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Csor.00g149050 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAAGAATTCCACGACTCCGACGTCATAATCGCCGACCACCGCCGCCTGTTCCACCCCTCCCTCGACTACGCCCACACCCAAATCCCCATCACAACTCATCGGAGCTCCAGAAACGACACCAACAGCAACAGCAAAGATTCCGCCGCCTCTCTCCCCGTCAAAATCCCAGAAACCGTTTACCGTTACAATTCCTCCGACATGGAGGAGGTGGACGAGGATTGGGACATTGACGACAACATCGTACCCCCGCACCTCATCATCGGTCGTCGCGTAGCCGGAAAAATGGCTTTCTCCCTCTGCACCGGCAACGGTAGGACGCTCAAAGGAAGAGATTTAAGCCAAGTTCGAAATTCTATTCTCAAAATGACCGGATTCCTGGAAACTTGACCCCAAATTACTCCAAATCAATATTTGTAAAGAAGATTAATCAAAAAAAGGGAACCCATTTTTTCTTTAGAATAATTCATCATGTTCTTATTTTTACTACGGGGGTTGTGTAAAATTTTCATGGGAAACATGAAGGAATGCATGTTCACAGATTGGGTGGAGGTTCTGAGCATTGTTTAATTTATGTTTGGCAGTGTTCTTAAACACAAATAATGTTCTTTCTTTAAACCATAACTGATTTTGGACTGTCCCAACATCACCACCTACGCTTTCACGAGATGTTTCATTATTGCCTTGTCTTTTTCTCCCAATAATTCAACACTTTTTTCTTCTTCTTCTTTTTTAATTCTATTATTATATATATATATATATATTAATTATCATGTTCTCATTATAATCCAAATTTTTAATGTTGGGTAGGACGTGATTGAAACCATACATATAATGTGACAAGAAAATATTAAATAACCTAATGTTTTAATTCCAAACATTATGTTTATTTGGTTCCAAAATTATTGAATAGAAAAACAAAAAAAGAATCGCTTAAAAACATCAATATTTTCTGACAACGAAGCCACGTGTAGAAATTGATCCGTCTTTCACTGCATGTGTAAAAAAAATGTTTGGAAAGTGTCAGACATTGAGATTAATGATGTCGCTTAGATCACGGTGACCGATTCTATTAACTATAGAGATTATAATATTTCTCTTTTAAGAAGACATACATAGATGTCTACGAGGATTGGAAAGGCTTCCACATTACCTATTTCATTCTCTATCTCAACAAAATTCTCTGTTTATATCTGCAGAAGACTGGAGCAAGATTCTCCACTGAAAATTTGCAGAGGGCGAGTTAACCAAAAATAATTTTTTTATGTTTATTATTATTTGTAAATATAATTATTCTAAAATTTTTCATTTTTCACTGCAATCTTTAATATATATATATTCACCCATTTTATTAACGTAATTTCTAAAAATTTTAATTTTAATATTTAAACATGGATTTCAAAATTAATTAATTTATTTTTAGTAGAGTCCAGAGATATTTATAGTAATATATATGTTTTTAATATTAAAAAAATGTAATTTAAAAAATATATAGTTTAATTTTTAGGAGGACTATATTGAACCAATAAATTTGAACTTTTAATTTCTAATTTCGTCCATTTGGGTTCCAAATTTAAATAAATTATACAAACTTCACTATGACAACATTAATTACACAAAAATGTTCTAATAATTCCATAATTGATTTTATAACGTCTTTAGCTCACAAATTATAAAATAAAACTTTTATTCTTTTTGTTTTCTATTTTTACTATAAAACGCTAAAAAAAAATGGCATAAATACGTAATCGCCACAAATTATGAACAAATTTACCTTTTTACGGAGTTACTAAATCTGGAACGTTCCACTATTACCACAGTAATTAATCCAAAAACACTATAAAACTACTTGGATTCATACACGGAAGAGATCAAGAACTCGAGGAAGAAAAGAAATAAGGCATTAGAATTGAAAGAATGAATTTTTTCAACAACTATTGCCTCATTTCTTGTCTCCTAGTGATAATGTCAATGATGGGTAATCCCGTTTCCGCGGGGTCAAAGACCATGCCGCCGCTTAGTCGATGGAAGGTCGTGATTTTTAATCAATTGAATCCCGGACAAACTTTATTAGCTCACTGTAAATCAAAGGACGATGATTTGGGTGATCATTTACTTCAAGTGGGTGAACAATACTCGTGGGAATTCAAAGAGAATGTCATCTCAACGACTCGTTTTTGGTGTACTTTCACAACGTCATTAAATAAACGTATCGTCATGGACGTGTTTTGGCCAGAGACTCATCGTTGGCTTGCTTATAGATGCAACGACTACTCTTGTGTTTGGGTTGCTCAAGATGATGGCATGTATTTGACCAACATTCCCGAGGGTAAAAGAGAGCTTGTGCGTAAATGGGATACCTAGACGAATGTGGACGGGAAATATTGTCATATTTAATTTCATGTACTCATCCCGTCTTATTATTAATAAAACTTTAAATTAACACCAAATGGGTGCTTTGGAGTTAACTTAAGCAAAACAGGGAAAGACCAAATAATTCATTTAACGTTAATATAAAGTAAATAAAATATTAAATATTTATTTATTTATTTATATATATATATGACCGAGGCAAAAAATTGGAGCGAAAACCCGGCATCTGTTAAGACAGGACAATGGGAATGGAAGGATAGTCTTCCCATAAACCCTAGACTTATCGCCTTCCTTCTCCCTCGTTTGCGCGGTTGTTTTCTTCGAGGGGGCTCTTCGCCCTCTCTCTTCGAATTATTCCAAGTCTCCGTTTCACGTCGTTCATCTGTTCTATCTATATAGGCTTCCGAAGCTCTCCAGTCGATCTGTGTAAGTTCTTTCTTTCTTTCTAACTTATTATTATCATCTCCGCCGTTGGGAGTGGGCTGGGGGTTCACTGAGATTCGAGGTGCTCTAGATTTTGATGCTGTCTTCTATTGATTTCACTCGACTCGATTTGACTAAACTTATAGATTTCGTCTGTTCTTCGTTTGATTTTGCCTATTCTGTTTCATTATTTCTTATCGCTTATAGATTTGAGGTCATGAGACCGATGTTTGATTATACCCTAATAACTTTTGCTTGAATTTGTTTGATTCTTTTTGATCTTTTATCTCTTGTTATTTTCATTTCGAGATTTTTCAACTTTCTTGTTGACAGCTTCTCCGAGAAACATCTGTGGATTCCGACTTTTTCTTGAAGTCGATAGTTTCAGCCCGTTCCATTCTTAGTAGATACTCTTTTTTGTTGAGCACGAAATTTCTTGTCTCTTTGTGTAAGTGCTTATGTTTCCACCGAACATTATAGATTTTCTGGAACGCGGTTTTTTATGCGGACATGTTCTATTATTATTTGTTGATACGTTATGGCGGCCCTTTCGTTTGGTCCCATGTTGGTGGGTTTATGAGATACTATAATATCACGTTGTTTTTTTGTTAGTCATTTAGTAGGTTTCGTGTCTCTTTTAAGACTGAACTTTATTTTCTATTCAGGCTCTCTGGAGGTTTAATTTCGAGATGAGTAGTTCTTACATCATTCCTCATCTGCTTGAGGGATGCCACTTTTCTGGTGTTCTTGGTTGCTTTTAA ATGGCCGAAGAATTCCACGACTCCGACGTCATAATCGCCGACCACCGCCGCCTGTTCCACCCCTCCCTCGACTACGCCCACACCCAAATCCCCATCACAACTCATCGGAGCTCCAGAAACGACACCAACAGCAACAGCAAAGATTCCGCCGCCTCTCTCCCCGTCAAAATCCCAGAAACCGTTTACCGTTACAATTCCTCCGACATGGAGGAGGTGGACGAGGATTGGGACATTGACGACAACATCGTACCCCCGCACCTCATCATCGGTCGTCGCGTAGCCGGAAAAATGGCTTTCTCCCTCTGCACCGGCAACGGTAGGACGCTCAAAGGAAGAGATTTAAGCCAAGCTTCCGAAGCTCTCCAGTCGATCTGTGCTCTCTGGAGGTTTAATTTCGAGATGAGTAGTTCTTACATCATTCCTCATCTGCTTGAGGGATGCCACTTTTCTGGTGTTCTTGGTTGCTTTTAA ATGGCCGAAGAATTCCACGACTCCGACGTCATAATCGCCGACCACCGCCGCCTGTTCCACCCCTCCCTCGACTACGCCCACACCCAAATCCCCATCACAACTCATCGGAGCTCCAGAAACGACACCAACAGCAACAGCAAAGATTCCGCCGCCTCTCTCCCCGTCAAAATCCCAGAAACCGTTTACCGTTACAATTCCTCCGACATGGAGGAGGTGGACGAGGATTGGGACATTGACGACAACATCGTACCCCCGCACCTCATCATCGGTCGTCGCGTAGCCGGAAAAATGGCTTTCTCCCTCTGCACCGGCAACGGTAGGACGCTCAAAGGAAGAGATTTAAGCCAAGCTTCCGAAGCTCTCCAGTCGATCTGTGCTCTCTGGAGGTTTAATTTCGAGATGAGTAGTTCTTACATCATTCCTCATCTGCTTGAGGGATGCCACTTTTCTGGTGTTCTTGGTTGCTTTTAA MAEEFHDSDVIIADHRRLFHPSLDYAHTQIPITTHRSSRNDTNSNSKDSAASLPVKIPETVYRYNSSDMEEVDEDWDIDDNIVPPHLIIGRRVAGKMAFSLCTGNGRTLKGRDLSQASEALQSICALWRFNFEMSSSYIIPHLLEGCHFSGVLGCF Homology
BLAST of Csor.00g149050 vs. NCBI nr
Match: KAG6581390.1 (hypothetical protein SDJN03_21392, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 321 bits (822), Expect = 1.18e-110 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Csor.00g149050 vs. NCBI nr
Match: XP_022925703.1 (uncharacterized protein LOC111433041 [Cucurbita moschata] >KAG7034675.1 hypothetical protein SDJN02_04405, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236 bits (602), Expect = 1.72e-77 Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Csor.00g149050 vs. NCBI nr
Match: XP_022977254.1 (uncharacterized protein LOC111477622 [Cucurbita maxima]) HSP 1 Score: 227 bits (578), Expect = 7.80e-74 Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0
BLAST of Csor.00g149050 vs. NCBI nr
Match: XP_023544879.1 (uncharacterized protein LOC111804348 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 224 bits (570), Expect = 1.38e-72 Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 0
BLAST of Csor.00g149050 vs. NCBI nr
Match: XP_038881487.1 (uncharacterized protein LOC120073009 [Benincasa hispida]) HSP 1 Score: 167 bits (424), Expect = 3.19e-50 Identity = 90/136 (66.18%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Csor.00g149050 vs. ExPASy TrEMBL
Match: A0A6J1EG03 (uncharacterized protein LOC111433041 OS=Cucurbita moschata OX=3662 GN=LOC111433041 PE=4 SV=1) HSP 1 Score: 236 bits (602), Expect = 8.30e-78 Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Csor.00g149050 vs. ExPASy TrEMBL
Match: A0A6J1IQW7 (uncharacterized protein LOC111477622 OS=Cucurbita maxima OX=3661 GN=LOC111477622 PE=4 SV=1) HSP 1 Score: 227 bits (578), Expect = 3.78e-74 Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0
BLAST of Csor.00g149050 vs. ExPASy TrEMBL
Match: A0A6J1KS02 (uncharacterized protein LOC111497106 OS=Cucurbita maxima OX=3661 GN=LOC111497106 PE=4 SV=1) HSP 1 Score: 156 bits (395), Expect = 2.47e-46 Identity = 80/123 (65.04%), Postives = 100/123 (81.30%), Query Frame = 0
BLAST of Csor.00g149050 vs. ExPASy TrEMBL
Match: A0A1S3AZZ7 (uncharacterized protein LOC103484414 OS=Cucumis melo OX=3656 GN=LOC103484414 PE=4 SV=1) HSP 1 Score: 157 bits (397), Expect = 2.76e-46 Identity = 86/145 (59.31%), Postives = 105/145 (72.41%), Query Frame = 0
BLAST of Csor.00g149050 vs. ExPASy TrEMBL
Match: A0A0A0KNP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520440 PE=4 SV=1) HSP 1 Score: 152 bits (385), Expect = 1.83e-44 Identity = 85/146 (58.22%), Postives = 107/146 (73.29%), Query Frame = 0
BLAST of Csor.00g149050 vs. TAIR 10
Match: AT2G34340.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 78.6 bits (192), Expect = 5.0e-15 Identity = 52/135 (38.52%), Postives = 77/135 (57.04%), Query Frame = 0
BLAST of Csor.00g149050 vs. TAIR 10
Match: AT1G29640.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 75.5 bits (184), Expect = 4.3e-14 Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 0
BLAST of Csor.00g149050 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 0
BLAST of Csor.00g149050 vs. TAIR 10
Match: AT5G45630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08 Identity = 41/119 (34.45%), Postives = 61/119 (51.26%), Query Frame = 0
BLAST of Csor.00g149050 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 48.9 bits (115), Expect = 4.3e-06 Identity = 41/138 (29.71%), Postives = 61/138 (44.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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