Csor.00g148450 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g148450
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 5715962 .. 5719461 (-)
RNA-Seq ExpressionCsor.00g148450
SyntenyCsor.00g148450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATCATTGGTGACGGGTAAGGAGTTTTTCCTTTTCTAATGTAATCAGACAGTATGTCCACTGGGCCGCTATTTTGGTTCATAGAAAGGCAGCCAGGTGCTTCACAAATATTTGAAGGTGTGGAGATGGAGGACAAAGTTGTAAAAAAAGTGATTGAATATAACTCTGGAGATACTTTCTGTCTCTTCCTCTAATCACCAAATTTAATGGTTTAAACCCTTTAGTTAAGGCACTAAACTGCATTACAACAGAAAAAGCCTCAGTTCATTTACTCATCGTGGACATCTTGGTTAAAACAGAAAGACCTACTAATGGTTTCTTTTGCAGGTGAGAAACTGGAAATGATCTCAGTCCAGAAGAGCATGTAGGAATATTGGTTGTTACCCTTTCTGCGCTTGTCTCCCATGTCATTGTTATACCTCTATGCAAACAAAATAACATTATCCCAGTCATAAAATTCTCATCTATCATGTTCACAAGTTAACGGTAAGTGCATATGAATTGTCAGTAAGTCCCGTCAGTTTCTTCTTCAGCAACGGATTTTTAGTTTCCAACTCTACAAGGTGAATTTTTATTTTCCTGGTGGGTATGCCATGGAAGGCTTAATACGGTTGTTGGCTACAAAAGCACTGTCAGCATATGGCTCTTGCCTTGTTGGTATCTGTTCGGTGGAAAATCAAAGTATCTCAAGACCATTTACTGTTCTTGTGCTTATTCAGGAAGAAGTTATTTAGAATACACCTCCTATGCTTCAATCTTTGCTTACGTTTTATTCTTTTCTCCTAAGGATTGTTGGATGTGTCCCACATTGGTTAATTTAGGGAATGGTCATGGGTTTATAATCTAAGAATACACTCTCCATTGGTATGAGGCCTTTTGGGGAAACCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACAAGGATAATATGATGCAATTATTGAGGGGACAAGGAAAAGCTAAGATCATTTGAGTTTATGTGATTGAATCAATTTCTTGGATTCTTTGCTTGGAGAGAAACCGTCAAAATTTACATTGACGGGGACAAGTCCCTAATCAAATGCATATGATTTGATGATTTATTATGCACAATATTACACTATTATTATTAGTAATTAATTTCCATGGGAGTTCATTCTGTAAGCTCCTGATGTGTAAGTGTAGTTTTTTTCACTTAGTAATTAATATGATGCAATTATTGAGGGGACAAGGAAAAGCTAAGATCATTTGAGTTTATGTGATTGAATCAATTTCTTGGATTCTTTGCTTGGAGAGAAACCGTCAAAATTTACATTGACGGGGACAAGTCCCTAATCAAATGCATATGATTTGATGATTTATTATGCACAATATTACACTATTATTATTAGTAATTAATTTCCATGGGAGTTCATTCTGTAAGCTCCTGATGTGTAAGTGTAGTTTTTTTCACTTACCTTTTCAATACATCAATGAAAAGGAGGAAACGAAAAATGAGATTGGCTATTGCGGAGAATATCACAAATTGTACCAATGATAACTTGTGCTGATTTGTGTTGTGGAACTTAGCTTTGCTTTAGTATACCTTTTGATTGGTCTTCATAGAAGTTGATCAGAGTTTGATCTTAGACTACCATCACGTCATCATCATTTTTTTTTTTTTTTTTTAAAGAAAAGATTGTTATTTATGTATTTTATTATGCTTAGAGTCTACTCTTGAAAGGCATATGATACTGAATTAGGCTCGTTTTTCTTTATATCAGGTGTAACAGAAATAACGCCCTACTCTCCTGGTGATTCCACTCTCCAGCAAACAAGACAGACTTCTTACTTCAAAAAGCATAGGGAGCAGCATGAGTCATCAAAGATAATGGTATGGCTGTCATTATTGCTTATTCTCTACAATGTTTCTGAAACACCCTTTGCAATCATATCAGCCAAAGCTTTACAATCCTGAAACATCTTTAGAGTGTACTGTACTTTTTTTTCTTTCCTTATGGCAGATTCTCATTCTCATGAAATGAACAATATCCTTTCACTTCCTTTCATTCGGATGTCTGAATATAAAATTGATATGAATTCAGTTGCCTTTGAACTGAGCTGAGATCAACAGAATTCTTTTTTATGGTTTCCTTGAATGCACTATCAATATGTCAGTAGATAAGATTGGAACTCTAGAGTGATTTCTTTGGCAGAGGTTCCAAAAGTCCACGTTCCTCTTGTGGAAGATAAATTGCAAGTCTATGAATGATAGTCTATAATTACTAGGTTTGGATTGTCTATTGGTTGAGGCACAACTGAAAATGACTTTATTGACTCTGTTTTGTTATTTCTGCTACATATTCTATTCCCTTTTGAAAAACCTGAGCCTTATGACAAATATTTGCCAAATTGGTAGGCCAGGTATCTCTATTTTTCTTGTATTATGAGGAATTGAAGTGCTGCAACAACTGGACTGGAAGGGCAAGTTCTGGCATTCAAGGTACCAAAATTATAGTCAAATCCAATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGATAAATGAATCAAGTCAAGTCCAACTGTCAAAAATAAAAGTCTTCCGTGTTTTTCCCCTTCTTTTTCTCCAATCAAAGTCTAATCAAGTCATTCTCTTCAGTCCTAGTAATTCCTAGCTAATCAGGAGCTTGAATCTACAGTTTTTTTTTTATCCCTCTCTCTCTAAACTTAAGCATTCCCTTTTTTCTCTCCTCTTTTCTAGTTTTTATCACACAGAAAGCAAGATATGTTTCAATGTTATACGCTTTATTTGGCTTAAAATACCTTGTATTTCTCCCACATGCTCTTGGCTGTAGACTGAAAACTTGGCCATTTTTACACCCCAAAATCTGATTATGGAAGGAAAATGAGAAAAAATAAAAAGGAGAGATTTTGTTAAAAGCAGTTGATTCTATTTGCTCCCTTCAGAAGAATGAGGATCATCCAAATAGCCCATAAAGATTTGTTATCTTTTGCTACATGATTACCATTTGGATTGGTAAGTATTTTATTAACAGATGTTCCCTATTCCCACTGCATTTTCTAGACCCATCACAGAGATCGAGACCCTGTTTAGTTGCTAGTTGAGCTAAAGTAGTACTTTGTTTATTGCATTATCTCTATCTTTTTGTTAACCATGTGCTCCTCTTTTCTTGTTTGCAACGCAGCCACACACATACATATATCATATGTCCCTACGTTAACTTTTTCAACAGCAAAACCTTTTCTCAAGCTGTGAACATGAGAGCCACAAAATCCAAAGGTCAGGCCTTTTCTAAACTCCATATGGTACTTGTAATAATACCTAGATGCTTCTTTTAGAAATAATGTTTAAAAACTATCCTCCATTTTTAAATATAGAGAATCTCTTTTGACAGTGACAACTTAGCCTTGCTATTTCTCAAATTTTGTCTCTAATTTTTGCAGTCCTTGCAACCGAGAAAGGTTAA

mRNA sequence

ATGAGATCATTGGTGACGGGTGAGAAACTGGAAATGATCTCAGTCCAGAAGAGCATTAAGTCCCGTCAGTTTCTTCTTCAGCAACGGATTTTTAGTTTCCAACTCTACAAGGTGAATTTTTATTTTCCTGGTGGGTATGCCATGGAAGGCTTAATACGGTTGTTGGCTACAAAAGCACTGTCAGCATATGGCTCTTGCCTTGTTGTGCTGCAACAACTGGACTGGAAGGGCAAGTTCTGGCATTCAAGCCACACACATACATATATCATATGTCCCTACGTTAACTTTTTCAACAGCAAAACCTTTTCTCAAGCTGTGAACATGAGAGCCACAAAATCCAAAGTCCTTGCAACCGAGAAAGGTTAA

Coding sequence (CDS)

ATGAGATCATTGGTGACGGGTGAGAAACTGGAAATGATCTCAGTCCAGAAGAGCATTAAGTCCCGTCAGTTTCTTCTTCAGCAACGGATTTTTAGTTTCCAACTCTACAAGGTGAATTTTTATTTTCCTGGTGGGTATGCCATGGAAGGCTTAATACGGTTGTTGGCTACAAAAGCACTGTCAGCATATGGCTCTTGCCTTGTTGTGCTGCAACAACTGGACTGGAAGGGCAAGTTCTGGCATTCAAGCCACACACATACATATATCATATGTCCCTACGTTAACTTTTTCAACAGCAAAACCTTTTCTCAAGCTGTGAACATGAGAGCCACAAAATCCAAAGTCCTTGCAACCGAGAAAGGTTAA

Protein sequence

MRSLVTGEKLEMISVQKSIKSRQFLLQQRIFSFQLYKVNFYFPGGYAMEGLIRLLATKALSAYGSCLVVLQQLDWKGKFWHSSHTHTYIICPYVNFFNSKTFSQAVNMRATKSKVLATEKG
Homology
[Close]
BLAST of Csor.00g148450 vs. NCBI nr
Match: KAG6581450.1 (hypothetical protein SDJN03_21452, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240 bits (612), Expect = 9.19e-80
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MRSLVTGEKLEMISVQKSIKSRQFLLQQRIFSFQLYKVNFYFPGGYAMEGLIRLLATKAL 60
           MRSLVTGEKLEMISVQKSIKSRQFLLQQRIFSFQLYKVNFYFPGGYAMEGLIRLLATKAL
Sbjct: 1   MRSLVTGEKLEMISVQKSIKSRQFLLQQRIFSFQLYKVNFYFPGGYAMEGLIRLLATKAL 60

Query: 61  SAYGSCLVVLQQLDWKGKFWHSSHTHTYIICPYVNFFNSKTFSQAVNMRATKSKVLATEK 120
           SAYGSCLVVLQQLDWKGKFWHSSHTHTYIICPYVNFFNSKTFSQAVNMRATKSKVLATEK
Sbjct: 61  SAYGSCLVVLQQLDWKGKFWHSSHTHTYIICPYVNFFNSKTFSQAVNMRATKSKVLATEK 120

The following BLAST results are available for this feature:
BLAST of Csor.00g148450 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g148450 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581450.19.19e-80100.00hypothetical protein SDJN03_21452, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g148450 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g148450 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g148450.m01Csor.00g148450.m01mRNA