Csor.00g149520 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g149520
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	E3 ubiquitin-protein ligase ATL41-like
Location	Csor_Chr14: 5274031 .. 5274771 (-)
RNA-Seq Expression	Csor.00g149520
Synteny	Csor.00g149520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCGACGACGAAGATCATCACTTACGGAAGTTCCAATCCCGCCACAAGATCATGATCTCTGCAATTTTCAGTCTATTCGTCGTCGTTTTGGTCATCCTCTTCCTCCATTTTTATCTCAGATATCTCCACAGGCGCCGAAGGCAATCCAGATTAATTAATCTCGAACACCAGATTTCACGGGCCGATCGCCAAAATCACACGGCGGCGACGGCGGCGGAGACGGCACCGGCGCCTAAGGCCGGCCTGGACCCTGTTCTTATAGCCAAACTTCTGCAGGAATCTATCCACAAGCAAGCCGATCATCACGGTGAAATTGTGGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTCAGGATTCTCCCCAATTGCAAGCACATATTCCATGTGGAGTGCATCGATATGTGGCTTTTTTCCAACACAACCTGCCCTGTCTGCCGGACGGCGGTGGAGCCAATAGTTACAGCCACCGAGCACGGCGAGGCTCCGACGGCTCCGCCGTTAGAGGAAGAGCAATCCGGGTCTAGGTTCAGCTCGTTTAGAAGGACAATGAGCAGAGAACGGTCTCAGACAGTTCAGCCGACGGCTCCGCCATTGACGGAGGAGCAATCGAGCTCGCGGCTGAGCTCTTTTAGAAGAATGATGAGCAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGGTTCGGTTCGACCAGCAGACATGGAGAGGCAATGA

mRNA sequence

ATGGGTTCCGACGACGAAGATCATCACTTACGGAAGTTCCAATCCCGCCACAAGATCATGATCTCTGCAATTTTCAGTCTATTCGTCGTCGTTTTGGTCATCCTCTTCCTCCATTTTTATCTCAGATATCTCCACAGGCGCCGAAGGCAATCCAGATTAATTAATCTCGAACACCAGATTTCACGGGCCGATCGCCAAAATCACACGGCGGCGACGGCGGCGGAGACGGCACCGGCGCCTAAGGCCGGCCTGGACCCTGTTCTTATAGCCAAACTTCTGCAGGAATCTATCCACAAGCAAGCCGATCATCACGGTGAAATTGTGGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTCAGGATTCTCCCCAATTGCAAGCACATATTCCATGTGGAGTGCATCGATATGTGGCTTTTTTCCAACACAACCTGCCCTGTCTGCCGGACGGCGGTGGAGCCAATAGTTACAGCCACCGAGCACGGCGAGGCTCCGACGGCTCCGCCGTTAGAGGAAGAGCAATCCGGGTCTAGGTTCAGCTCGTTTAGAAGGACAATGAGCAGAGAACGGTCTCAGACAGTTCAGCCGACGGCTCCGCCATTGACGGAGGAGCAATCGAGCTCGCGGCTGAGCTCTTTTAGAAGAATGATGAGCAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGGTTCGGTTCGACCAGCAGACATGGAGAGGCAATGA

Coding sequence (CDS)

ATGGGTTCCGACGACGAAGATCATCACTTACGGAAGTTCCAATCCCGCCACAAGATCATGATCTCTGCAATTTTCAGTCTATTCGTCGTCGTTTTGGTCATCCTCTTCCTCCATTTTTATCTCAGATATCTCCACAGGCGCCGAAGGCAATCCAGATTAATTAATCTCGAACACCAGATTTCACGGGCCGATCGCCAAAATCACACGGCGGCGACGGCGGCGGAGACGGCACCGGCGCCTAAGGCCGGCCTGGACCCTGTTCTTATAGCCAAACTTCTGCAGGAATCTATCCACAAGCAAGCCGATCATCACGGTGAAATTGTGGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTCAGGATTCTCCCCAATTGCAAGCACATATTCCATGTGGAGTGCATCGATATGTGGCTTTTTTCCAACACAACCTGCCCTGTCTGCCGGACGGCGGTGGAGCCAATAGTTACAGCCACCGAGCACGGCGAGGCTCCGACGGCTCCGCCGTTAGAGGAAGAGCAATCCGGGTCTAGGTTCAGCTCGTTTAGAAGGACAATGAGCAGAGAACGGTCTCAGACAGTTCAGCCGACGGCTCCGCCATTGACGGAGGAGCAATCGAGCTCGCGGCTGAGCTCTTTTAGAAGAATGATGAGCAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGGTTCGGTTCGACCAGCAGACATGGAGAGGCAATGA

