Csor.00g147670 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAATCCATGAGATCGAAGAGAGAGAAGAGGCTGCGGGCCATCCGGAGAGACATGGTTGACCCTTTTTACGACAAGAAAGACGCAGCCAAGCTTGCTGCTCAACAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCATCTCCTTCCACTTCCAATATTTCTACCATGGACGTCGCATCAGCCTCTGCTTCTACTGACGCCGACTCTGCCATGGGTATCCCCTTTGTTCCTTCTATTACTTGCAGACCTTTCTTTTTGCTCCTCTATGTTCATTCTTTAGGTTTACGGATTTCATTGTTGTGGTTTTTCATCTCATTATATGAAAATTCTTTCATCCTTGCCCTCTTTTGCTTTGTTCACTCAACCCATGACGAATATCGTAACCCAAGTTATTCTGTCATCCAAATGCACAATCTTTGTACGGTTAAAAGAGGGGTGAGAGGGATAGAGACATAGAGAGACAACCCTCGAATAAATTCCAAGCAATTCACAGCCCCCACTTTTGTGGCCTGATATATTGAGGCTTTGCTTCCATCCACTTCGTGGACTAGTCTACATTTCTAGCTCTAAAACTTGATTTTGAAAAAAAGAATAATTCATCGTAGTTTTAATTATGAATGAATAAGAGTATTTACACACAGGCGACCTCTAAGAAGATTACAACTAATCTTAAAATCACGAGGTTAACAGAGTCACTGAACTAAACAGAAAGCTAGCAACTGAAATAACAGATTAAATATACATATAGTTAACAGGAGTCAGGATGTCACAGTCGTATTTTCCACAATTAGATGGAATAGAGAAAATAGAGGGGTAATATGGAAGGATAGTTGCCCAACTTCAATATACAATTCTTATGTTTCCTTTTTTATGGAGATCAAAATGTTTTTGTGAAAGTTCGTTTGTGACAGTCTAGACTTGGTTTTCTCTGTTTTCAACTCATATTTTATGCTATAGGTGTTGATGAATACAACTTCTTTTTAATGTTGTATTAGCCATATAGCTGTTCAATTCTTTCAAGTGTCGAGTTACTTATTTCCCGTAATTATTATTTCACCATCTATGTTTTGTCTGCGACGTTAATTTATGTGACAGTTGAATTGAAATGGTTTTAAAGCTTTCCCGATCAGAAATATCCAAGTTTGTTCGTTAAACAACTTCTGAGGGAAAGTTACCATATGTTGTTCCTATCCCATATCCAGCATCACAAGGCACCCCGAATGAACAAAAAAAGTATTTCCTGCTAAGAGGCTATGTCTGTTTTTTAGCATTCTCTCTTTCTGATTGTGATCCTACTGTTTTTTTTTTTTTTTTTTAAATGAAAATGTCATGTGCCATTCTAAGCATAATTCCTGGTGTTCTATTGTGCTTTCCTACGTGCTTGTATCTGAGAGATTAGCTTATGATTTTAAAATTTTAGAAGAGGTATGTTGCTGTCAGTCCTAATGCGGAGCTCTTCATTGACTCCTTAGTGTGATTTGCACAAGGTCTTCTTTACTCCAACGATGGCTCCTTCAAAAAATGATAAACCTTTAACATTTTTGGGTAAAAGGAATATAAGGAAGTTTCCTTTTTCTTTTTCCTTTTTCTTGGAGTTCATCATGGGGTGGGGAATTTGAACCTTTTGTTGAAGGTACACAATTTATGGCAGTTGAGCAGTGCCCACTTAACAGTGGAATTGAAATACCACCCAGCTTCGTTACATCACGTACAAGTTGTGTTCTCATTTGTGGTGGTGCAGATGTATTTATTAGCATTGGTCCTTTCTATGTATGGTTTGAATTATTTGAGAATAGATGTGTGGAAGGTGTTAATTTCTTTGTTTGTGTTGCAGATGTGGAGATGAATGGATATGGTGAAAGCACGACACTGAAGGCTGTAGGTGGAATTGGGAAGAAATCGAAAAGAAAATTCAAGGTTGGTAAGGCCAAGCGCCGGGGTAAGTGCAAGATCAAGAGGAACCGCCACATTTAA ATGGCGAAATCCATGAGATCGAAGAGAGAGAAGAGGCTGCGGGCCATCCGGAGAGACATGGTTGACCCTTTTTACGACAAGAAAGACGCAGCCAAGCTTGCTGCTCAACAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCATCTCCTTCCACTTCCAATATTTCTACCATGGACGTCGCATCAGCCTCTGCTTCTACTGACGCCGACTCTGCCATGGATGTGGAGATGAATGGATATGGTGAAAGCACGACACTGAAGGCTGTAGGTGGAATTGGGAAGAAATCGAAAAGAAAATTCAAGGTTGGTAAGGCCAAGCGCCGGGGTAAGTGCAAGATCAAGAGGAACCGCCACATTTAA ATGGCGAAATCCATGAGATCGAAGAGAGAGAAGAGGCTGCGGGCCATCCGGAGAGACATGGTTGACCCTTTTTACGACAAGAAAGACGCAGCCAAGCTTGCTGCTCAACAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCATCTCCTTCCACTTCCAATATTTCTACCATGGACGTCGCATCAGCCTCTGCTTCTACTGACGCCGACTCTGCCATGGATGTGGAGATGAATGGATATGGTGAAAGCACGACACTGAAGGCTGTAGGTGGAATTGGGAAGAAATCGAAAAGAAAATTCAAGGTTGGTAAGGCCAAGCGCCGGGGTAAGTGCAAGATCAAGAGGAACCGCCACATTTAA MAKSMRSKREKRLRAIRRDMVDPFYDKKDAAKLAAQQAALAAPKLPVRPSPSTSNISTMDVASASASTDADSAMDVEMNGYGESTTLKAVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI Homology
BLAST of Csor.00g147670 vs. NCBI nr
Match: XP_022925597.1 (uncharacterized protein LOC111432982 [Cucurbita moschata] >KAG6581528.1 hypothetical protein SDJN03_21530, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034821.1 hypothetical protein SDJN02_04553 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 215 bits (548), Expect = 4.93e-70 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Csor.00g147670 vs. NCBI nr
Match: XP_023544802.1 (uncharacterized protein LOC111804285 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213 bits (542), Expect = 4.06e-69 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of Csor.00g147670 vs. NCBI nr
Match: XP_022978967.1 (uncharacterized protein LOC111478758 [Cucurbita maxima]) HSP 1 Score: 207 bits (526), Expect = 1.12e-66 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0
BLAST of Csor.00g147670 vs. NCBI nr
Match: XP_038877484.1 (uncharacterized protein LOC120069761 [Benincasa hispida]) HSP 1 Score: 186 bits (473), Expect = 1.34e-58 Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 0
BLAST of Csor.00g147670 vs. NCBI nr
Match: XP_008439430.1 (PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo] >KAA0052419.1 uncharacterized protein E6C27_scaffold120G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 176 bits (445), Expect = 2.49e-54 Identity = 98/120 (81.67%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of Csor.00g147670 vs. ExPASy TrEMBL
Match: A0A6J1EC45 (uncharacterized protein LOC111432982 OS=Cucurbita moschata OX=3662 GN=LOC111432982 PE=4 SV=1) HSP 1 Score: 215 bits (548), Expect = 2.39e-70 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Csor.00g147670 vs. ExPASy TrEMBL
Match: A0A6J1IMI5 (uncharacterized protein LOC111478758 OS=Cucurbita maxima OX=3661 GN=LOC111478758 PE=4 SV=1) HSP 1 Score: 207 bits (526), Expect = 5.41e-67 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0
BLAST of Csor.00g147670 vs. ExPASy TrEMBL
Match: A0A5A7UG11 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00140 PE=4 SV=1) HSP 1 Score: 176 bits (445), Expect = 1.20e-54 Identity = 98/120 (81.67%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of Csor.00g147670 vs. ExPASy TrEMBL
Match: A0A1S3AZE5 (uncharacterized protein LOC103484241 OS=Cucumis melo OX=3656 GN=LOC103484241 PE=4 SV=1) HSP 1 Score: 176 bits (445), Expect = 1.20e-54 Identity = 98/120 (81.67%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of Csor.00g147670 vs. ExPASy TrEMBL
Match: A0A0A0KJ42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538670 PE=4 SV=1) HSP 1 Score: 172 bits (436), Expect = 2.83e-53 Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 0
BLAST of Csor.00g147670 vs. TAIR 10
Match: AT1G30880.1 (unknown protein; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 59/123 (47.97%), Postives = 79/123 (64.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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