Csor.00g144120 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g144120
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr03: 9272704 .. 9273130 (-)
RNA-Seq ExpressionCsor.00g144120
SyntenyCsor.00g144120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTCCTAGTCCTCATCTTATCAATGATGATATTGAGCTACACTTGCTCAGTGACTTCAAGAAGGATTGCTTTGGCAGGGTTTCATGAACAAGGAAACCAACATTTCTTAAAGCAAGCAAAAACGGCTGAAGAAAATAAAAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCTTTGCCTAGAGAGTACTTCAACGAGAAGGGTGGAGCTTCGCAAGGAAATGACAATGGAAGTGGGTAACTATTGCAAATCTAGAAGGCTAATATGCACTATTTGATATAGCATACCAGAAGATCCTAGTTTTTTTTGCTCTAGCTGTTGATGTTCCTATGTTCCAAGGAGTAGGCAGGGTACGAGGGAAGAGGGAGGTGCGCTTTCCTCCAGTAATCATACCTTCTGCTAG

mRNA sequence

ATGAAGTTCCTAGTCCTCATCTTATCAATGATGATATTGAGCTACACTTGCTCAGTGACTTCAAGAAGGATTGCTTTGGCAGGGTTTCATGAACAAGGAAACCAACATTTCTTAAAGCAAGCAAAAACGGCTGAAGAAAATAAAAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCTTTGCCTAGAGAGTACTTCAACGAGAAGGGTGGAGCTTCGCAAGGAAATGACAATGGAAGTGGGAGTAGGCAGGGTACGAGGGAAGAGGGAGGTGCGCTTTCCTCCAGTAATCATACCTTCTGCTAG

Coding sequence (CDS)

ATGAAGTTCCTAGTCCTCATCTTATCAATGATGATATTGAGCTACACTTGCTCAGTGACTTCAAGAAGGATTGCTTTGGCAGGGTTTCATGAACAAGGAAACCAACATTTCTTAAAGCAAGCAAAAACGGCTGAAGAAAATAAAAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCTTTGCCTAGAGAGTACTTCAACGAGAAGGGTGGAGCTTCGCAAGGAAATGACAATGGAAGTGGGAGTAGGCAGGGTACGAGGGAAGAGGGAGGTGCGCTTTCCTCCAGTAATCATACCTTCTGCTAG

Protein sequence

MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRKSNFKHPESGISNHHSLPREYFNEKGGASQGNDNGSGSRQGTREEGGALSSSNHTFC
Homology
BLAST of Csor.00g144120 vs. NCBI nr
Match: KAG6604413.1 (hypothetical protein SDJN03_05022, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (513), Expect = 4.14e-65
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0

Query: 1   MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRKSNFKHPESG 60
           MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRKSNFKHPESG
Sbjct: 1   MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRKSNFKHPESG 60

Query: 61  ISNHHSLPREYFNEKGGASQGNDNGSGSRQGTREEGGALSSSNHTFC 107
           ISNHHSLPREYFNEKGGASQGNDNGSGSRQGTREEGGALSSSNHTFC
Sbjct: 61  ISNHHSLPREYFNEKGGASQGNDNGSGSRQGTREEGGALSSSNHTFC 107

BLAST of Csor.00g144120 vs. NCBI nr
Match: KAE8647398.1 (hypothetical protein Csa_003831 [Cucumis sativus])

HSP 1 Score: 126 bits (316), Expect = 8.02e-35
Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 0

Query: 1  MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRKSNFKHPESG 60
          MKFLVLILSMMILSYTCS TSRRIAL G H QGNQ+F KQA+  EEN SRKSNFKHPESG
Sbjct: 1  MKFLVLILSMMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNEKGGASQGNDNGSG 87
          +SNHHSLPREYFN     SQGNDN +G
Sbjct: 61 VSNHHSLPREYFNN----SQGNDNDNG 83

BLAST of Csor.00g144120 vs. NCBI nr
Match: KAA0047240.1 (hypothetical protein E6C27_scaffold908G00330 [Cucumis melo var. makuwa] >TYK05876.1 hypothetical protein E5676_scaffold432G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (311), Expect = 1.45e-34
Identity = 69/87 (79.31%), Postives = 72/87 (82.76%), Query Frame = 0

Query: 1  MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRKSNFKHPESG 60
          MKFLVLILS MILSYTCS TSRRIAL G H QGNQ+F KQA+  EEN SRKSNFKHPESG
Sbjct: 1  MKFLVLILSTMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNEKGGASQGNDNGSG 87
          ISNHHSLPREYFN     SQGNDN +G
Sbjct: 61 ISNHHSLPREYFNN----SQGNDNDNG 83

BLAST of Csor.00g144120 vs. NCBI nr
Match: POO01696.1 (hypothetical protein TorRG33x02_024730 [Trema orientale])

HSP 1 Score: 58.5 bits (140), Expect = 1.50e-08
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 1  MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRK-SNFKHPES 60
          MK   LIL +M ++ TC     R  L G + Q  ++ L + KT E NK  K S+ K+PE 
Sbjct: 1  MKVAALILILM-MATTCLAAPLRGMLGGIYGQEQRYRLGKGKTIEGNKMEKMSSVKYPER 60

Query: 61 GISNHHSLPREYFNEKGGASQG 81
           I+NHHS+PR+Y+N+KGG SQG
Sbjct: 61 NINNHHSIPRQYYNDKGGNSQG 81

BLAST of Csor.00g144120 vs. NCBI nr
Match: PON60348.1 (hypothetical protein PanWU01x14_153340 [Parasponia andersonii])

HSP 1 Score: 56.6 bits (135), Expect = 8.47e-08
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0

Query: 11 MILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRK-SNFKHPESGISNHHSLPR 70
          ++++ TC    RR  LAG + Q  ++ L + KT E NK  K S+ K+ E  I+NHHS+PR
Sbjct: 10 LMMATTCLAAPRRAMLAGIYGQEQRYRLGKGKTIEGNKMEKMSSVKYAERKINNHHSIPR 69

Query: 71 EYFNEKGGASQG 81
          +Y+N+KGG  QG
Sbjct: 70 QYYNDKGGNYQG 81

BLAST of Csor.00g144120 vs. ExPASy TrEMBL
Match: A0A0A0KK82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446330 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 1.22e-35
Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 0

Query: 1  MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRKSNFKHPESG 60
          MKFLVLILSMMILSYTCS TSRRIAL G H QGNQ+F KQA+  EEN SRKSNFKHPESG
Sbjct: 1  MKFLVLILSMMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNEKGGASQGNDNGSG 87
          +SNHHSLPREYFN     SQGNDN +G
Sbjct: 61 VSNHHSLPREYFNN----SQGNDNDNG 83

BLAST of Csor.00g144120 vs. ExPASy TrEMBL
Match: A0A5A7TVP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00070 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 7.03e-35
Identity = 69/87 (79.31%), Postives = 72/87 (82.76%), Query Frame = 0

Query: 1  MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRKSNFKHPESG 60
          MKFLVLILS MILSYTCS TSRRIAL G H QGNQ+F KQA+  EEN SRKSNFKHPESG
Sbjct: 1  MKFLVLILSTMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNEKGGASQGNDNGSG 87
          ISNHHSLPREYFN     SQGNDN +G
Sbjct: 61 ISNHHSLPREYFNN----SQGNDNDNG 83

BLAST of Csor.00g144120 vs. ExPASy TrEMBL
Match: A0A2P5FV74 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_024730 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.27e-09
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 1  MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRK-SNFKHPES 60
          MK   LIL +M ++ TC     R  L G + Q  ++ L + KT E NK  K S+ K+PE 
Sbjct: 1  MKVAALILILM-MATTCLAAPLRGMLGGIYGQEQRYRLGKGKTIEGNKMEKMSSVKYPER 60

Query: 61 GISNHHSLPREYFNEKGGASQG 81
           I+NHHS+PR+Y+N+KGG SQG
Sbjct: 61 NINNHHSIPRQYYNDKGGNSQG 81

BLAST of Csor.00g144120 vs. ExPASy TrEMBL
Match: A0A2P5CH57 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153340 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.10e-08
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0

Query: 11 MILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRK-SNFKHPESGISNHHSLPR 70
          ++++ TC    RR  LAG + Q  ++ L + KT E NK  K S+ K+ E  I+NHHS+PR
Sbjct: 10 LMMATTCLAAPRRAMLAGIYGQEQRYRLGKGKTIEGNKMEKMSSVKYAERKINNHHSIPR 69

Query: 71 EYFNEKGGASQG 81
          +Y+N+KGG  QG
Sbjct: 70 QYYNDKGGNYQG 81

BLAST of Csor.00g144120 vs. ExPASy TrEMBL
Match: A0A7N2M795 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.71e-06
Identity = 31/81 (38.27%), Postives = 51/81 (62.96%), Query Frame = 0

Query: 1  MKFLVLILSMMILSYTCSVTSRRIALAGFHEQGNQHFLKQAKTAEENKSRKSNFKHPESG 60
          MK +VL L +M++S +C    RR  L G + Q   +  ++ K  E++K  +S  ++P+S 
Sbjct: 1  MKLVVLFLVIMVVSSSCLAVPRRGMLGGIYGQEQLYHAQKRKAMEDSKE-ESKVEYPDSS 60

Query: 61 ISNHHSLPREYFNEKGGASQG 81
          I+NHH++PR+ FN   G+SQG
Sbjct: 61 INNHHTIPRQNFNSGDGSSQG 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6604413.14.14e-65100.00hypothetical protein SDJN03_05022, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8647398.18.02e-3579.31hypothetical protein Csa_003831 [Cucumis sativus][more]
KAA0047240.11.45e-3479.31hypothetical protein E6C27_scaffold908G00330 [Cucumis melo var. makuwa] >TYK0587... [more]
POO01696.11.50e-0846.34hypothetical protein TorRG33x02_024730 [Trema orientale][more]
PON60348.18.47e-0844.44hypothetical protein PanWU01x14_153340 [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
A0A0A0KK821.22e-3579.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446330 PE=4 SV=1[more]
A0A5A7TVP97.03e-3579.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A2P5FV747.27e-0946.34Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_024730 PE=4 SV... [more]
A0A2P5CH574.10e-0844.44Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153340 PE... [more]
A0A7N2M7951.71e-0638.27Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..107
NoneNo IPR availablePANTHERPTHR36040:SF5BNAC01G24170D PROTEINcoord: 1..87
NoneNo IPR availablePANTHERPTHR36040OS04G0188500 PROTEINcoord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g144120.m01Csor.00g144120.m01mRNA