Protein sequence

MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGSRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRPADMERQ

Homology

[Close]

BLAST of Csor.00g149520 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.2e-25
Identity = 89/262 (33.97%), Postives = 128/262 (48.85%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRH--------------KIMISAIFSLFVVVLVILFLHFYLRYLHR 60
           M S+D DH  R+F S H              KIM++A+ SL  V+L++  LH Y R++ R
Sbjct: 1   MSSNDRDH--RRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLR 60

Query: 61  RRRQSRLINLEHQISRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGE 120
           RRR++                            PK GL+P +IA L   ++         
Sbjct: 61  RRREA--------------FRGLPVIFRHPFEMPKRGLNPTVIASLPTFTVGATDGVAAS 120

Query: 121 IVECSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP---IVTATE 180
             EC++CLS ++E+   R LPNCKHIFHV+C+D WL + +TCPVCRT VEP   +     
Sbjct: 121 ATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPR 180

Query: 181 HGEAPTAPPLEEEQSGSRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRD 240
            G   TAP L  E   +       + S +    V P          +SRL+SFR++++R+
Sbjct: 181 EGPVGTAPQLLVETRLNLTVEAASSSSSDNKTVVSP----------ASRLNSFRKILTRE 235

Query: 241 RERSFRVHSCGEGSVRPADMER 246
           R  +   HSC +   R AD+ER
Sbjct: 241 RSSNRINHSCPDQD-RVADLER 235

[Close]

BLAST of Csor.00g149520 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 3.3e-21
Identity = 88/244 (36.07%), Postives = 122/244 (50.00%), Query Frame = 0


Query: 18  KIMISAIFSLFVVVLVILFLHFYLR-YLHRRRRQSRLINLEHQISRADRQNHTA-ATAAE 77
           KIM+SAI  LF VV++++FLH Y R YL R RR  R +    +  RA     TA  + A 
Sbjct: 29  KIMLSAIVILFFVVILMVFLHLYARWYLLRARR--RHLRRRSRNRRATMVFFTADPSTAA 88

Query: 78  TAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHV 137
           T+     GLDP +I  L   +   +   H + +EC++CLS  EE  T R+LPNC+H FHV
Sbjct: 89  TSVVASRGLDPNVIKSLPVFTFSDET--HKDPIECAVCLSEFEESETGRVLPNCQHTFHV 148

Query: 138 ECIDMWLFSNTTCPVCRTAVE--------------PIVTATEHG-----EAPTAPPLEEE 197
           +CIDMW  S++TCP+CR+ VE               +V A +       E  ++  L +E
Sbjct: 149 DCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTDE 208

Query: 198 QSGSRFSSF---------------RRTMSRERSQTVQPTAPPLTEEQS-SSRLSSFRRMM 225
             GS  S                 RRT S    +  +  +P     +S  SR+ SF RM+
Sbjct: 209 PHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSRMLSFTRML 268

[Close]

BLAST of Csor.00g149520 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.5e-21
Identity = 66/202 (32.67%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 7   DHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQ 66
           +H   ++    KIM++++  LFV V++IL  H Y R+L RR+ +     +  +IS A  +
Sbjct: 16  NHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNR----RIRRRIS-AHLR 75

Query: 67  NHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKATVRIL 126
           +  AA     + +  + LDP ++ K +   ++    H   + ECS+CLS  EE    R+L
Sbjct: 76  SLAAARDPTQSSSSLSPLDPTVLEK-IPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVL 135

Query: 127 PNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEA----PTAPPLEEEQSGSRF 186
           P C H+FHV+CID W  S ++CP+CR  V+P    TE        P+  P+E+ ++GS  
Sbjct: 136 PKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSS 195

Query: 187 SSFRRTMSRERSQTVQPTAPPL 205
           SS     S   S +  P   P+
Sbjct: 196 SSDESESSTPSSSSGSPVRFPM 211

[Close]

BLAST of Csor.00g149520 vs. ExPASy Swiss-Prot
Match: Q9SLC4 (RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-19
Identity = 83/255 (32.55%), Postives = 119/255 (46.67%), Query Frame = 0


Query: 3   SDDED--HHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRY-LHRRRRQSRLINLEHQ 62
           SDD     +   + +  KI +    S  ++++++   + Y ++ LHRR   S   +L   
Sbjct: 10  SDDRSFWQNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRR---SAFQDLSFS 69

Query: 63  ISRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEE 122
           +                +  PK GLD ++IA L    +  + D  G   EC++CLS +EE
Sbjct: 70  V---------------VSQPPKRGLDSLVIASLPTFVVGIKNDVAG--TECAVCLSLLEE 129

Query: 123 KATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSG 182
           K   R+LPNCKH+FHV C+D WL + +TCPVCRT  E           P+ P LE E   
Sbjct: 130 KDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAE-----------PSHPRLEPE--- 189

Query: 183 SRFSSFRRTMSRERSQTVQPTAPPL--------TEEQSSSRLSSFRRMMSRDRERSFRVH 242
                        R   V   APPL        T   S SRL SFRR+++R+R  + R H
Sbjct: 190 ------------PREGPVGDFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNRRDH 217

Query: 243 SCGEGSVRPADMERQ 247
           S  +   R  D+ERQ
Sbjct: 250 SRVDQD-RELDIERQ 217

[Close]

BLAST of Csor.00g149520 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16
Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = 0


Query: 18  KIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQNHTAATAAETA 77
           KIM+S++  LFV V++IL  H Y R+L RR  +           R  R+  +       +
Sbjct: 27  KIMLSSVIVLFVAVIMILCFHSYARWLFRRHNR-----------RIRRRIRSHLRTLSAS 86

Query: 78  PAPKAGLDPVLIAKL-LQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHVE 137
           P  +A LD  ++ K+ +     K      E  ECS+CLS  EE+   R+LP C H FHV+
Sbjct: 87  PRDQA-LDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVD 146

Query: 138 CIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPL 174
           CID W  S +TCP+CR  V+P     E G + ++ PL
Sbjct: 147 CIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPL 171

[Close]

BLAST of Csor.00g149520 vs. NCBI nr
Match: KAG6581344.1 (E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479 bits (1234), Expect = 1.73e-170
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240

Query: 241 ADMERQ 246
           ADMERQ
Sbjct: 241 ADMERQ 246

[Close]

BLAST of Csor.00g149520 vs. NCBI nr
Match: KAG7034629.1 (E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 473 bits (1217), Expect = 6.75e-168
Identity = 243/246 (98.78%), Postives = 243/246 (98.78%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAA T PAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATAAATEPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQ GS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQYGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240

Query: 241 ADMERQ 246
           ADMERQ
Sbjct: 241 ADMERQ 246

[Close]

BLAST of Csor.00g149520 vs. NCBI nr
Match: XP_022925918.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita moschata])

HSP 1 Score: 468 bits (1203), Expect = 9.20e-166
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAA TAPAPKAGLDPVLIAKLLQESIH+QADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATAAATAPAPKAGLDPVLIAKLLQESIHEQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATE GE PTAPPLEEEQSGS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEDGETPTAPPLEEEQSGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVH CGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHRCGEGSVRP 240

Query: 241 ADMERQ 246
           AD+ERQ
Sbjct: 241 ADLERQ 246

[Close]

