Csor.00g145540 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g145540
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Thioredoxin domain-containing protein
Location	Csor_Chr16: 4388748 .. 4391332 (+)
RNA-Seq Expression	Csor.00g145540
Synteny	Csor.00g145540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCTTCCGCCTTGGCTTCCACTGCTTTCTCCGGCCGTCGGAGCTCCGTCGCCCTCCCGCAGTACAGAGGCTTGAAGATCGGTCACAGTTTCACTTCCCAGTCTATAAGATCTGCGAGATCTAATGCCAGATTTGCTCAGCGTTCTGGAAGAATCGTCTGCGAAGCTCAGGAAACTGCTGCCATTGGTTGGGATTTTGTTCTGCAATTTTCTTTTTCTGTCTTTTTCTGTTGTTTGGAGGGTAGAAGAAAGGAAATTTTAACAATACTAGAAAGTTTGATGAATTTAAGAGCATGCTGTTAGTATCTACTGGTGTTTGGTTTGGTTTATATTCGCATGAAACTCATCGTGTCTCCAATTAGTAAACAATATGATAGAGCTCCACTAGAGTTAACTTATAAGCGTCAGCTTAAGGCACGTTTAACCTATTCAGTATATGCTTAATATAAATTAGAGAGAAAGGAAAGATAAAAGAAAGAATGAGATCAGTTGTTGGAGTGATGTTGACATGATATGACAAATCATTTTCTGTTTGAATTTATGTACTTGTCATATTTTTGTACTCTGATACCTGACGGATATATGGATGTTGCGTATTCCCATCCATGCACATGCTTGGATATGATGTAAATTACTGTGATGAATTTTGATGTCGAATGACTCTTCAAGTGCTTAAAAAAGTACTTTTGAGTGAAAAGAGATGCTTTTAAGCACTTAAAAAGCAATTCTAAAGAGCCTTAATTGGACCTTATAAATGTGTTTCAGTTTGAGCATTAAAATTGTTTACGAATCACTCCATTAACCATAAAGATCGGTCATATAGAGTTGTTTACACACATTTAGCTTCCAAATATTTTGATATGATATTGTTTTGAGCCAATATCAGGCCTGCTCCATACCTCTCCAGTGGAGGATTTCTGGGTTTGATGCTGTTAGAAGAGAGGTGCCTCCGGTACCAACTTAAGCAGAAAATGAGGGGAATGTACTGCATATTATTAAGGGTTCGTGTGTGGTATATATATATTATATGAGATTGGAGCAATTTTTTGTTTTGTTATGTCTTTAGTCATTGTTTTGGCTCCGGTCTCTAGGATGAATATATGTAAGGCCTTTTATATGATTCCCCCCCCCCCTTCCAGTTCGTTAATATATGTTATTACTTGAGAGGCTGAGATGATGCCCTAGGCAATCAGTAGACTCTCAATCGGTGAGTGTCAAACCTATTCAGTCAATGCACCCTTGACCGGGACCGAGATCTCTGACTGAAAGAGATGGTCTCTGGGCGGGAGGTTGTCACTTAGCATTAGGAGTAGTAGTTGCCAATTGAGAAGATGGTTTCTGCTGTGCCTAGGTCTTAATGATGCTACAGAGAGTGGTCAGTAAGGAGCTGGTCTGATATTGGCTCAATATGTTGGGAGAAAGTGTTCTAATTGTCTCTCTCCTGGTTCTGCCCAGTTCCGCCATCCCTCTCTTTTGTGTGTGTATGAGTGAGCCTGTTTCTTTATGTATCTTGGTTTGCATAGGAGCCAGTGTTTATCTTGTATGGCATGAAGTACATAATCATTTACAATAGGTACAACGTCGAAATTATAACATGCATGTGTTGGTGGTTGTTGTTCCTGCACGTTTTATTTTGATTGTTATCTTACATCATTGCTATGAAATAACAGCTGTTTAAGCATCAAAAGGTGTAAGAAATGTTGCATTTCAGGTACCTTTATATCCTATTACACACACTTATGCACATACACACACTTTGTCCGTGGTGTATATAGCTCAGAAGTATTGTCTAACTGCTTGTCAATTTTTGAAAAATGTAATTCAATTAGAGAGTTCCGACTGTTTTTATATTGGGGAGCTAACTTATTTCAATTTTTATTAGATCATGGGATGGGGGCATAGAAATTTTCTGTTTGAACCTTTCAACTGACTCTGAGTTCAGGTCTTTGTATCATTGGTTGTACTTTTTTTTTTTCTTGATCACTTGCTTTGATGTTGATATTAATCCTGGAGAGTCACAGTACTGGAATCATTTTCTAGTCTGATCATTATAGGAACTTGTTATCCATAAAATTATGCTTTAATCTATGTTCTGTTTTGACTCTTCTCTGCTGGCTACCTGATTCTTGGGTCAATAATATTACCTACACCTACTTTTTCTGTCTCTCGAACTTTCTTCTCCCCGAAAAGGGCCCTTGTTGAGCTTACAAGAAATCACATGTTTGTCGAATGTTTCAGTACCTGCTGCTTCAGAAGCTACCTGGGATTCACTGGTTCTTAAATCCGAATTACCCGTCCTAGTCGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCGATCGTTGACGAACTATCTAAACAGTATGCTGGTAAGTTCAAATTTTACAAGGTGGATACTGATAGCAACTCTGGTGTTGCATCCCGATATGGTATCAGAAGCATACCAACTGTCATTATCTTCAAAGATGGTGAGAAAAAGGAGGCAATAATAGGTGCAGTTCCCAAAGCAACTTTGACTGCCAGCATTGAAAAATTCTTGTAG

mRNA sequence

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCTTCCGCCTTGGCTTCCACTGCTTTCTCCGGCCGTCGGAGCTCCGTCGCCCTCCCGCAGTACAGAGGCTTGAAGATCGGTCACAGTTTCACTTCCCAGTCTATAAGATCTGCGAGATCTAATGCCAGATTTGCTCAGCGTTCTGGAAGAATCGTCTGCGAAGCTCAGGAAACTGCTGCCATTGTACCTGCTGCTTCAGAAGCTACCTGGGATTCACTGGTTCTTAAATCCGAATTACCCGTCCTAGTCGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCGATCGTTGACGAACTATCTAAACAGTATGCTGGTAAGTTCAAATTTTACAAGGTGGATACTGATAGCAACTCTGGTGTTGCATCCCGATATGGTATCAGAAGCATACCAACTGTCATTATCTTCAAAGATGGTGAGAAAAAGGAGGCAATAATAGGTGCAGTTCCCAAAGCAACTTTGACTGCCAGCATTGAAAAATTCTTGTAG

Coding sequence (CDS)

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCTTCCGCCTTGGCTTCCACTGCTTTCTCCGGCCGTCGGAGCTCCGTCGCCCTCCCGCAGTACAGAGGCTTGAAGATCGGTCACAGTTTCACTTCCCAGTCTATAAGATCTGCGAGATCTAATGCCAGATTTGCTCAGCGTTCTGGAAGAATCGTCTGCGAAGCTCAGGAAACTGCTGCCATTGTACCTGCTGCTTCAGAAGCTACCTGGGATTCACTGGTTCTTAAATCCGAATTACCCGTCCTAGTCGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCGATCGTTGACGAACTATCTAAACAGTATGCTGGTAAGTTCAAATTTTACAAGGTGGATACTGATAGCAACTCTGGTGTTGCATCCCGATATGGTATCAGAAGCATACCAACTGTCATTATCTTCAAAGATGGTGAGAAAAAGGAGGCAATAATAGGTGCAGTTCCCAAAGCAACTTTGACTGCCAGCATTGAAAAATTCTTGTAG

Protein sequence

MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL

Homology

[Close]

BLAST of Csor.00g145540 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-47
Identity = 102/191 (53.40%), Postives = 133/191 (69.63%), Query Frame = 0


Query: 1   MATVLDSLTL----------PCSSALASTAFSGRRSSVA-LPQYRGLKIGHSFTSQSIRS 60
           MA++LDS+T+            SS+ A+ + S RR S A   ++RGLK   S  +QS   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFAQRSGRIVCEAQETAAI---VPAASEATWDSLVLKSELPVLVEFWAPWCGPCR 120
             +      R GRI CEAQ+T A    VP  S++ W + VL+S++PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPK 178
           MIHPIVD+L+K +AGKFKFYK++TD +   A+RYGIRS+PTVIIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

[Close]

BLAST of Csor.00g145540 vs. ExPASy Swiss-Prot
Match: O48737 (Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g03680 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.8e-42
Identity = 82/158 (51.90%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 20  AFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRSGRIVCEAQETAAIVPAASE 79
           +FS R+    LP+  GL+     T  S+ S   N+R ++    ++CEAQ+TA  +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSNSGVASR 139
           +TWDSLVLK++ PV V+FWAPWCGPC+MI PIV+EL+++YAG+FKFYK++TD +     +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           YG+RSIPT++IF +GEKK+ IIGAV K TL  SI KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of Csor.00g145540 vs. ExPASy Swiss-Prot
Match: Q9SEU8 (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 3.1e-42
Identity = 85/173 (49.13%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 5   LDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRSGRIV 64
           L S T   SS+ ++++ S RR    LP+  GL+I  S +  S+ S     R ++    +V
Sbjct: 14  LRSETRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVV 73

Query: 65  CEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFK 124
           CEAQET   +   +++TWDSLVLK+  PV+V+FWAPWCGPC+MI P+V++L++ Y GK K
Sbjct: 74  CEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIK 133

Query: 125 FYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           FYK++TD +     +YG+RSIPT++IF  GEKK+ IIGAVPK TLT+S++KFL
Sbjct: 134 FYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Csor.00g145540 vs. ExPASy Swiss-Prot
Match: Q9XGS0 (Thioredoxin M-type, chloroplastic OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.0e-42
Identity = 82/164 (50.00%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 15  ALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQ-RSGRIVCEAQETAAI 74
           +L S        +V+L   +   +G   T  S+ S   N+R ++ R G I+CEAQ+TA  
Sbjct: 13  SLRSEMMIASSKTVSLSTRQMFSVGGLRTRVSLSSVSKNSRASRLRRGGIICEAQDTATG 72

Query: 75  VPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSN 134
           +P  +++TW+SLVLK++ PV+V+FWAPWCGPC+MI PIV+EL++QY GK KF+K++TD +
Sbjct: 73  IPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDS 132

Query: 135 SGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
                +YG+RSIPT++IF  GEKK+ IIGAVPK TL  SI+KFL
Sbjct: 133 PATPGKYGVRSIPTIMIFVKGEKKDTIIGAVPKTTLATSIDKFL 176

[Close]

BLAST of Csor.00g145540 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-41
Identity = 92/184 (50.00%), Postives = 128/184 (69.57%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAL--ASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRS---ARSNAR 60
           MA+ L + T  CSS L  AS + S  R   A+P  RG++       Q++R+      N R
Sbjct: 1   MASALAASTAVCSSPLASASASASSARRLRAVPPSRGIRY------QALRADSGFAGNRR 60

Query: 61  FAQRSGRIVC--EAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVD 120
              R   +VC  + Q+T+  VP  +++TW SLV++SELPVLV +WA WCGPC+MI P+V 
Sbjct: 61  GGGRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVG 120

Query: 121 ELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASI 178
           +LSK+Y GK K YK++TD N  +AS+YG+RSIPT++IFK+GEKK+A+IGAVP++TL ASI
Sbjct: 121 KLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASI 178

[Close]

BLAST of Csor.00g145540 vs. NCBI nr
Match: XP_022984702.1 (uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharacterized protein LOC111810091 [Cucurbita pepo subsp. pepo] >KAG6577376.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345 bits (885), Expect = 1.43e-119
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
           GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177
           GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of Csor.00g145540 vs. NCBI nr
Match: XP_022929416.1 (uncharacterized protein LOC111435994 [Cucurbita moschata] >KAG7027688.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343 bits (879), Expect = 1.18e-118
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHS TSQSIRSARSNARFAQRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
           GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177
           GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of Csor.00g145540 vs. NCBI nr
Match: XP_038905006.1 (thioredoxin 1-like [Benincasa hispida] >XP_038905007.1 thioredoxin 1-like [Benincasa hispida])

HSP 1 Score: 311 bits (796), Expect = 5.31e-106
Identity = 156/177 (88.14%), Postives = 167/177 (94.35%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFSGRRSS+ALPQ RGLKI HSFTS SIRSARSNARF  RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSLALPQCRGLKIAHSFTSHSIRSARSNARFPHRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
             IVCEAQETAAIVPAASEATW S+V++S+LPVLVEFWAPWCGPCRMIHPI+DELSK+Y 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWKSMVIESKLPVLVEFWAPWCGPCRMIHPIIDELSKEYT 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177
           GKFKFYKVDTD+NS +AS+YGIRSIPTVIIFKDGEKKEAIIGAVPKATLTAS+EKFL
Sbjct: 121 GKFKFYKVDTDNNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 177

[Close]

BLAST of Csor.00g145540 vs. NCBI nr
Match: XP_004133707.1 (uncharacterized protein LOC101204508 [Cucumis sativus] >KGN56239.1 hypothetical protein Csa_010560 [Cucumis sativus])

HSP 1 Score: 296 bits (758), Expect = 3.29e-100
Identity = 147/176 (83.52%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFS RR+S+ LPQ RGLKI +SFTS S+RSARSNARF  RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
             IVCEAQETAAIVPAASEATW+SLV +S+LPV+VEFWAPWCGPCRM+HPI+D+LSK+Y 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKF 176
           GKFKFYKVDTD+N  +ASRYGIRSIPTVIIFKDGEKKEAIIGAVPK TLTAS+EKF
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

[Close]

BLAST of Csor.00g145540 vs. NCBI nr
Match: XP_022142885.1 (uncharacterized protein LOC111012890 [Momordica charantia])

HSP 1 Score: 289 bits (739), Expect = 2.67e-97
Identity = 141/178 (79.21%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALAS-TAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQR 60
           MATVLDSLTLPCSSA +S ++FSGRR+S+ALPQ+RGLKI HSFTS SIRSARS++RFA R
Sbjct: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSLALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60

Query: 61  SGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQY 120
           SGRIVCEAQET A+VPAA+EATW SLV++SELPVLVEFWAPWCGPCRMIHP++D LS +Y
Sbjct: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESELPVLVEFWAPWCGPCRMIHPLIDALSSEY 120

Query: 121 AGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177
           +G+FKFYKV+TD N+ +ASRYGIRSIPTVIIFK GEKKEA+IGAVPK+TL AS++KFL
Sbjct: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 178

[Close]

BLAST of Csor.00g145540 vs. ExPASy TrEMBL
Match: A0A6J1J2W9 (uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 6.93e-120
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
           GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177
           GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of Csor.00g145540 vs. ExPASy TrEMBL
Match: A0A6J1EN29 (uncharacterized protein LOC111435994 OS=Cucurbita moschata OX=3662 GN=LOC111435994 PE=4 SV=1)

HSP 1 Score: 343 bits (879), Expect = 5.69e-119
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHS TSQSIRSARSNARFAQRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
           GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177
           GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of Csor.00g145540 vs. ExPASy TrEMBL
Match: A0A0A0L5C6 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 1.59e-100
Identity = 147/176 (83.52%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60
           MATVLDSLTLPCSSALASTAFS RR+S+ LPQ RGLKI +SFTS S+RSARSNARF  RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
             IVCEAQETAAIVPAASEATW+SLV +S+LPV+VEFWAPWCGPCRM+HPI+D+LSK+Y 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKF 176
           GKFKFYKVDTD+N  +ASRYGIRSIPTVIIFKDGEKKEAIIGAVPK TLTAS+EKF
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

[Close]

BLAST of Csor.00g145540 vs. ExPASy TrEMBL
Match: A0A6J1CM67 (uncharacterized protein LOC111012890 OS=Momordica charantia OX=3673 GN=LOC111012890 PE=4 SV=1)

HSP 1 Score: 289 bits (739), Expect = 1.29e-97
Identity = 141/178 (79.21%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALAS-TAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQR 60
           MATVLDSLTLPCSSA +S ++FSGRR+S+ALPQ+RGLKI HSFTS SIRSARS++RFA R
Sbjct: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSLALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60

Query: 61  SGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQY 120
           SGRIVCEAQET A+VPAA+EATW SLV++SELPVLVEFWAPWCGPCRMIHP++D LS +Y
Sbjct: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESELPVLVEFWAPWCGPCRMIHPLIDALSSEY 120

Query: 121 AGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177
           +G+FKFYKV+TD N+ +ASRYGIRSIPTVIIFK GEKKEA+IGAVPK+TL AS++KFL
Sbjct: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 178

[Close]

BLAST of Csor.00g145540 vs. ExPASy TrEMBL
Match: A0A6J1FMY5 (uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446910 PE=4 SV=1)

HSP 1 Score: 280 bits (717), Expect = 2.81e-94
Identity = 137/177 (77.40%), Postives = 158/177 (89.27%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60
           MATVLDSL LP SS LAST FSGRR+S+ALP+YR LK+GHSFTS SI+SARSNARF  RS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120
           GR+VCE QET++IVP+ASEATW S V++S +PVLVEFWAPWCGPCRMIHP+VDELS +YA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177
           GKFKFYKV+TD  +G+AS+  IRSIPTVIIFK+GEKKEAIIGAVPK TLT S++KFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of Csor.00g145540 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-48
Identity = 102/191 (53.40%), Postives = 133/191 (69.63%), Query Frame = 0


Query: 1   MATVLDSLTL----------PCSSALASTAFSGRRSSVA-LPQYRGLKIGHSFTSQSIRS 60
           MA++LDS+T+            SS+ A+ + S RR S A   ++RGLK   S  +QS   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNARFAQRSGRIVCEAQETAAI---VPAASEATWDSLVLKSELPVLVEFWAPWCGPCR 120
             +      R GRI CEAQ+T A    VP  S++ W + VL+S++PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPK 178
           MIHPIVD+L+K +AGKFKFYK++TD +   A+RYGIRS+PTVIIFK GEKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

[Close]

BLAST of Csor.00g145540 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-43
Identity = 82/158 (51.90%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 20  AFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRSGRIVCEAQETAAIVPAASE 79
           +FS R+    LP+  GL+     T  S+ S   N+R ++    ++CEAQ+TA  +P  ++
Sbjct: 27  SFSTRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVND 86

Query: 80  ATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSNSGVASR 139
           +TWDSLVLK++ PV V+FWAPWCGPC+MI PIV+EL+++YAG+FKFYK++TD +     +
Sbjct: 87  STWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQ 146

Query: 140 YGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           YG+RSIPT++IF +GEKK+ IIGAV K TL  SI KFL
Sbjct: 147 YGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of Csor.00g145540 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 172.9 bits (437), Expect = 2.2e-43
Identity = 85/173 (49.13%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 5   LDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRSGRIV 64
           L S T   SS+ ++++ S RR    LP+  GL+I  S +  S+ S     R ++    +V
Sbjct: 14  LRSETRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVV 73

Query: 65  CEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYAGKFK 124
           CEAQET   +   +++TWDSLVLK+  PV+V+FWAPWCGPC+MI P+V++L++ Y GK K
Sbjct: 74  CEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIK 133

Query: 125 FYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 178
           FYK++TD +     +YG+RSIPT++IF  GEKK+ IIGAVPK TLT+S++KFL
Sbjct: 134 FYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Csor.00g145540 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 5.0e-27
Identity = 57/141 (40.43%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 41  SFTSQSIRSARSNARFAQRSGRI----VCEAQETAAIVPAASEATWDSLVLKSELPVLVE 100
           SF+ +S+R +   +  +  + R+    +C     AA V   ++ +W+  VLKSE PVLVE
Sbjct: 34  SFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAEV---TQRSWEDSVLKSETPVLVE 93

Query: 101 FWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEK 160
           F+  WCGPCRM+H I+DE++  YAGK   Y ++ D++  VA  Y I+++P V++FK+GEK
Sbjct: 94  FYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEK 153

Query: 161 KEAIIGAVPKATLTASIEKFL 178
           +E+I+G +PK    ++IE+ L
Sbjct: 154 RESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of Csor.00g145540 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 8.5e-27
Identity = 56/141 (39.72%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 41  SFTSQSIRSARSNARFAQRSGRI----VCEAQETAAIVPAASEATWDSLVLKSELPVLVE 100
           SF+ +S+R +   +  +  + R+    +C     AA     ++ +W+  VLKSE PVLVE
Sbjct: 34  SFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAA--AEVTQRSWEDSVLKSETPVLVE 93

Query: 101 FWAPWCGPCRMIHPIVDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEK 160
           F+  WCGPCRM+H I+DE++  YAGK   Y ++ D++  VA  Y I+++P V++FK+GEK
Sbjct: 94  FYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEK 153

Query: 161 KEAIIGAVPKATLTASIEKFL 178
           +E+I+G +PK    ++IE+ L
Sbjct: 154 RESIMGTMPKEFYISAIERVL 172

The following BLAST results are available for this feature:

BLAST of Csor.00g145540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU6	1.5e-47	53.40	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]
O48737	1.8e-42	51.90	Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g03680 PE=1 ...	[more]
Q9SEU8	3.1e-42	49.13	Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2	[more]
Q9XGS0	7.0e-42	50.00	Thioredoxin M-type, chloroplastic OS=Brassica napus OX=3708 PE=1 SV=1	[more]
Q7X8R5	1.6e-41	50.00	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]

BLAST of Csor.00g145540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984702.1	1.43e-119	100.00	uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharac...	[more]
XP_022929416.1	1.18e-118	99.44	uncharacterized protein LOC111435994 [Cucurbita moschata] >KAG7027688.1 Thioredo...	[more]
XP_038905006.1	5.31e-106	88.14	thioredoxin 1-like [Benincasa hispida] >XP_038905007.1 thioredoxin 1-like [Benin...	[more]
XP_004133707.1	3.29e-100	83.52	uncharacterized protein LOC101204508 [Cucumis sativus] >KGN56239.1 hypothetical ...	[more]
XP_022142885.1	2.67e-97	79.21	uncharacterized protein LOC111012890 [Momordica charantia]	[more]

BLAST of Csor.00g145540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2W9	6.93e-120	100.00	uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904...	[more]
A0A6J1EN29	5.69e-119	99.44	uncharacterized protein LOC111435994 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]
A0A0A0L5C6	1.59e-100	83.52	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920...	[more]
A0A6J1CM67	1.29e-97	79.21	uncharacterized protein LOC111012890 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1FMY5	2.81e-94	77.40	uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Csor.00g145540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15360.1	1.0e-48	53.40	thioredoxin M-type 4	[more]
AT1G03680.1	1.3e-43	51.90	thioredoxin M-type 1	[more]
AT4G03520.1	2.2e-43	49.13	Thioredoxin superfamily protein	[more]
AT2G15570.1	5.0e-27	40.43	Thioredoxin superfamily protein	[more]
AT2G15570.2	8.5e-27	39.72	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 93..101 score: 64.57 coord: 141..152 score: 42.59 coord: 101..110 score: 61.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 74..177 e-value: 7.4E-36 score: 124.4
None	No IPR available	PANTHER	PTHR45663:SF24	THIOREDOXIN-1-LIKE	coord: 10..177
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 10..177
None	No IPR available	CDD	cd02947	TRX_family	coord: 80..174 e-value: 2.17252E-41 score: 132.682
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 78..176 e-value: 7.0E-37 score: 123.6
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 77..174 e-value: 5.4E-31 score: 106.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 68..177 score: 14.924197
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 94..112
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 74..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g145540.m01	Csor.00g145540.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity