Csor.00g147090 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g147090
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr20: 351548 .. 353001 (-)
RNA-Seq ExpressionCsor.00g147090
SyntenyCsor.00g147090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACGTGTATGGAGTGGTCAGGTCAGTGAAGAGCTTTCGCTGCTGACGCTAATCCTACAAGGACAGAGAGAAGAAACGCTCTCTCTCTCTCTCTCTCCCTCCTCGGTGGTGATTCAAAAGCTATTAAGGTTAGGTTTTTAAATTGCTTCCTTTTTTTGCGCCAATTGATTTGGATTAAATCTTAATTGATTGTTTAAGCTATCAGATCAGAGTTATTCCACCTCGACCCTGATTTTCTTTTGTCGTTTCATGTATATTTATCTACATTAGAACCCGGGGTTGGTTATACTTCCCATGGGATTCCGAGTTCTTCGATCGAGATTAAAGATTCGTCTCTCGGATATATCCTTCGTCAGGTTAGGGCTTATGGTCTGTTCATCGTGTTCCCTTCTTTGAATACTCCTTTCGCTGGTGAAACTTTTCAACTGTGTTGTTCTGTTGTTGTGTACAAACAGAGTGGGGGTTTGGGATTTTTTTTTTTTATTTTTTTATTTTTTGAGTATTTTTGTTGCCTACTGATTGGTGTTTCGTGGGTTTGCCAAGCTGTGTATGCCATTGAAACGTATTCAAACTTCATATGATTCTATATGGTGACTGAATTACAAGTCTTCTATACAGTTGGGTTGCTAGAAATGTAGAGAACATGGCAGTGGTTATGAAATTAAGCTTCAAATCATTACTAGCTCACACTTTATCCTGTGGAAAGCGAACAGAGGTTTAAGAATTCTTCAACGAAGGATGGAAGAGGGGTATCTGAAGAGATTGATACTTAGGCTTGCTGATTTCCATCTTCTTTTATCCTACTTACTCTGCTTAAAAGTTCAATGGCTGAAAGATGAATGTGGTATAGTAATTTGTTGTTTCCATTCTCCAGACAGGACATTGGTCTAACTATCTCATTTCAAGCCTATCTAGCAATACTTCATTTCAAAATGAAGCATGGACGTAAAGAATTTTTGATTACCAGCATAAACTTATCATATCAATGTCTTGTGGTATACTTTTGGAATAGTTGTGAGTTTAGAGAACCAGAGTGATATGAGTAGAACTTGAGGACCAGAGTGATATAAATAGAAGTTTATAGACGTAAATGATAATTGGTAGTTGGAGCCAATAATAGTTTTCAGCATTTGAGATGCCGTCTCTGGATATATTGCTTCCTACTTCCTTCAACTATAATTTCTTTCTATGCATCATTCATTCCAAACTGGGACATGAGAAAGATTCCTGAGTTTTGAATGTTTACAGGGTACGAACGACAAGAAATACTTTATGTTCCAAGTGATTCGCCTTTGTGGTTTTAAACCAACCTTAAGCATTGTGCACCACTCTTTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTGCATCTTCTTTTCTTTTTGAGTATTTTTGGAGTGATTTTAATGCAGTATACTCTAAAAGATGGATTCTCGTGA

mRNA sequence

ATGCCACGTGTATGGAGTGGTCAGGTCAGTGAAGAGCTTTCGCTGCTGACGCTAATCCTACAAGGACAGAGAGAAGAAACGCTCTCTCTCTCTCTCTCTCCCTCCTCGGTGGTGATTCAAAAGCTATTAAGATCAGAGTTATTCCACCTCGACCCTGATTTTCTTTTGTCGTTTCATGTATATTTATCTACATTAGAACCCGGGGTTGGTTATACTTCCCATGGGATTCCGAGTTCTTCGATCGAGATTAAAGATTCGTCTCTCGGATATATCCTTCGTCAGTATACTCTAAAAGATGGATTCTCGTGA

Coding sequence (CDS)

ATGCCACGTGTATGGAGTGGTCAGGTCAGTGAAGAGCTTTCGCTGCTGACGCTAATCCTACAAGGACAGAGAGAAGAAACGCTCTCTCTCTCTCTCTCTCCCTCCTCGGTGGTGATTCAAAAGCTATTAAGATCAGAGTTATTCCACCTCGACCCTGATTTTCTTTTGTCGTTTCATGTATATTTATCTACATTAGAACCCGGGGTTGGTTATACTTCCCATGGGATTCCGAGTTCTTCGATCGAGATTAAAGATTCGTCTCTCGGATATATCCTTCGTCAGTATACTCTAAAAGATGGATTCTCGTGA

Protein sequence

MPRVWSGQVSEELSLLTLILQGQREETLSLSLSPSSVVIQKLLRSELFHLDPDFLLSFHVYLSTLEPGVGYTSHGIPSSSIEIKDSSLGYILRQYTLKDGFS
Homology
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BLAST of Csor.00g147090 vs. NCBI nr
Match: KAG6570386.1 (hypothetical protein SDJN03_29301, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197 bits (502), Expect = 1.37e-63
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MPRVWSGQVSEELSLLTLILQGQREETLSLSLSPSSVVIQKLLRSELFHLDPDFLLSFHV 60
           MPRVWSGQVSEELSLLTLILQGQREETLSLSLSPSSVVIQKLLRSELFHLDPDFLLSFHV
Sbjct: 1   MPRVWSGQVSEELSLLTLILQGQREETLSLSLSPSSVVIQKLLRSELFHLDPDFLLSFHV 60

Query: 61  YLSTLEPGVGYTSHGIPSSSIEIKDSSLGYILRQYTLKDGFS 102
           YLSTLEPGVGYTSHGIPSSSIEIKDSSLGYILRQYTLKDGFS
Sbjct: 61  YLSTLEPGVGYTSHGIPSSSIEIKDSSLGYILRQYTLKDGFS 102

The following BLAST results are available for this feature:
BLAST of Csor.00g147090 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g147090 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570386.11.37e-63100.00hypothetical protein SDJN03_29301, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g147090 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g147090 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g147090.m01Csor.00g147090.m01mRNA