BLAST of Csor.00g149520 vs. NCBI nr
Match: XP_022978748.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima])

HSP 1 Score: 468 bits (1204), Expect = 9.66e-166
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKI+ISAIFSL VVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 12  MGSDDEDHHLRKFQSRHKILISAIFSLLVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 71

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAA TAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 72  SRADRQNHTAATAAGTAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 131

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP VTATEHGEAPTAPPLEEEQSG 
Sbjct: 132 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPTVTATEHGEAPTAPPLEEEQSGF 191

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 192 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 251

Query: 241 ADMERQ 246
           AD+ERQ
Sbjct: 252 ADLERQ 257

[Close]

BLAST of Csor.00g149520 vs. NCBI nr
Match: XP_023544672.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464 bits (1195), Expect = 1.32e-164
Identity = 240/246 (97.56%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQ+RHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQARHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATA    PAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATA----PAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRT VEPIVTATEHGEAPTAPPLEEEQSGS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTGVEPIVTATEHGEAPTAPPLEEEQSGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240

Query: 241 ADMERQ 246
           ADMERQ
Sbjct: 241 ADMERQ 242

[Close]

BLAST of Csor.00g149520 vs. ExPASy TrEMBL
Match: A0A6J1EGK8 (E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita moschata OX=3662 GN=LOC111433191 PE=4 SV=1)

HSP 1 Score: 468 bits (1203), Expect = 4.45e-166
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAA TAPAPKAGLDPVLIAKLLQESIH+QADHHGEIVECSICLSNIEEK
Sbjct: 61  SRADRQNHTAATAAATAPAPKAGLDPVLIAKLLQESIHEQADHHGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATE GE PTAPPLEEEQSGS
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEDGETPTAPPLEEEQSGS 180

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVH CGEGSVRP
Sbjct: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHRCGEGSVRP 240

Query: 241 ADMERQ 246
           AD+ERQ
Sbjct: 241 ADLERQ 246

[Close]

BLAST of Csor.00g149520 vs. ExPASy TrEMBL
Match: A0A6J1IU63 (E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita maxima OX=3661 GN=LOC111478612 PE=4 SV=1)

HSP 1 Score: 468 bits (1204), Expect = 4.68e-166
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKFQSRHKI+ISAIFSL VVVLVILFLHFYLRYLHRRRRQSRLINLEHQI
Sbjct: 12  MGSDDEDHHLRKFQSRHKILISAIFSLLVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 71

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRADRQNHTAATAA TAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK
Sbjct: 72  SRADRQNHTAATAAGTAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 131

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSGS 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP VTATEHGEAPTAPPLEEEQSG 
Sbjct: 132 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPTVTATEHGEAPTAPPLEEEQSGF 191

Query: 181 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 240
           RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP
Sbjct: 192 RFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVRP 251

Query: 241 ADMERQ 246
           AD+ERQ
Sbjct: 252 ADLERQ 257

[Close]

BLAST of Csor.00g149520 vs. ExPASy TrEMBL
Match: A0A5D3CQ84 (E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007960 PE=4 SV=1)

HSP 1 Score: 405 bits (1040), Expect = 2.97e-141
Identity = 213/247 (86.23%), Postives = 225/247 (91.09%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKF +RHK+M+SAIFSLF+VV++ILFLHFYLRYL RRRRQSRLINLE QI
Sbjct: 1   MGSDDEDHHLRKFGTRHKVMVSAIFSLFIVVIIILFLHFYLRYLQRRRRQSRLINLEQQI 60

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRA+RQ HTA+  A TAP PKAGLDP+LIA++L ESI KQADH GEIVECSICLSNIEEK
Sbjct: 61  SRAERQIHTASATA-TAP-PKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV-TATEHGEAPTAPPLEEEQSG 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV  ATEHGE PTAPPL EEQSG
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSG 180

Query: 181 SRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVR 240
           SR SSFRRTMSRERSQTV  TAPPLTEEQ SSRLSSFRRMMSRDRERSFRVHSCGE SVR
Sbjct: 181 SRLSSFRRTMSRERSQTVHATAPPLTEEQPSSRLSSFRRMMSRDRERSFRVHSCGEASVR 240

Query: 241 PADMERQ 246
             D+ERQ
Sbjct: 241 SGDLERQ 245

[Close]

BLAST of Csor.00g149520 vs. ExPASy TrEMBL
Match: A0A1S3B099 (E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo OX=3656 GN=LOC103484472 PE=4 SV=1)

HSP 1 Score: 405 bits (1040), Expect = 2.97e-141
Identity = 213/247 (86.23%), Postives = 225/247 (91.09%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKF +RHK+M+SAIFSLF+VV++ILFLHFYLRYL RRRRQSRLINLE QI
Sbjct: 1   MGSDDEDHHLRKFGTRHKVMVSAIFSLFIVVIIILFLHFYLRYLQRRRRQSRLINLEQQI 60

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRA+RQ HTA+  A TAP PKAGLDP+LIA++L ESI KQADH GEIVECSICLSNIEEK
Sbjct: 61  SRAERQIHTASATA-TAP-PKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV-TATEHGEAPTAPPLEEEQSG 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV  ATEHGE PTAPPL EEQSG
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSG 180

Query: 181 SRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVR 240
           SR SSFRRTMSRERSQTV  TAPPLTEEQ SSRLSSFRRMMSRDRERSFRVHSCGE SVR
Sbjct: 181 SRLSSFRRTMSRERSQTVHATAPPLTEEQPSSRLSSFRRMMSRDRERSFRVHSCGEASVR 240

Query: 241 PADMERQ 246
             D+ERQ
Sbjct: 241 SGDLERQ 245

[Close]

BLAST of Csor.00g149520 vs. ExPASy TrEMBL
Match: A0A5A7UA65 (E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G002520 PE=4 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 1.41e-139
Identity = 211/247 (85.43%), Postives = 223/247 (90.28%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQI 60
           MGSDDEDHHLRKF +RHK+M+SAIFSLF+VV++ILFLHFYLRYL RRRRQSRLINLE QI
Sbjct: 1   MGSDDEDHHLRKFGTRHKVMVSAIFSLFIVVIIILFLHFYLRYLQRRRRQSRLINLEQQI 60

Query: 61  SRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 120
           SRA+RQ HTA+  A TAP PK GLDP+LIA++L ESI KQADH GEIVECSICLSNIEEK
Sbjct: 61  SRAERQIHTASATA-TAP-PKVGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEK 120

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV-TATEHGEAPTAPPLEEEQSG 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIV  ATEHGE PTAPPL EEQSG
Sbjct: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSG 180

Query: 181 SRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRDRERSFRVHSCGEGSVR 240
           SR SSFRRTMSRERSQTV  TAPPLTEEQ SSRLSSFRRMMSRDRERSF VHSCGE SVR
Sbjct: 181 SRLSSFRRTMSRERSQTVHATAPPLTEEQPSSRLSSFRRMMSRDRERSFGVHSCGEASVR 240

Query: 241 PADMERQ 246
             D+ERQ
Sbjct: 241 SGDLERQ 245

[Close]

BLAST of Csor.00g149520 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26
Identity = 89/262 (33.97%), Postives = 128/262 (48.85%), Query Frame = 0


Query: 1   MGSDDEDHHLRKFQSRH--------------KIMISAIFSLFVVVLVILFLHFYLRYLHR 60
           M S+D DH  R+F S H              KIM++A+ SL  V+L++  LH Y R++ R
Sbjct: 1   MSSNDRDH--RRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLR 60

Query: 61  RRRQSRLINLEHQISRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGE 120
           RRR++                            PK GL+P +IA L   ++         
Sbjct: 61  RRREA--------------FRGLPVIFRHPFEMPKRGLNPTVIASLPTFTVGATDGVAAS 120

Query: 121 IVECSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP---IVTATE 180
             EC++CLS ++E+   R LPNCKHIFHV+C+D WL + +TCPVCRT VEP   +     
Sbjct: 121 ATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPR 180

