Csor.00g147210 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g147210
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	cyclin-dependent protein kinase inhibitor SMR13
Location	Csor_Chr20: 400315 .. 400692 (+)
RNA-Seq Expression	Csor.00g147210
Synteny	Csor.00g147210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCTTCTGGAGGCAAAATGGCCACGAGAACCAGAGCTAATTTACCCAACTTGAAGCTGAACAAGAAAATCAAGAAGACGAAGAAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAAGCTGAAGCAGATTCCAGCGGCGATACCAAACGACGCCGTTCATTTCACCGACGACTCTACTGACATCGACTGCGGGTGCAGCACTCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTAACGTGTCCGCCGGCCCCCAAGAAGCCAAGACCCGCTTCGGATTGCTCATTACGACGATCGCCCATTGCCTTTTTTGCTCCTCCAGAATTAGAGCTCTTCTTCTGCGCCTTGCCGGTGCCTGACATTTCAGTCTGA

mRNA sequence

ATGGCCCCTTCTGGAGGCAAAATGGCCACGAGAACCAGAGCTAATTTACCCAACTTGAAGCTGAACAAGAAAATCAAGAAGACGAAGAAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAAGCTGAAGCAGATTCCAGCGGCGATACCAAACGACGCCGTTCATTTCACCGACGACTCTACTGACATCGACTGCGGGTGCAGCACTCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTAACGTGTCCGCCGGCCCCCAAGAAGCCAAGACCCGCTTCGGATTGCTCATTACGACGATCGCCCATTGCCTTTTTTGCTCCTCCAGAATTAGAGCTCTTCTTCTGCGCCTTGCCGGTGCCTGACATTTCAGTCTGA

Coding sequence (CDS)

ATGGCCCCTTCTGGAGGCAAAATGGCCACGAGAACCAGAGCTAATTTACCCAACTTGAAGCTGAACAAGAAAATCAAGAAGACGAAGAAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAAGCTGAAGCAGATTCCAGCGGCGATACCAAACGACGCCGTTCATTTCACCGACGACTCTACTGACATCGACTGCGGGTGCAGCACTCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTAACGTGTCCGCCGGCCCCCAAGAAGCCAAGACCCGCTTCGGATTGCTCATTACGACGATCGCCCATTGCCTTTTTTGCTCCTCCAGAATTAGAGCTCTTCTTCTGCGCCTTGCCGGTGCCTGACATTTCAGTCTGA

Protein sequence

MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDSTDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPDISV

Homology

[Close]

BLAST of Csor.00g147210 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-12
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 57  TDDSTDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFF 116
           T      + GC TP  E+ RIPE+LTCPPAPKK + A +C+LRR  IAFFAPP++ELFF
Sbjct: 50  TPSPVSAESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFF 106

[Close]

BLAST of Csor.00g147210 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.5e-11
Identity = 45/103 (43.69%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 13  RANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDSTDIDCGCSTPKA 72
           +A  PN    K  +   K+Q  Q              P+ A   T        GC TPKA
Sbjct: 5   KARKPNRAEKKLTRSCFKKQVPQHNNINTNTIYSVPSPSPAAVLTSPG-----GCCTPKA 64

Query: 73  ERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFF 116
           ++ RIPE+LTCPPAPKK R + +C LRR  I FFAPPE+ELFF
Sbjct: 65  KKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Csor.00g147210 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 28/70 (40.00%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 46  PAAIPNDAVHFTDDSTDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAF 105
           P ++ + AV  T+D    D   +TP A+  RIP ++ CPPAPKK +     S    P  F
Sbjct: 37  PISLSSSAVSNTEDE---DLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREF 96

Query: 106 FAPPELELFF 116
           F+PP+LE  F
Sbjct: 97  FSPPDLETVF 101

[Close]

BLAST of Csor.00g147210 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.1e-04
Identity = 31/72 (43.06%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 48  AIPNDAVHFTDDSTDIDCGCS-TPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIA-- 107
           A P       +D  + +  CS TP A+  +IPE+L CPPAP+K RPA  C   RS +   
Sbjct: 40  APPEIVTEVEEDCYNEEEECSTTPTAKETKIPELLECPPAPRKRRPALKC---RSNVVRE 99

Query: 108 FFAPP-ELELFF 116
           FF PP +LE  F
Sbjct: 100 FFTPPSDLETVF 108

[Close]

BLAST of Csor.00g147210 vs. NCBI nr
Match: KAG6570398.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248 bits (632), Expect = 1.10e-82
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS 60
           MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS 60

Query: 61  TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120
           TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV
Sbjct: 61  TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120

Query: 121 PDISV 125
           PDISV
Sbjct: 121 PDISV 125

[Close]

BLAST of Csor.00g147210 vs. NCBI nr
Match: XP_022944116.1 (cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita moschata])

HSP 1 Score: 231 bits (588), Expect = 5.13e-76
Identity = 119/125 (95.20%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS 60
           MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQ   KLKQIPAAIPNDAVHFTDDS
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQ---KLKQIPAAIPNDAVHFTDDS 60

Query: 61  TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120
           TDID GCSTPKAERFRIP+ILTCPPAPKKPRP+SDCSLRRSPIAFFAPPELELFFCALPV
Sbjct: 61  TDIDGGCSTPKAERFRIPDILTCPPAPKKPRPSSDCSLRRSPIAFFAPPELELFFCALPV 120

Query: 121 PDISV 125
           PDISV
Sbjct: 121 PDISV 122

[Close]

BLAST of Csor.00g147210 vs. NCBI nr
Match: XP_022986710.1 (cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima])

HSP 1 Score: 228 bits (581), Expect = 5.99e-75
Identity = 118/125 (94.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS 60
           MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQ   KLKQIPA IPNDAVHFTDD 
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQ---KLKQIPAVIPNDAVHFTDDC 60

Query: 61  TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120
           +DID GCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV
Sbjct: 61  SDIDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120

Query: 121 PDISV 125
           PDISV
Sbjct: 121 PDISV 122

[Close]

BLAST of Csor.00g147210 vs. NCBI nr
Match: KAG7010272.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 227 bits (579), Expect = 1.10e-74
Identity = 118/125 (94.40%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS 60
           MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQ      KLKQIPAAIPNDAVHFTDDS
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQ------KLKQIPAAIPNDAVHFTDDS 60

Query: 61  TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120
           TDID GCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV
Sbjct: 61  TDIDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 119

Query: 121 PDISV 125
           PDISV
Sbjct: 121 PDISV 119

[Close]

BLAST of Csor.00g147210 vs. NCBI nr
Match: XP_023522908.1 (cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224 bits (570), Expect = 2.67e-73
Identity = 117/125 (93.60%), Postives = 117/125 (93.60%), Query Frame = 0


Query: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS 60
           MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQ     KLKQIPA I NDAVHFTDDS
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQ-----KLKQIPAVILNDAVHFTDDS 60

Query: 61  TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120
           TDID GCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV
Sbjct: 61  TDIDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120

Query: 121 PDISV 125
           PDISV
Sbjct: 121 PDISV 120

[Close]

BLAST of Csor.00g147210 vs. ExPASy TrEMBL
Match: A0A6J1FTJ6 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN=LOC111448665 PE=4 SV=1)

HSP 1 Score: 231 bits (588), Expect = 2.48e-76
Identity = 119/125 (95.20%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS 60
           MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQ   KLKQIPAAIPNDAVHFTDDS
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQ---KLKQIPAAIPNDAVHFTDDS 60

Query: 61  TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120
           TDID GCSTPKAERFRIP+ILTCPPAPKKPRP+SDCSLRRSPIAFFAPPELELFFCALPV
Sbjct: 61  TDIDGGCSTPKAERFRIPDILTCPPAPKKPRPSSDCSLRRSPIAFFAPPELELFFCALPV 120

Query: 121 PDISV 125
           PDISV
Sbjct: 121 PDISV 122

[Close]

BLAST of Csor.00g147210 vs. ExPASy TrEMBL
Match: A0A6J1JET4 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=LOC111484378 PE=4 SV=1)

HSP 1 Score: 228 bits (581), Expect = 2.90e-75
Identity = 118/125 (94.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS 60
           MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQ   KLKQIPA IPNDAVHFTDD 
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQ---KLKQIPAVIPNDAVHFTDDC 60

Query: 61  TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120
           +DID GCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV
Sbjct: 61  SDIDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120

Query: 121 PDISV 125
           PDISV
Sbjct: 121 PDISV 122

[Close]

BLAST of Csor.00g147210 vs. ExPASy TrEMBL
Match: A0A0A0L0Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 3.99e-43
Identity = 89/128 (69.53%), Postives = 97/128 (75.78%), Query Frame = 0


Query: 1   MAPSGGKMATRT-RANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIP-NDAVHFTD 60
           MAPSG +MATRT R  LPNLKL KKIKKT  ++Q  Q+ +     IP  +  ND V F D
Sbjct: 1   MAPSGARMATRTTRRALPNLKLTKKIKKTTNKKQPPQKIE-----IPVPVTQNDIVEFGD 60

Query: 61  DSTDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFF-CA 120
           + +D   GCSTPKAER RIPEILTCPPAPKKPR  SDCSLRRSPIAFFAPPELELFF  A
Sbjct: 61  ECSD--GGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSLRRSPIAFFAPPELELFFFVA 120

Query: 121 LPVPDISV 125
           LPVPDISV
Sbjct: 121 LPVPDISV 121

[Close]

BLAST of Csor.00g147210 vs. ExPASy TrEMBL
Match: A0A6J1D3Z6 (cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3673 GN=LOC111017372 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 1.04e-41
Identity = 85/126 (67.46%), Postives = 95/126 (75.40%), Query Frame = 0


Query: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPA-AIPNDAVHFTDD 60
           MAPSGG+MA RTR N  +LKL KK+KKTKKQQQQ+         +PA A  ND V  ++D
Sbjct: 1   MAPSGGRMAARTRGNSQSLKL-KKMKKTKKQQQQK---------LPAPATENDVVQCSND 60

Query: 61  STDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALP 120
             DID GCSTP+AERFRIPEI+TCPPAPKK RP SDCS RRSPIAFFAPPELELFF    
Sbjct: 61  --DIDGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFF-FA 113

Query: 121 VPDISV 125
           +PDI V
Sbjct: 121 LPDIPV 113

[Close]

BLAST of Csor.00g147210 vs. ExPASy TrEMBL
Match: A0A6J1K7R4 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 GN=LOC111491400 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 5.56e-37
Identity = 79/121 (65.29%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 8   MATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDD---STDID 67
           MATR R N+PN KLNKK+KKT  ++ QQ Q Q     IP    ND V F DD   + D+ 
Sbjct: 1   MATRPRRNIPNSKLNKKMKKTTTKKPQQPQNQ-----IPPP-QNDVVQFPDDDFDNDDVG 60

Query: 68  CGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPDIS 125
            G STPKAERFRIPEILTCPP PKK RP SDCS RRSPIAFFAPPELELFF  +  PDIS
Sbjct: 61  GGYSTPKAERFRIPEILTCPPGPKKQRPVSDCSFRRSPIAFFAPPELELFFF-ISRPDIS 114

[Close]

BLAST of Csor.00g147210 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-13
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 57  TDDSTDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFF 116
           T      + GC TP  E+ RIPE+LTCPPAPKK + A +C+LRR  IAFFAPP++ELFF
Sbjct: 50  TPSPVSAESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFF 106

[Close]

BLAST of Csor.00g147210 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12
Identity = 45/103 (43.69%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 13  RANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDSTDIDCGCSTPKA 72
           +A  PN    K  +   K+Q  Q              P+ A   T        GC TPKA
Sbjct: 5   KARKPNRAEKKLTRSCFKKQVPQHNNINTNTIYSVPSPSPAAVLTSPG-----GCCTPKA 64

Query: 73  ERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFF 116
           ++ RIPE+LTCPPAPKK R + +C LRR  I FFAPPE+ELFF
Sbjct: 65  KKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Csor.00g147210 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 7.6e-06
Identity = 28/70 (40.00%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 46  PAAIPNDAVHFTDDSTDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAF 105
           P ++ + AV  T+D    D   +TP A+  RIP ++ CPPAPKK +     S    P  F
Sbjct: 37  PISLSSSAVSNTEDE---DLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREF 96

Query: 106 FAPPELELFF 116
           F+PP+LE  F
Sbjct: 97  FSPPDLETVF 101

[Close]

BLAST of Csor.00g147210 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05
Identity = 31/72 (43.06%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 48  AIPNDAVHFTDDSTDIDCGCS-TPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIA-- 107
           A P       +D  + +  CS TP A+  +IPE+L CPPAP+K RPA  C   RS +   
Sbjct: 40  APPEIVTEVEEDCYNEEEECSTTPTAKETKIPELLECPPAPRKRRPALKC---RSNVVRE 99

Query: 108 FFAPP-ELELFF 116
           FF PP +LE  F
Sbjct: 100 FFTPPSDLETVF 108

[Close]

BLAST of Csor.00g147210 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 21/48 (43.75%), Postives = 28/48 (58.33%), Query Frame = 0


Query: 68  STPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFF 116
           +TP A   RIP +  CP APKK +P+  CS       +F+PP+LE  F
Sbjct: 57  TTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

The following BLAST results are available for this feature:

BLAST of Csor.00g147210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ECS5	3.1e-12	59.32	Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G...	[more]
F4IWB3	3.5e-11	43.69	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q1G3Y4	1.1e-04	40.00	Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q29Q81	4.1e-04	43.06	Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Csor.00g147210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570398.1	1.10e-82	100.00	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_022944116.1	5.13e-76	95.20	cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita moschata]	[more]
XP_022986710.1	5.99e-75	94.40	cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima]	[more]
KAG7010272.1	1.10e-74	94.40	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_023522908.1	2.67e-73	93.60	cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of Csor.00g147210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTJ6	2.48e-76	95.20	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JET4	2.90e-75	94.40	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0L0Q1	3.99e-43	69.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1	[more]
A0A6J1D3Z6	1.04e-41	67.46	cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3...	[more]
A0A6J1K7R4	5.56e-37	65.29	cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Csor.00g147210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51355.1	2.2e-13	59.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G20898.1	2.5e-12	43.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G60783.1	7.6e-06	40.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G40460.1	2.9e-05	43.06	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G10690.1	1.1e-04	43.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 18..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR33142:SF8	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 10..116
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 10..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g147210.m01	Csor.00g147210.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus