Csor.00g146430 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g146430
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DUF740 domain-containing protein
Location	Csor_Chr16: 3726921 .. 3727334 (-)
RNA-Seq Expression	Csor.00g146430
Synteny	Csor.00g146430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGCGGCACCAAAATCACAACCAGTTGCCCGGAATCTGCCCATCCTGTCTCCGGGAAAGGCTTCAACAATTACAGCAATCATCAATTTCTCATTCCAATTCTCGTTCAACCTCTTCCTCTTCTTTTCTTAAGTCCTCGGAATCTTTCTTCTCCGGCAACACCTCATGGCGGCGCCGACATACTAGGAACGCCTCCGAGCTGTTTACTGGGTCGATGGCGGCGGATTTGTTTGGAGACAAGGTGAAGAAGAGCAGCTCTATTCGGATCTCTGCCGATGGCGGCGGCGGCGGCGGCGGGAGGAAAGAAGAAAGTTGGGTTTTGGTCCAGGTTTTTGGTCCGCCCCAAAGCTCTGTATTTTCATTCCCACCCCAAAGTTTCTTCTAG

mRNA sequence

ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGCGGCACCAAAATCACAACCAGTTGCCCGGAATCTGCCCATCCTGTCTCCGGGAAAGGCTTCAACAATTACAGCAATCATCAATTTCTCATTCCAATTCTCGTTCAACCTCTTCCTCTTCTTTTCTTAAGTCCTCGGAATCTTTCTTCTCCGGCAACACCTCATGGCGGCGCCGACATACTAGGAACGCCTCCGAGCTGTTTACTGGGTCGATGGCGGCGGATTTGTTTGGAGACAAGGTGAAGAAGAGCAGCTCTATTCGGATCTCTGCCGATGGCGGCGGCGGCGGCGGCGGGAGGAAAGAAGAAAGTTGGGTTTTGGTCCAGGTTTTTGGTCCGCCCCAAAGCTCTGTATTTTCATTCCCACCCCAAAGTTTCTTCTAG

Coding sequence (CDS)

ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGCGGCACCAAAATCACAACCAGTTGCCCGGAATCTGCCCATCCTGTCTCCGGGAAAGGCTTCAACAATTACAGCAATCATCAATTTCTCATTCCAATTCTCGTTCAACCTCTTCCTCTTCTTTTCTTAAGTCCTCGGAATCTTTCTTCTCCGGCAACACCTCATGGCGGCGCCGACATACTAGGAACGCCTCCGAGCTGTTTACTGGGTCGATGGCGGCGGATTTGTTTGGAGACAAGGTGAAGAAGAGCAGCTCTATTCGGATCTCTGCCGATGGCGGCGGCGGCGGCGGCGGGAGGAAAGAAGAAAGTTGGGTTTTGGTCCAGGTTTTTGGTCCGCCCCAAAGCTCTGTATTTTCATTCCCACCCCAAAGTTTCTTCTAG

Protein sequence

MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFFSGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGRKEESWVLVQVFGPPQSSVFSFPPQSFF

Homology

[Close]

BLAST of Csor.00g146430 vs. NCBI nr
Match: KAG6577287.1 (hypothetical protein SDJN03_24861, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 267 bits (683), Expect = 4.48e-90
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGRKEESWVLVQV 120
           SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGRKEESWVLVQV
Sbjct: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGRKEESWVLVQV 120

Query: 121 FGPPQSSVFSFPPQSFF 137
           FGPPQSSVFSFPPQSFF
Sbjct: 121 FGPPQSSVFSFPPQSFF 137

[Close]

BLAST of Csor.00g146430 vs. NCBI nr
Match: KAG7015370.1 (hypothetical protein SDJN02_23005, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210 bits (534), Expect = 1.26e-67
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGG 109
           SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGG
Sbjct: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGG 109

[Close]

BLAST of Csor.00g146430 vs. NCBI nr
Match: XP_023553119.1 (uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204 bits (520), Expect = 3.74e-65
Identity = 109/134 (81.34%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESA+ECKRHQNHNQLPGICPSCLRERLQQLQQSSIS+S+SRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESARECKRHQNHNQLPGICPSCLRERLQQLQQSSISYSDSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGGRKEESWVLVQV 120
           SGNTSWRRRHTRNASEL TGSMAADLFGDKVKKSSSIRISADGGGGGGG K++     + 
Sbjct: 61  SGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGGGGKKKVGFWSRF 120

Query: 121 FGPPQSSVFSFPPQ 134
              P++  F   P+
Sbjct: 121 LVRPKALYFHSHPK 134

[Close]

BLAST of Csor.00g146430 vs. NCBI nr
Match: XP_022929275.1 (uncharacterized protein LOC111435907 [Cucurbita moschata])

HSP 1 Score: 199 bits (505), Expect = 6.32e-63
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSIS+++SRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISYADSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGG 106
           SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGG
Sbjct: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGG 106

[Close]

BLAST of Csor.00g146430 vs. NCBI nr
Match: XP_022985135.1 (uncharacterized protein LOC111483218, partial [Cucurbita maxima])

HSP 1 Score: 197 bits (501), Expect = 1.84e-61
Identity = 105/110 (95.45%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSS-ISHSNSRSTSSSSFLKSSESF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSS I++S+SRSTSSSSFLKSSESF
Sbjct: 56  MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRSTSSSSFLKSSESF 115

Query: 61  FSGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGG 109
           FSGNTSWRRRHTRNASEL TGSMAADLFGDKVKKSSSIRISADGGGGGGG
Sbjct: 116 FSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGGG 165

[Close]

BLAST of Csor.00g146430 vs. ExPASy TrEMBL
Match: A0A6J1ETY8 (uncharacterized protein LOC111435907 OS=Cucurbita moschata OX=3662 GN=LOC111435907 PE=4 SV=1)

HSP 1 Score: 199 bits (505), Expect = 3.06e-63
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSIS+++SRSTSSSSFLKSSESFF
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISYADSRSTSSSSFLKSSESFF 60

Query: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGG 106
           SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGG
Sbjct: 61  SGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGG 106

[Close]

BLAST of Csor.00g146430 vs. ExPASy TrEMBL
Match: A0A6J1JAI6 (uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 8.93e-62
Identity = 105/110 (95.45%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSS-ISHSNSRSTSSSSFLKSSESF 60
           MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSS I++S+SRSTSSSSFLKSSESF
Sbjct: 56  MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRSTSSSSFLKSSESF 115

Query: 61  FSGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGGG 109
           FSGNTSWRRRHTRNASEL TGSMAADLFGDKVKKSSSIRISADGGGGGGG
Sbjct: 116 FSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGGG 165

[Close]

BLAST of Csor.00g146430 vs. ExPASy TrEMBL
Match: A0A0A0KZB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1)

HSP 1 Score: 127 bits (319), Expect = 4.95e-35
Identity = 73/110 (66.36%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRH NHN LPGICPSCLRE+LQQ  QS  ++S+S+ST SS    SS+ FF
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFSSPSSSSSDFFF 60

Query: 61  SGNTS--WRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGG 108
           S ++S   RR H RNASE  TGSMA DL  DK+KK+ SIRIS DGG G G
Sbjct: 61  SADSSRRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAG 109

[Close]

BLAST of Csor.00g146430 vs. ExPASy TrEMBL
Match: A0A5A7TS78 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004740 PE=4 SV=1)

HSP 1 Score: 127 bits (318), Expect = 7.23e-35
Identity = 74/111 (66.67%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRH N+N LPGICPSCLRE+LQQ  QS  ++S+S+ST SS    SS+ FF
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFSSPSSSSSDFFF 60

Query: 61  SGNTSWRRR---HTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGG 108
           S ++S R R   H RNASE  TGSMA DL  DK+KKS SIRISADGG G G
Sbjct: 61  SADSSRRHRRHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGGTGAG 110

[Close]

BLAST of Csor.00g146430 vs. ExPASy TrEMBL
Match: A0A5D3CZT1 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00010 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 5.88e-34
Identity = 73/111 (65.77%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISHSNSRSTSSSSFLKSSESFF 60
           MGKSESAKECKRH N+N LPGICPSCLRE+LQQ  QS  ++S+S+ST SS    SS+ FF
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFSSPSSSSSDFFF 60

Query: 61  SGNTSWRRR---HTRNASELFTGSMAADLFGDKVKKSSSIRISADGGGGGG 108
           S ++S R R   H RNASE  TGSMA DL  DK+KKS SIRISADG  G G
Sbjct: 61  SADSSRRHRRHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAG 110

The following BLAST results are available for this feature:

BLAST of Csor.00g146430 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g146430 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577287.1	4.48e-90	100.00	hypothetical protein SDJN03_24861, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7015370.1	1.26e-67	100.00	hypothetical protein SDJN02_23005, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023553119.1	3.74e-65	81.34	uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo]	[more]
XP_022929275.1	6.32e-63	97.17	uncharacterized protein LOC111435907 [Cucurbita moschata]	[more]
XP_022985135.1	1.84e-61	95.45	uncharacterized protein LOC111483218, partial [Cucurbita maxima]	[more]

BLAST of Csor.00g146430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ETY8	3.06e-63	97.17	uncharacterized protein LOC111435907 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]
A0A6J1JAI6	8.93e-62	95.45	uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218...	[more]
A0A0A0KZB2	4.95e-35	66.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1	[more]
A0A5A7TS78	7.23e-35	66.67	DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3CZT1	5.88e-34	65.77	DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Csor.00g146430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008004	Protein OCTOPUS-like	PFAM	PF05340	DUF740	coord: 6..69 e-value: 7.5E-9 score: 34.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR34046:SF18	RAPIDLY ELICITED PROTEIN, PUTATIVE-RELATED	coord: 1..104
None	No IPR available	PANTHER	PTHR34046	OS06G0218800 PROTEIN	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g146430.m01	Csor.00g146430.m01	mRNA