Query: 181 HGEAPTAPPLEEEQSGSRFSSFRRTMSRERSQTVQPTAPPLTEEQSSSRLSSFRRMMSRD 240
            G   TAP L  E   +       + S +    V P          +SRL+SFR++++R+
Sbjct: 181 EGPVGTAPQLLVETRLNLTVEAASSSSSDNKTVVSP----------ASRLNSFRKILTRE 235

Query: 241 RERSFRVHSCGEGSVRPADMER 246
           R  +   HSC +   R AD+ER
Sbjct: 241 RSSNRINHSCPDQD-RVADLER 235

[Close]

BLAST of Csor.00g149520 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-22
Identity = 88/244 (36.07%), Postives = 122/244 (50.00%), Query Frame = 0


Query: 18  KIMISAIFSLFVVVLVILFLHFYLR-YLHRRRRQSRLINLEHQISRADRQNHTA-ATAAE 77
           KIM+SAI  LF VV++++FLH Y R YL R RR  R +    +  RA     TA  + A 
Sbjct: 29  KIMLSAIVILFFVVILMVFLHLYARWYLLRARR--RHLRRRSRNRRATMVFFTADPSTAA 88

Query: 78  TAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHV 137
           T+     GLDP +I  L   +   +   H + +EC++CLS  EE  T R+LPNC+H FHV
Sbjct: 89  TSVVASRGLDPNVIKSLPVFTFSDET--HKDPIECAVCLSEFEESETGRVLPNCQHTFHV 148

Query: 138 ECIDMWLFSNTTCPVCRTAVE--------------PIVTATEHG-----EAPTAPPLEEE 197
           +CIDMW  S++TCP+CR+ VE               +V A +       E  ++  L +E
Sbjct: 149 DCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTDE 208

Query: 198 QSGSRFSSF---------------RRTMSRERSQTVQPTAPPLTEEQS-SSRLSSFRRMM 225
             GS  S                 RRT S    +  +  +P     +S  SR+ SF RM+
Sbjct: 209 PHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSRMLSFTRML 268

[Close]

BLAST of Csor.00g149520 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 102.8 bits (255), Expect = 3.9e-22
Identity = 66/202 (32.67%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 7   DHHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQ 66
           +H   ++    KIM++++  LFV V++IL  H Y R+L RR+ +     +  +IS A  +
Sbjct: 16  NHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNR----RIRRRIS-AHLR 75

Query: 67  NHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKATVRIL 126
           +  AA     + +  + LDP ++ K +   ++    H   + ECS+CLS  EE    R+L
Sbjct: 76  SLAAARDPTQSSSSLSPLDPTVLEK-IPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVL 135

Query: 127 PNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEA----PTAPPLEEEQSGSRF 186
           P C H+FHV+CID W  S ++CP+CR  V+P    TE        P+  P+E+ ++GS  
Sbjct: 136 PKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSS 195

Query: 187 SSFRRTMSRERSQTVQPTAPPL 205
           SS     S   S +  P   P+
Sbjct: 196 SSDESESSTPSSSSGSPVRFPM 211

[Close]

BLAST of Csor.00g149520 vs. TAIR 10
Match: AT2G42350.1 (RING/U-box superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 9.7e-21
Identity = 83/255 (32.55%), Postives = 119/255 (46.67%), Query Frame = 0


Query: 3   SDDED--HHLRKFQSRHKIMISAIFSLFVVVLVILFLHFYLRY-LHRRRRQSRLINLEHQ 62
           SDD     +   + +  KI +    S  ++++++   + Y ++ LHRR   S   +L   
Sbjct: 10  SDDRSFWQNSTSYDASSKIFLVTTVSFSIIIIIVFVYYLYAKFVLHRR---SAFQDLSFS 69

Query: 63  ISRADRQNHTAATAAETAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEE 122
           +                +  PK GLD ++IA L    +  + D  G   EC++CLS +EE
Sbjct: 70  V---------------VSQPPKRGLDSLVIASLPTFVVGIKNDVAG--TECAVCLSLLEE 129

Query: 123 KATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPLEEEQSG 182
           K   R+LPNCKH+FHV C+D WL + +TCPVCRT  E           P+ P LE E   
Sbjct: 130 KDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAE-----------PSHPRLEPE--- 189

Query: 183 SRFSSFRRTMSRERSQTVQPTAPPL--------TEEQSSSRLSSFRRMMSRDRERSFRVH 242
                        R   V   APPL        T   S SRL SFRR+++R+R  + R H
Sbjct: 190 ------------PREGPVGDFAPPLDFAGVDNKTGGSSVSRLDSFRRILTRERSSNRRDH 217

Query: 243 SCGEGSVRPADMERQ 247
           S  +   R  D+ERQ
Sbjct: 250 SRVDQD-RELDIERQ 217

[Close]

BLAST of Csor.00g149520 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17
Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = 0


Query: 18  KIMISAIFSLFVVVLVILFLHFYLRYLHRRRRQSRLINLEHQISRADRQNHTAATAAETA 77
           KIM+S++  LFV V++IL  H Y R+L RR  +           R  R+  +       +
Sbjct: 27  KIMLSSVIVLFVAVIMILCFHSYARWLFRRHNR-----------RIRRRIRSHLRTLSAS 86

Query: 78  PAPKAGLDPVLIAKL-LQESIHKQADHHGEIVECSICLSNIEEKATVRILPNCKHIFHVE 137
           P  +A LD  ++ K+ +     K      E  ECS+CLS  EE+   R+LP C H FHV+
Sbjct: 87  PRDQA-LDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVD 146

Query: 138 CIDMWLFSNTTCPVCRTAVEPIVTATEHGEAPTAPPL 174
           CID W  S +TCP+CR  V+P     E G + ++ PL
Sbjct: 147 CIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPL 171

The following BLAST results are available for this feature:

BLAST of Csor.00g149520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLC3	2.2e-25	33.97	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ...	[more]
Q8L9T5	3.3e-21	36.07	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LZJ6	5.5e-21	32.67	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q9SLC4	1.4e-19	32.55	RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1	[more]
O22255	2.4e-16	36.31	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]

BLAST of Csor.00g149520 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581344.1	1.73e-170	100.00	E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7034629.1	6.75e-168	98.78	E3 ubiquitin-protein ligase ATL41, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022925918.1	9.20e-166	97.56	E3 ubiquitin-protein ligase ATL41-like [Cucurbita moschata]	[more]
XP_022978748.1	9.66e-166	97.56	E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima]	[more]
XP_023544672.1	1.32e-164	97.56	E3 ubiquitin-protein ligase ATL41-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g149520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGK8	4.45e-166	97.56	E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IU63	4.68e-166	97.56	E3 ubiquitin-protein ligase ATL41-like OS=Cucurbita maxima OX=3661 GN=LOC1114786...	[more]
A0A5D3CQ84	2.97e-141	86.23	E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B099	2.97e-141	86.23	E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo OX=3656 GN=LOC103484472 P...	[more]
A0A5A7UA65	1.41e-139	85.43	E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Csor.00g149520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42360.1	1.5e-26	33.97	RING/U-box superfamily protein	[more]
AT3G16720.1	2.3e-22	36.07	TOXICOS EN LEVADURA 2	[more]
AT3G62690.1	3.9e-22	32.67	AtL5	[more]
AT2G42350.1	9.7e-21	32.55	RING/U-box superfamily protein	[more]
AT2G47560.1	1.7e-17	36.31	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 110..151 e-value: 1.4E-7 score: 41.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 109..152 e-value: 2.2E-13 score: 50.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 110..152 score: 12.84335
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 65..158 e-value: 2.3E-20 score: 74.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..246
None	No IPR available	PANTHER	PTHR14155:SF558	RING-H2 FINGER PROTEIN ATL40-LIKE	coord: 1..246
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..246
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 109..152 e-value: 4.17402E-16 score: 68.1055
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 109..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g149520.m01	Csor.00g149520.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane