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Csor.00g148600 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACTAACTCCTCTCTCAGAATGAGGCGAAACTGCAACCTGGAACTTCGTCTTTCTCCCACCTCCTCCGCTATCGCCGCCGTCTCCGATCACTCCTCCGCCGCCGTCGCCGCCCCTAACGCCAACCCTCAAAGCCAACAACTCACCATCTTCTACAACGGCCGGATCTGCGTCTGTGACGCTACAGAGCTTCAGGTAACAAAACGAAACCAACATCTTTTTTTTCTTTTTTGCTGTTGTGTAGTACGGAACTTTCCTACACCCAGGGTTGCCTTTCTTCTGAAGAACCACGTGGCGTCCACTGATTGGATTGGACGTCTGTGAGCTGTGACTGTCTGCAACCTTTTTTTCCACTAAAATCTTCGTTCAATATGAATTCTTCATGCGACACTACGCGTGGGTTGGTTTCTGTCATGAAGCCGACACCAAGCCCTCGAACAGTCTCATTTTAATTGAGGTTCGACTAATTTTTCTCGAGCCTTGGAACAAAATACAAAATACACTATTTATTCTATATTTGAGTCATTTTCTTATCACAACTTCGAAACTCACAATTCTCTGTTCAACATTTAAGAACTCAATTGATATGACTAAGTTAAACGTCTCATATCAATGAATATGTATTCTTACTTATAAATTCATGATCATCTACGTGGATTTGCCACTTTTCCCCAACAACCCTCATACAAGGGATGAGTATTGCAGGCAATAGCGATTTTAAAGTTGGCGACTAGAGAAATGGAGGAAAAGGGTCCGAACGAAACGCCGTGGCCGATACTACAGCAGTCTCCGGCGCCTGTAACTCCGACCACCCCGGGGCTCTCGATGAAGAGATCGCTGCAAAGATTTCTGCAGAAGAGGAAGCACAGAGCCCAACCCACTTCTCCACCACAGAATTATTACAACGGAGACAACTAA ATGAAAACTAACTCCTCTCTCAGAATGAGGCGAAACTGCAACCTGGAACTTCGTCTTTCTCCCACCTCCTCCGCTATCGCCGCCGTCTCCGATCACTCCTCCGCCGCCGTCGCCGCCCCTAACGCCAACCCTCAAAGCCAACAACTCACCATCTTCTACAACGGCCGGATCTGCGTCTGTGACGCTACAGAGCTTCAGGCAATAGCGATTTTAAAGTTGGCGACTAGAGAAATGGAGGAAAAGGGTCCGAACGAAACGCCGTGGCCGATACTACAGCAGTCTCCGGCGCCTGTAACTCCGACCACCCCGGGGCTCTCGATGAAGAGATCGCTGCAAAGATTTCTGCAGAAGAGGAAGCACAGAGCCCAACCCACTTCTCCACCACAGAATTATTACAACGGAGACAACTAA ATGAAAACTAACTCCTCTCTCAGAATGAGGCGAAACTGCAACCTGGAACTTCGTCTTTCTCCCACCTCCTCCGCTATCGCCGCCGTCTCCGATCACTCCTCCGCCGCCGTCGCCGCCCCTAACGCCAACCCTCAAAGCCAACAACTCACCATCTTCTACAACGGCCGGATCTGCGTCTGTGACGCTACAGAGCTTCAGGCAATAGCGATTTTAAAGTTGGCGACTAGAGAAATGGAGGAAAAGGGTCCGAACGAAACGCCGTGGCCGATACTACAGCAGTCTCCGGCGCCTGTAACTCCGACCACCCCGGGGCTCTCGATGAAGAGATCGCTGCAAAGATTTCTGCAGAAGAGGAAGCACAGAGCCCAACCCACTTCTCCACCACAGAATTATTACAACGGAGACAACTAA MKTNSSLRMRRNCNLELRLSPTSSAIAAVSDHSSAAVAAPNANPQSQQLTIFYNGRICVCDATELQAIAILKLATREMEEKGPNETPWPILQQSPAPVTPTTPGLSMKRSLQRFLQKRKHRAQPTSPPQNYYNGDN Homology
BLAST of Csor.00g148600 vs. ExPASy Swiss-Prot
Match: Q8LBM2 (Protein TIFY 5A OS=Arabidopsis thaliana OX=3702 GN=TIFY5A PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.8e-14 Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 0
BLAST of Csor.00g148600 vs. ExPASy Swiss-Prot
Match: O64687 (Protein TIFY 5B OS=Arabidopsis thaliana OX=3702 GN=TIFY 5B PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.0e-12 Identity = 58/138 (42.03%), Postives = 76/138 (55.07%), Query Frame = 0
BLAST of Csor.00g148600 vs. ExPASy Swiss-Prot
Match: F4J078 (Protein JAZ13 OS=Arabidopsis thaliana OX=3702 GN=JAZ13 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.7e-08 Identity = 39/121 (32.23%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of Csor.00g148600 vs. ExPASy Swiss-Prot
Match: Q7XEZ1 (Protein TIFY 11d OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY11D PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 9.9e-04 Identity = 38/92 (41.30%), Postives = 48/92 (52.17%), Query Frame = 0
BLAST of Csor.00g148600 vs. NCBI nr
Match: KAG6581435.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 265 bits (678), Expect = 2.41e-89 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of Csor.00g148600 vs. NCBI nr
Match: XP_022926109.1 (protein TIFY 5A [Cucurbita moschata]) HSP 1 Score: 261 bits (666), Expect = 1.68e-87 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of Csor.00g148600 vs. NCBI nr
Match: KAG7034727.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 252 bits (643), Expect = 4.01e-84 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of Csor.00g148600 vs. NCBI nr
Match: XP_023544865.1 (protein TIFY 5A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 248 bits (632), Expect = 2.58e-82 Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of Csor.00g148600 vs. NCBI nr
Match: XP_022978906.1 (protein TIFY 5A [Cucurbita maxima]) HSP 1 Score: 238 bits (608), Expect = 9.02e-79 Identity = 127/137 (92.70%), Postives = 127/137 (92.70%), Query Frame = 0
BLAST of Csor.00g148600 vs. ExPASy TrEMBL
Match: A0A6J1EE47 (protein TIFY 5A OS=Cucurbita moschata OX=3662 GN=LOC111433321 PE=3 SV=1) HSP 1 Score: 261 bits (666), Expect = 8.15e-88 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0
BLAST of Csor.00g148600 vs. ExPASy TrEMBL
Match: A0A6J1IPA8 (protein TIFY 5A OS=Cucurbita maxima OX=3661 GN=LOC111478717 PE=3 SV=1) HSP 1 Score: 238 bits (608), Expect = 4.37e-79 Identity = 127/137 (92.70%), Postives = 127/137 (92.70%), Query Frame = 0
BLAST of Csor.00g148600 vs. ExPASy TrEMBL
Match: A0A6J1KRQ2 (protein TIFY 5A-like OS=Cucurbita maxima OX=3661 GN=LOC111497036 PE=3 SV=1) HSP 1 Score: 172 bits (437), Expect = 4.13e-53 Identity = 97/127 (76.38%), Postives = 101/127 (79.53%), Query Frame = 0
BLAST of Csor.00g148600 vs. ExPASy TrEMBL
Match: A0A1S3AZ71 (protein TIFY 5A OS=Cucumis melo OX=3656 GN=LOC103484359 PE=3 SV=1) HSP 1 Score: 169 bits (427), Expect = 1.83e-51 Identity = 98/129 (75.97%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of Csor.00g148600 vs. ExPASy TrEMBL
Match: A0A6J1EFE1 (protein TIFY 5A-like OS=Cucurbita moschata OX=3662 GN=LOC111433812 PE=3 SV=1) HSP 1 Score: 167 bits (424), Expect = 3.94e-51 Identity = 95/127 (74.80%), Postives = 100/127 (78.74%), Query Frame = 0
BLAST of Csor.00g148600 vs. TAIR 10
Match: AT1G30135.1 (jasmonate-zim-domain protein 8 ) HSP 1 Score: 79.7 bits (195), Expect = 2.0e-15 Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 0
BLAST of Csor.00g148600 vs. TAIR 10
Match: AT2G34600.1 (jasmonate-zim-domain protein 7 ) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13 Identity = 58/138 (42.03%), Postives = 76/138 (55.07%), Query Frame = 0
BLAST of Csor.00g148600 vs. TAIR 10
Match: AT3G22275.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.2 bits (139), Expect = 6.2e-09 Identity = 39/121 (32.23%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of Csor.00g148600 vs. TAIR 10
Match: AT5G13220.1 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 43.1 bits (100), Expect = 2.0e-04 Identity = 31/104 (29.81%), Postives = 50/104 (48.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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