Csor.00g147320 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g147320
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	gibberellin-regulated protein 5-like
Location	Csor_Chr20: 468187 .. 470698 (+)
RNA-Seq Expression	Csor.00g147320
Synteny	Csor.00g147320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACCCTTTCCACCTTCCTCCTCCTCTGCCTTGCCTTCATGCTTCTTTCATCCACACACATTCAGGTAAATACAAAATTTTATCATTTTTTTTTCTTTTTAATTCTCAATGAATTTCTCAATAAAAAATGAAACATTTTGAATATTCAAACAAAATGTTAATTAATAAATCTTTTTAAACAAAATAAAATCATCTTTTAGGTAAGTTTAAATAAAAAATAAAAAATTGTAATAATAAACGTGGCGGTGACGTGGCGGTAACTTTGGCGGTTCCCAATTAAATAATCGAGATGTGTTGATAAAAAGTGGACCGGCCGATGAAGCGGCGAGAAATAATGGGCGAATTTTCCCTGTCCCGCAGGCCGCCGCTAGCATTGAAACAGCAGTAGCGTCGTCAAAGATGTATGGCGGCACCCAGGGCAGCCTCCGTCCGGAAGGTATTTTCTTTTCCCGTTTCACTGGTCCAGTCGGAACCATAATCTTAAACTCTCTACATTTTTCGTTTTGGCCTTCTGCGGCGGCGTTTCAGAATGCGGGGGGCGGTGCACGGTGCGGTGCTCGGCAACGTCGTTCAAGAAGCCGTGTATGGTGTTCTGCAGAAAGTGCTGTGCGAAGTGCTTGTGCGTTCCTCCCGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGGTGGCCCGAAATGCCCCTAGTTCTCGTCGTCTCCATTTTCATTTATTTCTCCCTTTTAAATGCTTTCCTGGGCAACAACCTCTTATTTCGACTCAAATGATGGTGTTTATGTTGATTAATGTTAAGTTTATTTCGCCACGAGTTTAGACAAGTATTAATGAAATTTAAACTTAATATAATTAAAATTAGCTCGTAAAATTGTTCCAATAAGTTTCCAATCTAAATGAGTCAACAATGAGTCAAATACATTAAATAAAAAATTTAGGGGAAATATGATGTAACAATACAAATTTAGAGATAATTTTTTAATTTTAATTTTCTGAAGGATTAGTTTGGAAACAATTGGTTGTCGAAGAAAACAATAAGAAAATGGAAATGAAGAAATATCTATTAAACAACAATAAAAAAAAAAAAAAAAAAAAGAGACACCTGAAGGCCATCCCATGACATCTCCTCAATTATCTCCGAATTCCTAATTCAACCCTTTTCACAAACACCTATCTCTCTTGGGAACAATCCTCGTTAAATCAACCACAACGGAAGGGAAAGAATAAAATAAAATAAAATAAAAAGAAAAAAGAAAAAAGAAAACGAGGGGAAGGTTAAACGGAATAGAAATTCACACTCTTCATCGTCTTCTTCCTCCTGAATCTGTTGTTAACGTTGCCACCTGGCGCATCTTTGCCGCCGCCGCCGCCGCCGTCGTCGACGACCATTTGAAATTCCTTGTTTTTTTCTTCCAAACTCGGCAATCCGAGCAGATTTTCGCTTTGCCGCCAATTCAGTTCCCGCGACTCACAATTGGCGCCGACGATAGGAATAGGATAACTCTTAGCATGCGCGTTATTTCCATCTTGATAAGTTGAACTTCATTCTCTGTCGTGCTTGCTTTCTGAAGGTGAGGGACTTCTGTTTTCGATCATCTATTTCCCTCTGCCTCCCGATCGTTCATTCCGCCGTAATTTCGAAGCCTTTTTCTTAAGGATTCTGATTGTGGATTGGGAGTTTGTTTGAATGCTAGGGTTTTTTCTGGGAGGGGTTCGAGGGGTTTTAGCTTTCAAAATGTTTATCTGCATTAGCTTGTTGATCTGAATATTGCAGTGTGGAATATATTTTTAGCATTAGCTTTCTGCTTTATTTGAATTTGTCTCCCCTACCGATATCCTCGTGTTTAGAATTCGATGAAGGAATTTTCTTTCTGATTGATGAACGAATTGCTTAGTCTCGAGTCACGTCTGTACACTCACTCGGGCTTCGTCGCATGCTGCACCTTCAGCTTGGATTTTGCATAAAAGAAGTAACTTCAAATAGGAGCTGATTCGTACTAAACTGTGCGGTTCAATTCTATACATTTGCTTAATTCATCTTTTGTTTGAAATAATTGCTGTGGTTCACCTATAACTGTTTTCTGCTGAACAAAAGAAACTACAAGCTGGTTTGTTGAATGTATGAGGTAAGTCAAGTCATCCAATGTATTTTGGGAGTTTTAACAAGGAATCTACAATAAAGTGTGCAGGACGGTGCCTACCAAGCTTTTCTTATACTAGTTTCTTTCTTGGACATTTTCTTGAGATTCTTGTTCCCGCTTTCTGTATTGTTGCTTTTCTCATTCACCACCCTTAGTTTTCTGTCTTCCTGATACGGGATATTTTTATGTTTTTTAATCCTTGTCCTTTTATATGGAAAAGCTTAATTTTTCTCGTATATTACTTTCCAATTTGATTGAGATGAGATAGTATGATGTTTATCCTTGCCATCTTGTTTGAACATGTTCTTATTTCAGGATACAAAGCTTCTTTTTCACCAGCACTAAGTTGA

mRNA sequence

ATGGCTACCCTTTCCACCTTCCTCCTCCTCTGCCTTGCCTTCATGCTTCTTTCATCCACACACATTCAGGCCGCCGCTAGCATTGAAACAGCAGTAGCGTCGTCAAAGATGTATGGCGGCACCCAGGGCAGCCTCCGTCCGGAAGAATGCGGGGGGCGGTGCACGGTGCGGTGCTCGGCAACGTCGTTCAAGAAGCCGTGTATGGTGTTCTGCAGAAAGTGCTGTGCGAAGTGCTTGTGCGTTCCTCCCGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGTTGAACTTCATTCTCTGTCGTGCTTGCTTTCTGAAGGATACAAAGCTTCTTTTTCACCAGCACTAAGTTGA

Coding sequence (CDS)

ATGGCTACCCTTTCCACCTTCCTCCTCCTCTGCCTTGCCTTCATGCTTCTTTCATCCACACACATTCAGGCCGCCGCTAGCATTGAAACAGCAGTAGCGTCGTCAAAGATGTATGGCGGCACCCAGGGCAGCCTCCGTCCGGAAGAATGCGGGGGGCGGTGCACGGTGCGGTGCTCGGCAACGTCGTTCAAGAAGCCGTGTATGGTGTTCTGCAGAAAGTGCTGTGCGAAGTGCTTGTGCGTTCCTCCCGGCACCTATGGGAATAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGTTGAACTTCATTCTCTGTCGTGCTTGCTTTCTGAAGGATACAAAGCTTCTTTTTCACCAGCACTAAGTTGA

Protein sequence

MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRVELHSLSCLLSEGYKASFSPALS

Homology

[Close]

BLAST of Csor.00g147320 vs. ExPASy Swiss-Prot
Match: P27057 (Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.2e-25
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASI----ETAVASSKMYGGTQGSLRPEECGGRCTV 60
           MA   + +L  L  + L+   +  A  +    +    ++++YG ++G L P++C  +CT 
Sbjct: 1   MAGKMSIVLFVLLVVFLTQNQVSRANIMRDEQQQQQRNNQLYGVSEGRLHPQDCQPKCTY 60

Query: 61  RCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 103
           RCS TS+KKPCM FC+KCCAKCLCVP GTYGNKQ CPCYNNWKTKR
Sbjct: 61  RCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKR 106

[Close]

BLAST of Csor.00g147320 vs. ExPASy Swiss-Prot
Match: Q6NMQ7 (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-23
Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 4   LSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSF 63
           +++FLLL + F  +  T        + A    + YG   GSL+  +CGG+CT RCS T +
Sbjct: 5   ITSFLLLTILFTFVCLT------MSKEAEYHPESYG--PGSLKSYQCGGQCTRRCSNTKY 64

Query: 64  KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 103
            KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++
Sbjct: 65  HKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQ 95

[Close]

BLAST of Csor.00g147320 vs. ExPASy Swiss-Prot
Match: Q84J95 (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.9e-23
Identity = 54/97 (55.67%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 5   STFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFK 64
           +    L L F+L  S  +QAA             GG  G L+P++C  +C+ RCSATS K
Sbjct: 8   NALFFLTLLFLLSVSNLVQAAR------------GG--GKLKPQQCNSKCSFRCSATSHK 67

Query: 65  KPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTK 102
           KPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK
Sbjct: 68  KPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTK 90

[Close]

BLAST of Csor.00g147320 vs. ExPASy Swiss-Prot
Match: P47926 (Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-22
Identity = 44/57 (77.19%), Postives = 47/57 (82.46%), Query Frame = 0


Query: 45  LRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTK 102
           LRP +C  RCT RCSATS KKPCM FC+KCCA CLCVP G YGNKQ CPCYNNWKT+
Sbjct: 33  LRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQ 89

[Close]

BLAST of Csor.00g147320 vs. ExPASy Swiss-Prot
Match: Q6GKX7 (Gibberellin-regulated protein 12 OS=Arabidopsis thaliana OX=3702 GN=GASA12 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.7e-22
Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 16  LLSSTHIQAAASIETAVASSKMY-GGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKC 75
           LL +T       +E+   +  ++  G +GSL+PEEC   C  RCSATS +KPC+ FC KC
Sbjct: 13  LLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRKPCLFFCNKC 72

Query: 76  CAKCLCVPPGTYGNKQMCPCYNNWKTK 102
           C KCLCVP GTYG+K+ CPCYNNW TK
Sbjct: 73  CNKCLCVPSGTYGHKEECPCYNNWTTK 99

[Close]

BLAST of Csor.00g147320 vs. NCBI nr
Match: KAG6570409.1 (Protein GAST1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253 bits (645), Expect = 1.14e-84
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA
Sbjct: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRVELHSLSCLLSEGYKASF 120
           TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRVELHSLSCLLSEGYKASF
Sbjct: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRVELHSLSCLLSEGYKASF 120

Query: 121 SPALS 125
           SPALS
Sbjct: 121 SPALS 125

[Close]

BLAST of Csor.00g147320 vs. NCBI nr
Match: XP_022944307.1 (gibberellin-regulated protein 5-like [Cucurbita moschata] >KAG7010285.1 Protein GAST1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209 bits (532), Expect = 1.13e-67
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA
Sbjct: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR
Sbjct: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102

[Close]

BLAST of Csor.00g147320 vs. NCBI nr
Match: XP_022985831.1 (protein GAST1-like [Cucurbita maxima])

HSP 1 Score: 207 bits (526), Expect = 9.29e-67
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MATLSTFLLLCLA MLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA
Sbjct: 1   MATLSTFLLLCLALMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR
Sbjct: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102

[Close]

BLAST of Csor.00g147320 vs. NCBI nr
Match: XP_023511912.1 (protein GAST1-like [Cucurbita pepo subsp. pepo] >XP_023511913.1 protein GAST1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203 bits (516), Expect = 3.11e-65
Identity = 99/102 (97.06%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MATLSTFLLLC A MLLSSTHIQAA SIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA
Sbjct: 1   MATLSTFLLLCSALMLLSSTHIQAAVSIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR
Sbjct: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102

[Close]

BLAST of Csor.00g147320 vs. NCBI nr
Match: XP_022153040.1 (protein GAST1-like [Momordica charantia])

HSP 1 Score: 159 bits (402), Expect = 7.40e-48
Identity = 74/102 (72.55%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MA++S+ LLL L  M L  TH QAA+S E A  SS++YG T+G+L+P+ECGGRCT RCSA
Sbjct: 1   MASISSLLLLSLPLMFLFFTHNQAASSTEAAATSSELYGTTEGTLQPQECGGRCTARCSA 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           T+FKKPCM FC+KCCA CLCVPPGTYGNKQMCPCYNNWKTKR
Sbjct: 61  TAFKKPCMFFCKKCCATCLCVPPGTYGNKQMCPCYNNWKTKR 102

[Close]

BLAST of Csor.00g147320 vs. ExPASy TrEMBL
Match: A0A6J1FVD8 (gibberellin-regulated protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448790 PE=3 SV=1)

HSP 1 Score: 209 bits (532), Expect = 5.47e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA
Sbjct: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR
Sbjct: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102

[Close]

BLAST of Csor.00g147320 vs. ExPASy TrEMBL
Match: A0A6J1J9B2 (protein GAST1-like OS=Cucurbita maxima OX=3661 GN=LOC111483761 PE=3 SV=1)

HSP 1 Score: 207 bits (526), Expect = 4.50e-67
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MATLSTFLLLCLA MLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA
Sbjct: 1   MATLSTFLLLCLALMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR
Sbjct: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102

[Close]

BLAST of Csor.00g147320 vs. ExPASy TrEMBL
Match: A0A6J1DFN7 (protein GAST1-like OS=Momordica charantia OX=3673 GN=LOC111020637 PE=3 SV=1)

HSP 1 Score: 159 bits (402), Expect = 3.58e-48
Identity = 74/102 (72.55%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSA 60
           MA++S+ LLL L  M L  TH QAA+S E A  SS++YG T+G+L+P+ECGGRCT RCSA
Sbjct: 1   MASISSLLLLSLPLMFLFFTHNQAASSTEAAATSSELYGTTEGTLQPQECGGRCTARCSA 60

Query: 61  TSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           T+FKKPCM FC+KCCA CLCVPPGTYGNKQMCPCYNNWKTKR
Sbjct: 61  TAFKKPCMFFCKKCCATCLCVPPGTYGNKQMCPCYNNWKTKR 102

[Close]

BLAST of Csor.00g147320 vs. ExPASy TrEMBL
Match: A0A7C9AK22 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1)

HSP 1 Score: 139 bits (349), Expect = 4.61e-40
Identity = 66/97 (68.04%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 8   LLLCLAFMLLSSTHIQAAASIET--AVASSKMYGGTQGSLRPEECGGRCTVRCSATSFKK 67
           LLLC+  ML+     QAA+         S  MYG TQGSL P+ECGGRCT RCSAT +KK
Sbjct: 9   LLLCVTLMLVLIAANQAASQSTQPQGQTSHPMYGATQGSLHPQECGGRCTARCSATQYKK 68

Query: 68  PCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           PC+ FC KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKR
Sbjct: 69  PCLFFCNKCCAKCLCVPPGTYGNKQLCPCYNNWKTKR 105

[Close]

BLAST of Csor.00g147320 vs. ExPASy TrEMBL
Match: A0A6P6TQ32 (protein GAST1-like OS=Coffea arabica OX=13443 GN=LOC113702776 PE=3 SV=1)

HSP 1 Score: 137 bits (345), Expect = 1.99e-39
Identity = 70/109 (64.22%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVA-------SSKMYGGTQGSLRPEECGGR 60
           MAT +TFLL CLAF+LL     QA +S+  +V+       +++ YG T+GSLRP+ECG R
Sbjct: 1   MATKATFLL-CLAFVLLILAQNQA-SSVGLSVSQHQPKALNARQYGITEGSLRPQECGPR 60

Query: 61  CTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102
           C  RCS T++KKPCM+FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKR
Sbjct: 61  CGTRCSKTAYKKPCMLFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKR 107

[Close]

BLAST of Csor.00g147320 vs. TAIR 10
Match: AT1G74670.1 (Gibberellin-regulated family protein )

HSP 1 Score: 110.5 bits (275), Expect = 9.6e-25
Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 4   LSTFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSF 63
           +++FLLL + F  +  T        + A    + YG   GSL+  +CGG+CT RCS T +
Sbjct: 5   ITSFLLLTILFTFVCLT------MSKEAEYHPESYG--PGSLKSYQCGGQCTRRCSNTKY 64

Query: 64  KKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 103
            KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++
Sbjct: 65  HKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQ 95

[Close]

BLAST of Csor.00g147320 vs. TAIR 10
Match: AT3G02885.1 (GAST1 protein homolog 5 )

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24
Identity = 54/97 (55.67%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 5   STFLLLCLAFMLLSSTHIQAAASIETAVASSKMYGGTQGSLRPEECGGRCTVRCSATSFK 64
           +    L L F+L  S  +QAA             GG  G L+P++C  +C+ RCSATS K
Sbjct: 8   NALFFLTLLFLLSVSNLVQAAR------------GG--GKLKPQQCNSKCSFRCSATSHK 67

Query: 65  KPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTK 102
           KPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK
Sbjct: 68  KPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTK 90

[Close]

BLAST of Csor.00g147320 vs. TAIR 10
Match: AT2G30810.1 (Gibberellin-regulated family protein )

HSP 1 Score: 104.4 bits (259), Expect = 6.9e-23
Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 16  LLSSTHIQAAASIETAVASSKMY-GGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKC 75
           LL +T       +E+   +  ++  G +GSL+PEEC   C  RCSATS +KPC+ FC KC
Sbjct: 13  LLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRKPCLFFCNKC 72

Query: 76  CAKCLCVPPGTYGNKQMCPCYNNWKTK 102
           C KCLCVP GTYG+K+ CPCYNNW TK
Sbjct: 73  CNKCLCVPSGTYGHKEECPCYNNWTTK 99

[Close]

BLAST of Csor.00g147320 vs. TAIR 10
Match: AT3G10185.1 (Gibberellin-regulated family protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-21
Identity = 56/106 (52.83%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 1   MAT-LSTFLLLCLAFMLLSSTH----IQAAASIETAVASSKMYGGTQGSLRPEECGGRCT 60
           MAT LS  +   +   LL S H    I   A  ET  A   +           ECG RC 
Sbjct: 1   MATKLSIIVFSIVVLHLLLSAHMHFLINVCAECETKSAIPPLL----------ECGPRCG 60

Query: 61  VRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTK 102
            RCS T +KKPC+ FC KCC KCLCVPPGTYGNKQ+CPCYNNWKTK
Sbjct: 61  DRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTK 96

[Close]

BLAST of Csor.00g147320 vs. TAIR 10
Match: AT5G15230.2 (GAST1 protein homolog 4 )

HSP 1 Score: 94.0 bits (232), Expect = 9.3e-20
Identity = 40/68 (58.82%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 34  SSKMYGGTQGSLRPEECGGRCTVRCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCP 93
           S K YG   GSL+  +C   C  RC  T + K C+ FC KCC KCLCVPPG YGNKQ+C 
Sbjct: 11  SQKRYG--PGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCS 70

Query: 94  CYNNWKTK 102
           CYNNWKT+
Sbjct: 71  CYNNWKTQ 76

The following BLAST results are available for this feature:

BLAST of Csor.00g147320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27057	7.2e-25	50.94	Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1	[more]
Q6NMQ7	1.4e-23	54.55	Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV...	[more]
Q84J95	3.9e-23	55.67	Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV...	[more]
P47926	2.0e-22	77.19	Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1	[more]
Q6GKX7	9.7e-22	54.02	Gibberellin-regulated protein 12 OS=Arabidopsis thaliana OX=3702 GN=GASA12 PE=3 ...	[more]

BLAST of Csor.00g147320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570409.1	1.14e-84	100.00	Protein GAST1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022944307.1	1.13e-67	100.00	gibberellin-regulated protein 5-like [Cucurbita moschata] >KAG7010285.1 Protein ...	[more]
XP_022985831.1	9.29e-67	99.02	protein GAST1-like [Cucurbita maxima]	[more]
XP_023511912.1	3.11e-65	97.06	protein GAST1-like [Cucurbita pepo subsp. pepo] >XP_023511913.1 protein GAST1-li...	[more]
XP_022153040.1	7.40e-48	72.55	protein GAST1-like [Momordica charantia]	[more]

BLAST of Csor.00g147320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVD8	5.47e-68	100.00	gibberellin-regulated protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC1114487...	[more]
A0A6J1J9B2	4.50e-67	99.02	protein GAST1-like OS=Cucurbita maxima OX=3661 GN=LOC111483761 PE=3 SV=1	[more]
A0A6J1DFN7	3.58e-48	72.55	protein GAST1-like OS=Momordica charantia OX=3673 GN=LOC111020637 PE=3 SV=1	[more]
A0A7C9AK22	4.61e-40	68.04	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1	[more]
A0A6P6TQ32	1.99e-39	64.22	protein GAST1-like OS=Coffea arabica OX=13443 GN=LOC113702776 PE=3 SV=1	[more]

BLAST of Csor.00g147320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74670.1	9.6e-25	54.55	Gibberellin-regulated family protein	[more]
AT3G02885.1	2.8e-24	55.67	GAST1 protein homolog 5	[more]
AT2G30810.1	6.9e-23	54.02	Gibberellin-regulated family protein	[more]
AT3G10185.1	1.7e-21	52.83	Gibberellin-regulated family protein	[more]
AT5G15230.2	9.3e-20	58.82	GAST1 protein homolog 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 49..103 e-value: 2.7E-20 score: 72.3
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 8..102
None	No IPR available	PANTHER	PTHR23201:SF47	OS05G0376800 PROTEIN	coord: 8..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g147320.m01	Csor.00g147320.m01	mRNA