Csor.00g147630 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g147630
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 6214677 .. 6215052 (-)
RNA-Seq ExpressionCsor.00g147630
SyntenyCsor.00g147630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCGAATCCACAACACAATCCAGTTGGGATTTAGGGAAGCAAAGAGTGAAAGGAGGGAGGGAGGGTGGAGAAAGGTTGGATGCGATATTATTGAATATGTGAACTGTAAAAAGGAAAGCAAAAAATTGAGAGAGAGAGAGAGAGAGAGAGAGAATGTCGAAAAGGAAAAAGGTAAAATACAAATAGGAGTTGGACCTTGGACTTGGAATTGTTGTGTTATTGGAAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGTAAAGGTAAAGGTAAAGGCAAAAGCCCTAATGGCGGAAATGGAATTCAGTGCCGAGATTAGAGCGCACAACCTCATTATTACTACCCTTCATTAA

mRNA sequence

ATGATGCGAATCCACAACACAATCCAGTTGGGATTTAGGGAAGCAAAGAGTGAAAGGAGGGAGGGAGGGTGGAGAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGTAAAGGTAAAGGTAAAGGCAAAAGCCCTAATGGCGGAAATGGAATTCAGTGCCGAGATTAGAGCGCACAACCTCATTATTACTACCCTTCATTAA

Coding sequence (CDS)

ATGATGCGAATCCACAACACAATCCAGTTGGGATTTAGGGAAGCAAAGAGTGAAAGGAGGGAGGGAGGGTGGAGAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGCAAAGGTAAAGGTAAAGGTAAAGGCAAAAGCCCTAATGGCGGAAATGGAATTCAGTGCCGAGATTAGAGCGCACAACCTCATTATTACTACCCTTCATTAA

Protein sequence

MMRIHNTIQLGFREAKSERREGGWRKAKAKAKAKAKAKAKAKVKVKVKAKALMAEMEFSAEIRAHNLIITTLH
Homology
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BLAST of Csor.00g147630 vs. NCBI nr
Match: KAG6581532.1 (hypothetical protein SDJN03_21534, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128 bits (321), Expect = 7.12e-37
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MMRIHNTIQLGFREAKSERREGGWRKAKAKAKAKAKAKAKAKVKVKVKAKALMAEMEFSA 60
          MMRIHNTIQLGFREAKSERREGGWRKAKAKAKAKAKAKAKAKVKVKVKAKALMAEMEFSA
Sbjct: 1  MMRIHNTIQLGFREAKSERREGGWRKAKAKAKAKAKAKAKAKVKVKVKAKALMAEMEFSA 60

Query: 61 EIRAHNLIITTLH 73
          EIRAHNLIITTLH
Sbjct: 61 EIRAHNLIITTLH 73

The following BLAST results are available for this feature:
BLAST of Csor.00g147630 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g147630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581532.17.12e-37100.00hypothetical protein SDJN03_21534, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g147630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g147630 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g147630.m01Csor.00g147630.m01mRNA