Csor.00g148640 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACTCCAAGAACACGCCGGCAGGAGGAGTGAAGGTGGTGCTAATTGAGTACCACCATGTTCACACCGACGTCTCCAACTTCAAATCCGTCGTTCAGACCCTCACCGGCAAGCATTCCTCCGCCGTCGAGGGCGGTGGAGGGACCTGCGGGAAGAGGCCGCGAGTGGAGGTTGAGAAAAGTTATATGAACCGGACGGCGTCGTTTCTGCACAGCACCTCGTTTAAGGACTTGGATCGCTTCCTCAACCTCCACCTCCCTGCCCTGGAGGATCTCAACTGGATTTGGGCCGACTGA ATGGCCGACTCCAAGAACACGCCGGCAGGAGGAGTGAAGGTGGTGCTAATTGAGTACCACCATGTTCACACCGACGTCTCCAACTTCAAATCCGTCGTTCAGACCCTCACCGGCAAGCATTCCTCCGCCGTCGAGGGCGGTGGAGGGACCTGCGGGAAGAGGCCGCGAGTGGAGGTTGAGAAAAGTTATATGAACCGGACGGCGTCGTTTCTGCACAGCACCTCGTTTAAGGACTTGGATCGCTTCCTCAACCTCCACCTCCCTGCCCTGGAGGATCTCAACTGGATTTGGGCCGACTGA ATGGCCGACTCCAAGAACACGCCGGCAGGAGGAGTGAAGGTGGTGCTAATTGAGTACCACCATGTTCACACCGACGTCTCCAACTTCAAATCCGTCGTTCAGACCCTCACCGGCAAGCATTCCTCCGCCGTCGAGGGCGGTGGAGGGACCTGCGGGAAGAGGCCGCGAGTGGAGGTTGAGAAAAGTTATATGAACCGGACGGCGTCGTTTCTGCACAGCACCTCGTTTAAGGACTTGGATCGCTTCCTCAACCTCCACCTCCCTGCCCTGGAGGATCTCAACTGGATTTGGGCCGACTGA MADSKNTPAGGVKVVLIEYHHVHTDVSNFKSVVQTLTGKHSSAVEGGGGTCGKRPRVEVEKSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD Homology
BLAST of Csor.00g148640 vs. NCBI nr
Match: KAG6581431.1 (hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207 bits (527), Expect = 1.68e-67 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Csor.00g148640 vs. NCBI nr
Match: KAG7034723.1 (hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 202 bits (514), Expect = 1.62e-65 Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0
BLAST of Csor.00g148640 vs. NCBI nr
Match: XP_038881537.1 (VQ motif-containing protein 10-like [Benincasa hispida]) HSP 1 Score: 127 bits (319), Expect = 1.27e-35 Identity = 65/111 (58.56%), Postives = 79/111 (71.17%), Query Frame = 0
BLAST of Csor.00g148640 vs. NCBI nr
Match: KAA0052539.1 (VQ motif-containing protein 1-like [Cucumis melo var. makuwa] >TYK13287.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 109 bits (273), Expect = 9.75e-29 Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of Csor.00g148640 vs. NCBI nr
Match: KGN49401.1 (hypothetical protein Csa_003856 [Cucumis sativus]) HSP 1 Score: 106 bits (264), Expect = 4.29e-27 Identity = 58/106 (54.72%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A5D3CN21 (VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009060 PE=4 SV=1) HSP 1 Score: 109 bits (273), Expect = 4.72e-29 Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0
BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A0A0KNW8 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523420 PE=4 SV=1) HSP 1 Score: 106 bits (264), Expect = 2.08e-27 Identity = 58/106 (54.72%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A6J1KT83 (VQ motif-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111497400 PE=4 SV=1) HSP 1 Score: 100 bits (250), Expect = 1.71e-25 Identity = 62/113 (54.87%), Postives = 75/113 (66.37%), Query Frame = 0
BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A6J1EF02 (VQ motif-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111433561 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.40e-24 Identity = 61/113 (53.98%), Postives = 71/113 (62.83%), Query Frame = 0
BLAST of Csor.00g148640 vs. ExPASy TrEMBL
Match: A0A6J1CYB0 (uncharacterized protein LOC111015700 OS=Momordica charantia OX=3673 GN=LOC111015700 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.17e-21 Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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