The following BLAST results are available for this feature:

BLAST of Csor.00g149990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32L65	7.3e-07	36.23	E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1	[more]
Q0P496	1.2e-06	32.05	E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1	[more]
Q86YJ5	1.6e-06	31.65	E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2	[more]
Q3TZ87	1.6e-06	31.65	E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=...	[more]
F4JKK0	2.8e-06	37.31	Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 S...	[more]

BLAST of Csor.00g149990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581297.1	1.27e-160	100.00	putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935183.1	1.48e-159	99.13	uncharacterized protein LOC111442137 [Cucurbita moschata]	[more]
KAG7018017.1	3.70e-157	96.64	putative E3 ubiquitin ligase SUD1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023529121.1	9.60e-156	96.97	uncharacterized protein LOC111791855 [Cucurbita pepo subsp. pepo]	[more]
XP_022984069.1	6.90e-147	91.38	uncharacterized protein LOC111482490 [Cucurbita maxima] >XP_022984070.1 uncharac...	[more]

BLAST of Csor.00g149990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9U4	7.17e-160	99.13	uncharacterized protein LOC111442137 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]
A0A6J1J7P0	3.34e-147	91.38	uncharacterized protein LOC111482490 OS=Cucurbita maxima OX=3661 GN=LOC111482490...	[more]
A0A0A0KT99	2.28e-122	77.16	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G00364...	[more]
A0A6J1KFW1	4.28e-122	75.76	uncharacterized protein LOC111492856 OS=Cucurbita maxima OX=3661 GN=LOC111492856...	[more]
A0A1S4DZR9	9.94e-122	77.35	uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=...	[more]

BLAST of Csor.00g149990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02610.1	7.9e-49	47.81	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT4G02075.1	1.2e-44	44.35	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.1	5.0e-27	34.52	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.2	5.0e-27	34.52	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G62460.1	3.0e-24	35.91	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 21..70 e-value: 6.2E-18 score: 75.6
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 22..69 e-value: 2.6E-13 score: 49.9
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 14..76 score: 20.123234
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 75..188 e-value: 4.1E-28 score: 98.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 9..80 e-value: 1.6E-18 score: 68.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..124
None	No IPR available	PANTHER	PTHR23012:SF180	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 1..203
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 22..69 e-value: 2.46164E-17 score: 71.2044
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 18..74
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g149990.m01	Csor.00g149990.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding