Csor.00g144040 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g144040
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptioncell division cycle protein 48 homolog
LocationCsor_Chr03: 9223927 .. 9228532 (+)
RNA-Seq ExpressionCsor.00g144040
SyntenyCsor.00g144040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTTCAGCATTGCTTCTGTTGTCTTTTTCAACAATTTAGACACTTGTACTGCCACTTCTCTTGATGCCAGAATATGGTAATACTGCCGACAAGAAAGGATGTCCATTGGGACTTCACGTTTTATGTGAATGAATGTTTAGCTTTGTTGTGCTTCATGAACTAAATTTGCATAAGATATTCAAGTCAATCTTTGCAGCATATATAGGTGGAAGACAGGATGATGTTCAAGCCAATCTTAATGAAACCAAGAGGCTACTGGGTTTCTTTTTTCAAGGTAAGTACTGAAAAATTGTCACTCTTGGTTATTATATCTTCTTGTATTACCTGCTTGAAGTGAAAGATCAAATTCTTCCTTATTTTCTTCATGGTAAAGGTGTGAGAAGAAAGTATCTTTTTCTCTATTTTTTACAGTACAGAGATTTGATTTGAGCATTTTGTTACTTAGATTCACCGAATTCCCTTTTGTCTAGGAAGCCTAGTGCACGTTTCTGAATGATTTGGTTTGTCTGTAAGAGTAAAACGTTGAGGTTCCGGTGTAGAAAGAAAATGAAACTGCCTCAGACCATCTGCATCAAGAACGAAAAATGATGTAATGAATGTTCTTTGTAAATGCATGGGAAGTTTAGATAGATGAAAACCGAATATTTACTGTATTTTTTCAGAAAAAAAGAGCCGAAACGAGCCTCGACTGTTGAAGCGTCATAAGATCTCGCATATATATGCCTGTTTATTATTATTTTTCTTGTATGGCTTAAATATTGTGTTTGCTTTCTTCCACATTGGAGCCGTCATTCCAGTTGTCTGGAAATTGATTATTGATCGTCTCAATGTCGTCTGGAAAGTGATTATCGATTTAGTTGTTGAATTTTGGATGAGGAAAGCATTTGATGCACAAGTTTTAAAAGGTTCTCATTGAATTGTTGTATATGGAAGAAGTAAAATGTTATGCATATTTTTTCTGCTTTATAATTGTTCATAGCTTCCACAATTGGCACTTCTCTTCCTCCATTAAACTGCCACCTCCATTGCTATGATTTGTTGTTTAGATCCTTTGCCCTGCTGGTTTTAATGTGTCTTCTTCGTTGGGCAAACACTCCTACAGTACAAGCTTTCCCCAGACTACTTGATCGAGGCTTTGGCTAAATAAGCTTATGAAATGTTTCCCAAGCTTGGCCCTTAGCGACCATACAATCAAGCTCGTCGATCTCGTCGATCCTACTGAACGATGCTGAGCCGACCATAGGGCAGTTTAAAGTTTGGCCTTGGTGTGCAAGCCGCCCTATGCCACCATTTATCCGGGTTTTGAAACAATCTTTTGATTCTGAAACTTTATGATCTCAGCCTGATGATGTTGAACTAAGTTTAGTTTTCTTGTTTGATAATCAATTATAGGATCTTCTCCTTGCTATATTTTGTGGCTTATGTGCATTTAGGTGACAAATTGGACACATTCTCACGAAAGAGTTGCAGGGCTTTGTACTACAGAAAACGTCGTATATAAGATCTAGTTATTACCGGGCGAAAGAAATTGCAATGATAATAAATGTTTCATCTATTTAGGTAGGATGAAATTTATTTTATATTCTAAAAAATATATTTTAAGAAAGAGATTTTAATATCTTATTTCAAGACGGACTAAAAATCTCTCTTAACTTTAAAACATATTTCTCTTAAAAAAAAAAAAAAATCTTATAACTATTTTTATTTTTTTATTTAATTCAGTTTCAAATTAGATAATGTTTTTAATCTCAAATAGGTCCTAAAATGAAACGAATAGGTATAATTTGATTCTTTCTTATCTTTCTAGCTTTATAGCTTTATGTATTTTTTAATTTTCAAATATAAATTTGACATTTTTCACATTTTTTTTTTATTTTTATGTTTTTGAATTGTAATGGTAACTTTTATTCCAATTATATTTTTTTAACACTTGCTTTATTTTAATAAATGTTAAACTTTGTTAACATAAATATGTGCTTTAATTCGTTTAAAATATTATAATTTTTATTTTAAAAAACATCAAAATATGTAAATTTGTTTGAATAAAGGATAATATATTTTATTTTTATTTAATTTTTTTAAAAGTAATTCTGAAAGAAATTATTAACCTTTTCCATTGTAAAAATACTTTCTGTACTTTTTTTAATAGCTTAAATACATTATTTAAAAAAAAAAAAAAAAAAATTGAAGGATATTAAGGAGAAAATTCCATAATTTGGGTATACAACCTTCCTCTCTTAAGAAGAAAAGGAGCAAACCTATGGCATAAATGTCATATCTCAGCTTATCTGAGCTCAGATCTTTCCAGATACATTCCATAGCCATTTCCCTTCCATCTTGCAGTCGCCTGTTGTCTTCTGCTCCGCCATCGACATGGCGAATCAAGCTGAATCCTCCGATGCGTAAGCCCTATCTCCAATTTCCCAGATCCCCGTTCTAATTTATTTCACCCTTTTCCATTTCGTGTTTTTTGAGATGAATATTTTCCGTTCTGATTGTTCGTTTGTTGTCTGATTCCGTTCTCAATTCGTTTTTTTTATTTCGTTCTTCCAGTAAGGGTGCCAAGAGGGATTTTAGTACCGCGATTCTGGAGCGTAAGAAAGCCGCGAACCGGCTTGTTGTTGATGAGGCCACCAATGATGACAACTCGGTGGTTGCGCTTCACCCTGACACTATGGAGAAGCTTCAACTCTTCCGTGGCGACACGATCTTGATTAAGGTCAGATGTTATTCTCGTTTTTTTTTTTTTAAAAAAAAAGTTTTTATCTTTCGTTAACATTTCTTTGACATATTTATTGTTCATCGAGTTAGGTTTTTTAAAATGTTTTTGCCCGAAGTGATGTTGCAAAATTGTGTAGGATCGGGGAGGTTTTCTCTTCTCCTTTCGGAATGTGCGAATCTTTCCATTTTATTTTATTCCCAATTTAGACTAATTGGCGGTTTTGTATTTAGGATTGGTGAATTGAGCACGTTTTGATGTGTGGATAAGATGTCGTTGCTAGTTCTTCTAGGTGACATTTTCTTGACTGGTTTGGAAAGTTTGACTTTGTGGACTTTGTTGTTGTTTTGAAGTTTGGATTGAGTTTTCATAGCTTGAGGACGTGAATGAGTTACTTTATATAGCTCATGTTTCATGTCTGATCTGTGAGTTTGAGATATATGAATGTTATGAAAAGCCTAGAAGATGAGTTTCAAAAATCTGTGTAATTTTATTATTTCAACACTTGAATTAGCAACATGTAATAAGTAAACTCACATATCAAATAGAGCTTCTAGTATAAAAACCACACCTATGAATCCAAAACCCCTAGTCCAAATGCCCTTTTAGTCTTAACCTCTCTCTCTCTCTCCACCCGCTAAGTAGAATATATGCCTATCCAACTACATTACAGGATGAACACACTTTTAATGCAACTCGCACAGTAATTTTATTTGCTCGATGTTTCTCAGAGCTGTGTTTCTTTACACAGTAAGAACGGTGACACCCTGGATTGGAATAGTGGATTTGCACTGCCCATTTGCACCATCACTTTTTTTTTTTTATTGTGTGCAAATTCTCAATCTAATAACTTAATGACTGTATTAAAGTAGCAGTAGTAGCCTATAGCTAAAATTGGAAAAAGATAATTTCACCTATTTGTTCGTTAAAAAAATTCCAATTCTTTCTTACTTTCTCCTTGGGCAAAATTCTGCTAGCCGTTCTCAACATTTGTACCATGATTAAAAAAATCAGATCCTAAACAAACATTGGAGAAAACTTGCATGGAGGGTGGAAGGAGGAAGGAGTTTTTTGAACTGAATCAGGGCTTCTCTTTGTTTGTGAAAAGTTGGGTTTTGTCTTTTTTCTTGTGGGTACATTTTGACTATGCAAGGCATAGGTCTCTTCTAAGTGATGCGCAAGTTCCCTCTGAAGATCTTGTAATCATTGCTTTCTGCGCTGCTGGACCAACTTTTGAAATATTAGTTTTAACCCGTGGCCTTTTGCTCATCTAGAGGCAATCTTTTTAAGCAGTCTTTAGTGGGACATTTATCATAATGTAGAGTCAAGTCAAGTTATTTCTCAATTTTCCTTTGTTCTTGAAAGGAGGGGATAGATGTCTCTTGCTTCCCTTCTCCTCGTCCATTTTGGTTTTAATAAATTTCTTAGAAAAAATGCAGCTTTCTCATACCCACCACTTGAGGTCATTCTTGAATTACTTGCCAGATTTTGTTTGTAACTGTATCATTTGTCTTCCTTCTGGAGTTTAGGGGAAGAAAAGGAAGGATACAATCTGCATTGCTCTTGCCGATGACACGTGTGATGAGCCAAAAATAAGAATGAACAAGGTTGTGCGAAGCAACCTTCGTGTCAGGCTTGGAGATGTTGTTTCTGTGCATCAATGTGCTGATGTTAAATATGGAAAGCGGGTACACATTCTTCCAGTCGACGACACTATTGAAGGTGTCACCGGGAATCTTTTTGATGCATACTTGAAACGTGAGATTCTATCCCTGATCTATGTACTTCCCCTGATTTGTCTCTTTCTTCTTGTATGATTAGATTATGATGATATCATTTCTGGCAATGTGCTGGTTGCTCAGACATTTTTGTTGACTTTGTGA

mRNA sequence

ATGCCCTTCAGCATTGCTTCTGTTGTCTTTTTCAACAATTTAGACACTTGTACTGCCACTTCTCTTGATGCCAGAATATGCTTTGTTGTGCTTCATGAACTAAATTTGCATAAGATATTCAAGTCAATCTTTGCAGCATATATAGGTGGAAGACAGGATGATGTTCAAGCCAATCTTAATGAAACCAAGAGGCTACTGGGTTTCTTTTTTCAAGATACATTCCATAGCCATTTCCCTTCCATCTTGCAGTCGCCTGTTGTCTTCTGCTCCGCCATCGACATGGCGAATCAAGCTGAATCCTCCGATGCTAAGGGTGCCAAGAGGGATTTTAGTACCGCGATTCTGGAGCGTAAGAAAGCCGCGAACCGGCTTGTTGTTGATGAGGCCACCAATGATGACAACTCGGTGGTTGCGCTTCACCCTGACACTATGGAGAAGCTTCAACTCTTCCGTGGCGACACGATCTTGATTAAGGGGAAGAAAAGGAAGGATACAATCTGCATTGCTCTTGCCGATGACACGTGTGATGAGCCAAAAATAAGAATGAACAAGGTTGTGCGAAGCAACCTTCGTGTCAGGCTTGGAGATGTTGTTTCTGTGCATCAATGTGCTGATGTTAAATATGGAAAGCGGGTACACATTCTTCCAGTCGACGACACTATTGAAGGTGTCACCGGGAATCTTTTTGATGCATACTTGAAACATTATGATGATATCATTTCTGGCAATGTGCTGGTTGCTCAGACATTTTTGTTGACTTTGTGA

Coding sequence (CDS)

ATGCCCTTCAGCATTGCTTCTGTTGTCTTTTTCAACAATTTAGACACTTGTACTGCCACTTCTCTTGATGCCAGAATATGCTTTGTTGTGCTTCATGAACTAAATTTGCATAAGATATTCAAGTCAATCTTTGCAGCATATATAGGTGGAAGACAGGATGATGTTCAAGCCAATCTTAATGAAACCAAGAGGCTACTGGGTTTCTTTTTTCAAGATACATTCCATAGCCATTTCCCTTCCATCTTGCAGTCGCCTGTTGTCTTCTGCTCCGCCATCGACATGGCGAATCAAGCTGAATCCTCCGATGCTAAGGGTGCCAAGAGGGATTTTAGTACCGCGATTCTGGAGCGTAAGAAAGCCGCGAACCGGCTTGTTGTTGATGAGGCCACCAATGATGACAACTCGGTGGTTGCGCTTCACCCTGACACTATGGAGAAGCTTCAACTCTTCCGTGGCGACACGATCTTGATTAAGGGGAAGAAAAGGAAGGATACAATCTGCATTGCTCTTGCCGATGACACGTGTGATGAGCCAAAAATAAGAATGAACAAGGTTGTGCGAAGCAACCTTCGTGTCAGGCTTGGAGATGTTGTTTCTGTGCATCAATGTGCTGATGTTAAATATGGAAAGCGGGTACACATTCTTCCAGTCGACGACACTATTGAAGGTGTCACCGGGAATCTTTTTGATGCATACTTGAAACATTATGATGATATCATTTCTGGCAATGTGCTGGTTGCTCAGACATTTTTGTTGACTTTGTGA

Protein sequence

MPFSIASVVFFNNLDTCTATSLDARICFVVLHELNLHKIFKSIFAAYIGGRQDDVQANLNETKRLLGFFFQDTFHSHFPSILQSPVVFCSAIDMANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKHYDDIISGNVLVAQTFLLTL
Homology
[Close]
BLAST of Csor.00g144040 vs. ExPASy Swiss-Prot
Match: Q9SCN8 (Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CDC48D PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.5e-69
Identity = 128/143 (89.51%), Postives = 138/143 (96.50%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           MANQAESSD+KG K+DFSTAILE+KKAANRLVVDEA NDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDT+CIALAD+TCDEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 237
           ILP+DDTIEGV+GN+FDAYLK Y
Sbjct: 121 ILPLDDTIEGVSGNIFDAYLKPY 143

[Close]
BLAST of Csor.00g144040 vs. ExPASy Swiss-Prot
Match: Q96372 (Cell division cycle protein 48 homolog OS=Capsicum annuum OX=4072 GN=CAFP PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.1e-67
Identity = 127/143 (88.81%), Postives = 136/143 (95.10%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M +QAESSD+K AK+DFSTAILERKKAANRLVVDEA NDDNSVVALHP TMEKLQLFRGD
Sbjct: 1   MTDQAESSDSKNAKKDFSTAILERKKAANRLVVDEAVNDDNSVVALHPATMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDT+ IALAD+TCDEPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 237
           ILP+DDTIEG+TG+LFDA+LK Y
Sbjct: 121 ILPIDDTIEGLTGDLFDAFLKPY 143

[Close]
BLAST of Csor.00g144040 vs. ExPASy Swiss-Prot
Match: Q9LZF6 (Cell division control protein 48 homolog E OS=Arabidopsis thaliana OX=3702 GN=CDC48E PE=2 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 7.6e-66
Identity = 124/143 (86.71%), Postives = 135/143 (94.41%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M+N+ ESSD+K  K+DFSTAILERKK+ NRLVVDEA NDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 237
           ILPVDDT+EGVTGNLFDAYLK Y
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLKPY 142

[Close]
BLAST of Csor.00g144040 vs. ExPASy Swiss-Prot
Match: P54774 (Cell division cycle protein 48 homolog OS=Glycine max OX=3847 GN=CDC48 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 7.6e-66
Identity = 123/143 (86.01%), Postives = 131/143 (91.61%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M+ Q ESSD K  K+DFSTAILERKK+ NRLVVDEA NDDNSVV +HP TMEKLQLFRGD
Sbjct: 1   MSQQGESSDPKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDTICIALAD+ C+EPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 237
           ILP+DDTIEGVTGNLFDA+LK Y
Sbjct: 121 ILPIDDTIEGVTGNLFDAFLKPY 143

[Close]
BLAST of Csor.00g144040 vs. ExPASy Swiss-Prot
Match: P54609 (Cell division control protein 48 homolog A OS=Arabidopsis thaliana OX=3702 GN=CDC48A PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.2e-65
Identity = 124/143 (86.71%), Postives = 135/143 (94.41%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M+  AESSD+K +K+DFSTAILERKK+ NRLVVDEA NDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 237
           ILPVDDT+EGVTGNLFDAYLK Y
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLKPY 142

[Close]
BLAST of Csor.00g144040 vs. NCBI nr
Match: KAG6604405.1 (Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 506 bits (1302), Expect = 1.38e-180
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 

Query: 1   MPFSIASVVFFNNLDTCTATSLDARICFVVLHELNLHKIFKSIFAAYIGGRQDDVQANLN 60
           MPFSIASVVFFNNLDTCTATSLDARICFVVLHELNLHKIFKSIFAAYIGGRQDDVQANLN
Sbjct: 1   MPFSIASVVFFNNLDTCTATSLDARICFVVLHELNLHKIFKSIFAAYIGGRQDDVQANLN 60

Query: 61  ETKRLLGFFFQDTFHSHFPSILQSPVVFCSAIDMANQAESSDAKGAKRDFSTAILERKKA 120
           ETKRLLGFFFQDTFHSHFPSILQSPVVFCSAIDMANQAESSDAKGAKRDFSTAILERKKA
Sbjct: 61  ETKRLLGFFFQDTFHSHFPSILQSPVVFCSAIDMANQAESSDAKGAKRDFSTAILERKKA 120

Query: 121 ANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKI 180
           ANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKI
Sbjct: 121 ANRLVVDEATNDDNSVVALHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKI 180

Query: 181 RMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKHYDDII 240
           RMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKHYDDII
Sbjct: 181 RMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKHYDDII 240

Query: 241 SGNVLVAQTFLLTL 254
           SGNVLVAQTFLLTL
Sbjct: 241 SGNVLVAQTFLLTL 254

[Close]
BLAST of Csor.00g144040 vs. NCBI nr
Match: KAG7027251.1 (Cell division cycle protein 48-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298 bits (762), Expect = 2.05e-91
Identity = 150/170 (88.24%), Postives = 156/170 (91.76%), Query Frame = 0 

Query: 73  TFHSHFPS------ILQSPVVFCSAIDMANQAESSDAKGAKRDFSTAILERKKAANRLVV 132
           TF+ HF S        Q P+VFC AIDMANQAESSD+KG+KRDFSTAILERKKAANRL+V
Sbjct: 26  TFYRHFSSDFVVSATTQPPLVFCLAIDMANQAESSDSKGSKRDFSTAILERKKAANRLIV 85

Query: 133 DEATNDDNSVVALHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKIRMNKVV 192
           DEA NDDNSVVALHPDTMEKLQLFRGDTILIKGKKR+DTICIALADDTCDEPKIRMNKVV
Sbjct: 86  DEAVNDDNSVVALHPDTMEKLQLFRGDTILIKGKKRRDTICIALADDTCDEPKIRMNKVV 145

Query: 193 RSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKHY 236
           RSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLK Y
Sbjct: 146 RSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPY 195

[Close]
BLAST of Csor.00g144040 vs. NCBI nr
Match: KAG6595230.1 (Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276 bits (706), Expect = 3.10e-91
Identity = 136/141 (96.45%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           MANQAESSD+KG+KRDFSTAILERKKAANRL+VDEA NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKR+DTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLK 234
           ILPVDDTIEGVTGNLFDAYLK
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLK 141

[Close]
BLAST of Csor.00g144040 vs. NCBI nr
Match: XP_023539536.1 (cell division control protein 48 homolog D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277 bits (708), Expect = 1.46e-90
Identity = 138/143 (96.50%), Postives = 139/143 (97.20%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           MANQAESSD+KG KRDFSTAILERKKA NRLVVDEA NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 236
           ILPVDDTIEGVTGNLFDAYLK Y
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKPY 143

[Close]
BLAST of Csor.00g144040 vs. NCBI nr
Match: KAG6596480.1 (Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275 bits (703), Expect = 1.59e-90
Identity = 137/141 (97.16%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           MANQAESSD+KG KRDFSTAILERKKA NRLVVDEA NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLK 234
           ILPVDDTIEGVTGNLFDAYLK
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLK 141

[Close]
BLAST of Csor.00g144040 vs. ExPASy TrEMBL
Match: A0A2P5CH24 (AAA ATPase, CDC48 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153160 PE=4 SV=1)

HSP 1 Score: 276 bits (706), Expect = 1.82e-89
Identity = 136/143 (95.10%), Postives = 140/143 (97.90%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M+NQAESSD+KG KRDFSTAILERKKAANRLVVDEA NDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MSNQAESSDSKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 236
           ILP+DDTIEGVTGNLFDAYLK Y
Sbjct: 121 ILPIDDTIEGVTGNLFDAYLKPY 143

[Close]
BLAST of Csor.00g144040 vs. ExPASy TrEMBL
Match: A0A067E2N8 (CDC48_N domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0036232mg PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 2.06e-89
Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M+NQAESSDAKG KRDFSTAILERKKA NRLVVDEA NDDNSVV LHPDTMEKLQ FRGD
Sbjct: 1   MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDT+CIALADDTC+EPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLK 234
           ILPVDDTIEGVTGNLFDAYLK
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLK 141

[Close]
BLAST of Csor.00g144040 vs. ExPASy TrEMBL
Match: A0A2R6R7W6 (Cell division control protein 48 D like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc08477 PE=4 SV=1)

HSP 1 Score: 273 bits (697), Expect = 3.36e-88
Identity = 134/143 (93.71%), Postives = 139/143 (97.20%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M+NQAESSD+KG KRDFSTAILERKK+ NRLVVDEA NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MSNQAESSDSKGTKRDFSTAILERKKSPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 236
           ILP+DD+IEGVTGNLFDAYLK Y
Sbjct: 121 ILPIDDSIEGVTGNLFDAYLKPY 143

[Close]
BLAST of Csor.00g144040 vs. ExPASy TrEMBL
Match: A0A2P5FV89 (AAA ATPase, CDC48 family OS=Trema orientale OX=63057 GN=TorRG33x02_024880 PE=3 SV=1)

HSP 1 Score: 276 bits (706), Expect = 1.28e-87
Identity = 136/143 (95.10%), Postives = 140/143 (97.90%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M+NQAESSD+KG KRDFSTAILERKKAANRLVVDEA NDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MSNQAESSDSKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 236
           ILP+DDTIEGVTGNLFDAYLK Y
Sbjct: 121 ILPIDDTIEGVTGNLFDAYLKPY 143

[Close]
BLAST of Csor.00g144040 vs. ExPASy TrEMBL
Match: A0A072TJQ8 (Cell division control-like protein OS=Medicago truncatula OX=3880 GN=MTR_0041s0130 PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 2.17e-87
Identity = 133/144 (92.36%), Postives = 138/144 (95.83%), Query Frame = 0 

Query: 94  MANQAESSDAKGA-KRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRG 153
           MANQ ESSDAKG  KRDFSTAILERKKA NRLVVDEA NDDNSVVALHP+TMEKLQLFRG
Sbjct: 1   MANQPESSDAKGTTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG 60

Query: 154 DTILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 213
           DTILIKGKKRKDTICIALAD+TC+EPKIRMNKVVR+NLRVRLGDVVSVHQCADVKYGKRV
Sbjct: 61  DTILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV 120

Query: 214 HILPVDDTIEGVTGNLFDAYLKHY 236
           HILPVDDTIEGVTGNLFDAYLK +
Sbjct: 121 HILPVDDTIEGVTGNLFDAYLKRW 144

[Close]
BLAST of Csor.00g144040 vs. TAIR 10
Match: AT3G53230.1 (ATPase, AAA-type, CDC48 protein )

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-70
Identity = 128/143 (89.51%), Postives = 138/143 (96.50%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           MANQAESSD+KG K+DFSTAILE+KKAANRLVVDEA NDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDT+CIALAD+TCDEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 237
           ILP+DDTIEGV+GN+FDAYLK Y
Sbjct: 121 ILPLDDTIEGVSGNIFDAYLKPY 143

[Close]
BLAST of Csor.00g144040 vs. TAIR 10
Match: AT5G03340.1 (ATPase, AAA-type, CDC48 protein )

HSP 1 Score: 251.9 bits (642), Expect = 5.4e-67
Identity = 124/143 (86.71%), Postives = 135/143 (94.41%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M+N+ ESSD+K  K+DFSTAILERKK+ NRLVVDEA NDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 237
           ILPVDDT+EGVTGNLFDAYLK Y
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLKPY 142

[Close]
BLAST of Csor.00g144040 vs. TAIR 10
Match: AT3G09840.1 (cell division cycle 48 )

HSP 1 Score: 250.4 bits (638), Expect = 1.6e-66
Identity = 124/143 (86.71%), Postives = 135/143 (94.41%), Query Frame = 0 

Query: 94  MANQAESSDAKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD 153
           M+  AESSD+K +K+DFSTAILERKK+ NRLVVDEA NDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 60

Query: 154 TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 213
           TILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 214 ILPVDDTIEGVTGNLFDAYLKHY 237
           ILPVDDT+EGVTGNLFDAYLK Y
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLKPY 142

The following BLAST results are available for this feature:
BLAST of Csor.00g144040 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SCN81.5e-6989.51Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CD... [more]
Q963723.1e-6788.81Cell division cycle protein 48 homolog OS=Capsicum annuum OX=4072 GN=CAFP PE=2 S... [more]
Q9LZF67.6e-6686.71Cell division control protein 48 homolog E OS=Arabidopsis thaliana OX=3702 GN=CD... [more]
P547747.6e-6686.01Cell division cycle protein 48 homolog OS=Glycine max OX=3847 GN=CDC48 PE=2 SV=1[more]
P546092.2e-6586.71Cell division control protein 48 homolog A OS=Arabidopsis thaliana OX=3702 GN=CD... [more]
BLAST of Csor.00g144040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6604405.11.38e-180100.00Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. ... [more]
KAG7027251.12.05e-9188.24Cell division cycle protein 48-like protein, partial [Cucurbita argyrosperma sub... [more]
KAG6595230.13.10e-9196.45Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. ... [more]
XP_023539536.11.46e-9096.50cell division control protein 48 homolog D-like [Cucurbita pepo subsp. pepo][more]
KAG6596480.11.59e-9097.16Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. ... [more]
BLAST of Csor.00g144040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5CH241.82e-8995.10AAA ATPase, CDC48 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153160 P... [more]
A0A067E2N82.06e-8994.33CDC48_N domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN... [more]
A0A2R6R7W63.36e-8893.71Cell division control protein 48 D like OS=Actinidia chinensis var. chinensis OX... [more]
A0A2P5FV891.28e-8795.10AAA ATPase, CDC48 family OS=Trema orientale OX=63057 GN=TorRG33x02_024880 PE=3 S... [more]
A0A072TJQ82.17e-8792.36Cell division control-like protein OS=Medicago truncatula OX=3880 GN=MTR_0041s01... [more]
BLAST of Csor.00g144040 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53230.11.1e-7089.51ATPase, AAA-type, CDC48 protein [more]
AT5G03340.15.4e-6786.71ATPase, AAA-type, CDC48 protein [more]
AT3G09840.11.6e-6686.71cell division cycle 48 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003338CDC48, N-terminal subdomainSMARTSM01073CDC48_N_2coord: 123..206
e-value: 2.9E-33
score: 126.5
IPR003338CDC48, N-terminal subdomainPFAMPF02359CDC48_Ncoord: 123..204
e-value: 3.7E-24
score: 84.7
NoneNo IPR availableGENE3D2.40.40.20coord: 100..205
e-value: 1.4E-52
score: 177.5
NoneNo IPR availableGENE3D3.10.330.10coord: 206..241
e-value: 1.2E-9
score: 40.1
NoneNo IPR availablePANTHERPTHR23077:SF157SUBFAMILY NOT NAMEDcoord: 98..237
NoneNo IPR availablePANTHERPTHR23077AAA-FAMILY ATPASEcoord: 98..237
IPR009010Aspartate decarboxylase-like domain superfamilySUPERFAMILY50692ADC-likecoord: 121..203
IPR029067CDC48 domain 2-like superfamilySUPERFAMILY54585Cdc48 domain 2-likecoord: 205..236

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g144040.m01Csor.00g144040.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0097352 autophagosome maturation
biological_process GO:0051301 cell division
biological_process GO:0071712 ER-associated misfolded protein catabolic process
biological_process GO:0051228 mitotic spindle disassembly
biological_process GO:0030970 retrograde protein transport, ER to cytosol
biological_process GO:0030433 ubiquitin-dependent ERAD pathway
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0031593 polyubiquitin modification-dependent protein binding