Csor.00g148640 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g148640
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionVQ motif-containing protein 1-like
LocationCsor_Chr14: 5620594 .. 5620893 (-)
RNA-Seq ExpressionCsor.00g148640
SyntenyCsor.00g148640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACTCCAAGAACACGCCGGCAGGAGGAGTGAAGGTGGTGCTAATTGAGTACCACCATGTTCACACCGACGTCTCCAACTTCAAATCCGTCGTTCAGACCCTCACCGGCAAGCATTCCTCCGCCGTCGAGGGCGGTGGAGGGACCTGCGGGAAGAGGCCGCGAGTGGAGGTTGAGAAAAGTTATATGAACCGGACGGCGTCGTTTCTGCACAGCACCTCGTTTAAGGACTTGGATCGCTTCCTCAACCTCCACCTCCCTGCCCTGGAGGATCTCAACTGGATTTGGGCCGACTGA

mRNA sequence

ATGGCCGACTCCAAGAACACGCCGGCAGGAGGAGTGAAGGTGGTGCTAATTGAGTACCACCATGTTCACACCGACGTCTCCAACTTCAAATCCGTCGTTCAGACCCTCACCGGCAAGCATTCCTCCGCCGTCGAGGGCGGTGGAGGGACCTGCGGGAAGAGGCCGCGAGTGGAGGTTGAGAAAAGTTATATGAACCGGACGGCGTCGTTTCTGCACAGCACCTCGTTTAAGGACTTGGATCGCTTCCTCAACCTCCACCTCCCTGCCCTGGAGGATCTCAACTGGATTTGGGCCGACTGA

Coding sequence (CDS)

ATGGCCGACTCCAAGAACACGCCGGCAGGAGGAGTGAAGGTGGTGCTAATTGAGTACCACCATGTTCACACCGACGTCTCCAACTTCAAATCCGTCGTTCAGACCCTCACCGGCAAGCATTCCTCCGCCGTCGAGGGCGGTGGAGGGACCTGCGGGAAGAGGCCGCGAGTGGAGGTTGAGAAAAGTTATATGAACCGGACGGCGTCGTTTCTGCACAGCACCTCGTTTAAGGACTTGGATCGCTTCCTCAACCTCCACCTCCCTGCCCTGGAGGATCTCAACTGGATTTGGGCCGACTGA

Protein sequence

MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVEKSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD
Homology
BLAST of Csor.00g148640 vs. NCBI nr
Match: KAG6581431.1 (hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207 bits (527), Expect = 1.68e-67
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1  MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVE 60
          MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVE
Sbjct: 1  MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVE 60

Query: 61 KSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99
          KSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD
Sbjct: 61 KSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99

BLAST of Csor.00g148640 vs. NCBI nr
Match: KAG7034723.1 (hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202 bits (514), Expect = 1.62e-65
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0

Query: 1  MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVE 60
          MADSKNTPAGGVKVVLIEYHHVHTDVS+FKSVVQTLTGKHSSAVEGGGGTC KRPRVEVE
Sbjct: 1  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVE 60

Query: 61 KSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99
          KSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD
Sbjct: 61 KSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99

BLAST of Csor.00g148640 vs. NCBI nr
Match: XP_038881537.1 (VQ motif-containing protein 10-like [Benincasa hispida])

HSP 1 Score: 127 bits (319), Expect = 1.27e-35
Identity = 65/111 (58.56%), Postives = 79/111 (71.17%), Query Frame = 0

Query: 1   MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVE 60
           M +SK T    V+VV+IEYHH+ TDVSNFKSVVQ+LTGKHSSAVEGGG +C KR RV  E
Sbjct: 1   MGNSKKTATAEVRVVVIEYHHIQTDVSNFKSVVQSLTGKHSSAVEGGGESCKKRQRVVAE 60

Query: 61  --KSYMN----------RTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99
             +S +N           +   + +TSFKDLDR L+LHLP++EDLNWIW D
Sbjct: 61  NNESIINIDFNDGRRYEESRKMIPTTSFKDLDRLLSLHLPSMEDLNWIWTD 111

BLAST of Csor.00g148640 vs. NCBI nr
Match: KAA0052539.1 (VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK13287.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 109 bits (273), Expect = 9.75e-29
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 12  VKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVEKSY-----MNR 71
           V+VVLIEYHH+ TD SNFKSVVQ+LTGKHSS  E GG  C KR RV    +      +N+
Sbjct: 10  VRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVARNNNESIININQ 69

Query: 72  TASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99
           +   +H+ SFKDLDR L+L LP++EDL+WI  D
Sbjct: 70  SVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102

BLAST of Csor.00g148640 vs. NCBI nr
Match: KGN49401.1 (hypothetical protein Csa_003856 [Cucumis sativus])

HSP 1 Score: 106 bits (264), Expect = 4.29e-27
Identity = 58/106 (54.72%), Postives = 70/106 (66.04%), Query Frame = 0

Query: 1   MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGT-CGKRPRVEV 60
           M +SK T    V+VVLIEYHH+ TD SNFKSVVQ+LTGKHS A E  GG  C KR RV  
Sbjct: 21  MGNSKKTAE--VRVVLIEYHHIQTDASNFKSVVQSLTGKHSPAAEDDGGEICRKRQRVVS 80

