Csor.00g145980 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g145980
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr16: 4009081 .. 4009311 (-)
RNA-Seq ExpressionCsor.00g145980
SyntenyCsor.00g145980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGGAAGAGGGCTGGTTTGGTGCTGGCAATGGTAGCCATGATGCTTATAATGCTATCAGTGAGTGGCATTGAAGATGAACTCATTCAACTTCCTTCAGAATTGGAACAAAATGAAGGTGCAGGAGGAAGGTGTCCCTCCGGCTCTTGCAGTTCGCATGCTGATTGTGGTTCCTGCAGATGCAAAGTAGTCTCCACTACACCCTTTCTCTATGCTAAATGTGTTTGA

mRNA sequence

ATGGGGAGGAAGAGGGCTGGTTTGGTGCTGGCAATGGTAGCCATGATGCTTATAATGCTATCAGTGAGTGGCATTGAAGATGAACTCATTCAACTTCCTTCAGAATTGGAACAAAATGAAGGTGCAGGAGGAAGGTGTCCCTCCGGCTCTTGCAGTTCGCATGCTGATTGTGGTTCCTGCAGATGCAAAGTAGTCTCCACTACACCCTTTCTCTATGCTAAATGTGTTTGA

Coding sequence (CDS)

ATGGGGAGGAAGAGGGCTGGTTTGGTGCTGGCAATGGTAGCCATGATGCTTATAATGCTATCAGTGAGTGGCATTGAAGATGAACTCATTCAACTTCCTTCAGAATTGGAACAAAATGAAGGTGCAGGAGGAAGGTGTCCCTCCGGCTCTTGCAGTTCGCATGCTGATTGTGGTTCCTGCAGATGCAAAGTAGTCTCCACTACACCCTTTCTCTATGCTAAATGTGTTTGA

Protein sequence

MGRKRAGLVLAMVAMMLIMLSVSGIEDELIQLPSELEQNEGAGGRCPSGSCSSHADCGSCRCKVVSTTPFLYAKCV
Homology
[Close]
BLAST of Csor.00g145980 vs. NCBI nr
Match: KAG6577332.1 (hypothetical protein SDJN03_24906, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148 bits (373), Expect = 1.02e-44
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MGRKRAGLVLAMVAMMLIMLSVSGIEDELIQLPSELEQNEGAGGRCPSGSCSSHADCGSC 60
          MGRKRAGLVLAMVAMMLIMLSVSGIEDELIQLPSELEQNEGAGGRCPSGSCSSHADCGSC
Sbjct: 1  MGRKRAGLVLAMVAMMLIMLSVSGIEDELIQLPSELEQNEGAGGRCPSGSCSSHADCGSC 60

Query: 61 RCKVVSTTPFLYAKCV 76
          RCKVVSTTPFLYAKCV
Sbjct: 61 RCKVVSTTPFLYAKCV 76

[Close]
BLAST of Csor.00g145980 vs. NCBI nr
Match: KAG6577331.1 (hypothetical protein SDJN03_24905, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 101 bits (252), Expect = 5.31e-26
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 0 

Query: 1  MGRKRAGLVLAMVAMMLIMLSVSGIEDELIQLPSELEQNEGAG----------------- 60
          MGRK++GLVLAM+AMMLIM+SVSGIEDELIQLPSELEQNEGA                  
Sbjct: 1  MGRKKSGLVLAMIAMMLIMVSVSGIEDELIQLPSELEQNEGAERLLDGVSRKMFKGLGSS 60

Query: 61 -GRCPSGSCSSHADCG-SCRCKVVSTTPFLYAKCV 76
           G+CPSG C+  + CG SC+C++VST+PF+Y+ CV
Sbjct: 61 MGKCPSGFCTRDSFCGRSCQCRIVSTSPFVYSTCV 95

The following BLAST results are available for this feature:
BLAST of Csor.00g145980 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g145980 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6577332.11.02e-44100.00hypothetical protein SDJN03_24906, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6577331.15.31e-2660.00hypothetical protein SDJN03_24905, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g145980 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g145980 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g145980.m01Csor.00g145980.m01mRNA