Query: 61  EKSY------MNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99
           + +       +N+    +H+ SFKDLDR L L LP++EDLNWI  D
Sbjct: 81  QNNNHESITNINQRVKMIHTKSFKDLDRLLALELPSMEDLNWILTD 124

BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A5D3CN21 (VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009060 PE=4 SV=1)

HSP 1 Score: 109 bits (273), Expect = 4.72e-29
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 12  VKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVEKSY-----MNR 71
           V+VVLIEYHH+ TD SNFKSVVQ+LTGKHSS  E GG  C KR RV    +      +N+
Sbjct: 10  VRVVLIEYHHIQTDASNFKSVVQSLTGKHSSTAEDGGEICRKRQRVVARNNNESIININQ 69

Query: 72  TASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99
           +   +H+ SFKDLDR L+L LP++EDL+WI  D
Sbjct: 70  SVKMIHTASFKDLDRLLSLELPSMEDLDWILTD 102

BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A0A0KNW8 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523420 PE=4 SV=1)

HSP 1 Score: 106 bits (264), Expect = 2.08e-27
Identity = 58/106 (54.72%), Postives = 70/106 (66.04%), Query Frame = 0

Query: 1   MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGT-CGKRPRVEV 60
           M +SK T    V+VVLIEYHH+ TD SNFKSVVQ+LTGKHS A E  GG  C KR RV  
Sbjct: 21  MGNSKKTAE--VRVVLIEYHHIQTDASNFKSVVQSLTGKHSPAAEDDGGEICRKRQRVVS 80

Query: 61  EKSY------MNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD 99
           + +       +N+    +H+ SFKDLDR L L LP++EDLNWI  D
Sbjct: 81  QNNNHESITNINQRVKMIHTKSFKDLDRLLALELPSMEDLNWILTD 124

BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A6J1KT83 (VQ motif-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111497400 PE=4 SV=1)

HSP 1 Score: 100 bits (250), Expect = 1.71e-25
Identity = 62/113 (54.87%), Postives = 75/113 (66.37%), Query Frame = 0

Query: 1   MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVE-- 60
           MA+SK   AG VKVV IEYHH+ TDVSNFKSVVQTLTG +S+A    GG   K+PRV+  
Sbjct: 1   MANSK--AAGPVKVVFIEYHHIQTDVSNFKSVVQTLTGMNSTA----GGNTRKKPRVDEN 60

Query: 61  --------VEKSYMN---RTASFLHSTSFKDLDRFL-NLHLPALEDLNWIWAD 99
                    E+S ++    T S + STSF+DLD  L  L LP++EDLNWIWAD
Sbjct: 61  IIDVRSARFEESTVSCETDTTSSVQSTSFEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A6J1EF02 (VQ motif-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111433561 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.40e-24
Identity = 61/113 (53.98%), Postives = 71/113 (62.83%), Query Frame = 0

Query: 1   MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRV--- 60
           MA+SK   AG VKVV IEYHH+ TDV+NFKSVVQTLTG +S+A    GG   K+ RV   
Sbjct: 1   MANSK--AAGPVKVVFIEYHHIQTDVTNFKSVVQTLTGMNSTA----GGNTRKKRRVDEN 60

Query: 61  ----------EVEKSYMNRTASFLHSTSFKDLDRFL-NLHLPALEDLNWIWAD 99
                     E  +S    T S L STSF+DLD  L  L LP++EDLNWIWAD
Sbjct: 61  IIDARSARFEESTESCETDTTSSLQSTSFEDLDPLLLKLELPSMEDLNWIWAD 107

BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A6J1CYB0 (uncharacterized protein LOC111015700 OS=Momordica charantia OX=3673 GN=LOC111015700 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.17e-21
Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = 0

Query: 12  VKVVLIEYHHVHTDVSNFKSVVQTLTG---KHSSAVEGGGGTCG---KRPRVEVEKSYMN 71
           VKVVLIEYHHV TDVSNFKSVVQ+LTG   + SSA+       G   KR R +++ +  N
Sbjct: 7   VKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAAN 66

Query: 72  RT--------ASF-LHSTSFKDLDRFLNLHLPALEDLNWIWAD 99
           +T          F LH+ SFKDLDR L  +LP+++DL+WIWAD
Sbjct: 67  QTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQDLDWIWAD 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6581431.11.68e-67100.00hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7034723.11.62e-6597.98hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038881537.11.27e-3558.56VQ motif-containing protein 10-like [Benincasa hispida][more]
KAA0052539.19.75e-2956.99VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK13287.1 VQ mot... [more]
KGN49401.14.29e-2754.72hypothetical protein Csa_003856 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5D3CN214.72e-2956.99VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0KNW82.08e-2754.72VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523420 PE=4 SV=... [more]
A0A6J1KT831.71e-2554.87VQ motif-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111497400 PE=4 ... [more]
A0A6J1EF021.40e-2453.98VQ motif-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC11143356... [more]
A0A6J1CYB01.17e-2152.43uncharacterized protein LOC111015700 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 22..42
e-value: 1.7E-8
score: 33.8
IPR039608VQ motif-containing protein 1/10PANTHERPTHR34777VQ MOTIF-CONTAINING PROTEIN 10coord: 9..99
NoneNo IPR availablePANTHERPTHR34777:SF1VQ MOTIF-CONTAINING PROTEIN 10coord: 9..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g148640.m01Csor.00g148640.m01mRNA