Csor.00g143520 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g143520
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr03: 8925820 .. 8928474 (-)
RNA-Seq ExpressionCsor.00g143520
SyntenyCsor.00g143520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCAAATCCCATTCTCGGCGAGGATTTTCCAAGCTACGGACCGGAAAAGATACCCTTCTTCTTCAAAGCGTCGAGGATGTGCGTCCGGGGAGCGCATACCTTTGTTCGTCTGTGGCTGATGAACGACGGTGATTACTTATTACTCCGATGATCTTTTTCATTTTCTTGCAATAATCTTTGATTTCATTTCAATCCCTAAGCTATATCGGAAATATTTCGTCTCGGTATCTGCTTTATTCTATTCTCTCTTATCGGCCTAATCTTGAGATCATTGACCTTGTTTGGCCTGTTTGGTTGCTGAGAAATCGTCGGAAACGATGGAAAGAAATCCGTTCTTGAAAACCCTAATGCTTCTGATTCGTAATCCGATGTGACGGTTTAGATTTTCAGGACTTTCTGAGTTTTTCCGAATAGATAGATAGGTTTCCGCATAGATGCATAATTTTTTATTCTCTCAACTTTGCTCTTCCTTTCATTACTTTGCTTCCCTTAACTCGAAGGAGCTTAAAAAGAAATTATAGTTTCAAGTATGAACAAAAACTACAATTGCATTGCTTGCTTTATGAATTGTTTTCTTTTCCTGATACGATAAAAAATGATAAAGATCGGATGAAAGAGTGTAAGAAGTTATTAGTCTTTAACTCTGTCCACTCATTTTTCGCTTCCATTTTGTCCTCCTGGAGATGCAATATCATAGTGTAATTTTTGTTAGATGCTCGAACTCTTTGATAGATATTATATATCGTGTACATCATGCATGTTTGATCTGTTGTACATTTTCATTTACTAGAGGAGTATCCAAAAGGAGATCCCTTAATAAAATTCTATTATAGCCTCTCGAGCAACCTCCTTTAACCGAGGCTTGACTTCTTTTCTGGAGTCCTCGCCATTTGTTTTATACTTGAGTCACTTTGACTACATCTTCAAGACTCACTCAGAACTTCTTTATTCGACATTTGAGGATTCTATTGACATAGACTAAGTGAAGGGCATGACTCTGATACCATGTTAGGGATCACGACTCTCCATAATGATATGATATTGTCTACATTGAGCATAATCTCTCGTGGCTTTGCTTTAGGCTTCCCCAAAAGGCTTCATACCAATGGAGATGTATTCTTTATTTATAAACTCAATATCATTTCCTAAATTAGTCAATGTAGAACACCTTCCCAACCCTCTTCAACTATATAAGTTGAAACTGCGCATTTCAGCATTTGGAGGTTTCCTCTGCGAGAAGTATACGACATAAGATGATCCCAAAAATTTTACCATTGCAAACACATTTGAGTACCAGATGTACTTTGACAACATCTGGCATGGGAGCGAGGTGGGGAAAGCCATTGATGAAGCAAGATTGGGAAAGAAATTACTGAAACCGTTGTTGAATTTTCCTACCCTGTCCTTTGAAATGAAATCAAACCCATAAACCATTCAAATTACTCCATCTGGGAACTAAGCGGCAGCTGAGAAAGCCTGATGGCTTTTAAAAGATGATCGACACCTGTTTTTGTTATAACTTTGGCTTTGGACTGTTGTAGCTTTTTGGTGGATCGCATCCCTTCTGAAATTACAAAAATTGTTGGGTTGATCATCCATTCTCATCATTACAACATTTGACTCTTCACATGTTGATAATATAGCTACTTGCATTGGGAAGGAAGGACTCTATGATATGATACTTAGTTTTGAAGACATTTCAAATATCTATAAAATTTTTAAATTTATCTAATTTTTGTAAACAGTACTTAATTAATTATAATCCACCTTCATTAAAAATGTATTTATTTAACCATATACATATAATTCATTTTTATGATCTTTTTGTTTCTTAATAAAAAAATTTAACCTCAATGTACCATTCACTACAAAATTAAGAGCAAAATGGATATGCATTAAAAAGTTTAGGGTAAAATTATTTGGTAAAGATTTTTCCATGTAGCATAGATAAGGACTATATAGCTTAAATTTGCATGACTAAAATTTAAATTACATGTATAGTCATTGTGACTAAAATTTTTTCTTCCAATTTTAAGTTTATGGCATATAGTTTGTAATTTAGTGATTAGTAATTAGTAGAAAAAGATTAGACTGCGGTTGAGCAGAGGCAGCGGGGGTTTAGTTGAACCGAATTGCTATTGTTTGCCCTTGCTCTGCGCAAGAATCAAGATTATTACTCGTTCTGTATCTCTTCGGCGGAAAACTCTCGACCGAATTTGGATTTTGCATCGATAGCGCTCTCCAACGATTATCGGTACTACTGCGAAGCATTTTCAGGTGCCCTTAATGCATTACGCATTTTCCCTTTTCGTTATCTTCCTTTGAAGTTCTGTCTTTTCTCTGCTCTGAGTGTGTTTTCCCTTGTAGCTCGGTTTATTGGCTCTAATTTTCTTCTGCTATTGAATTCGATTGATAATGTGTAATGGGTTTCGAGTTTTCTTCTGTTCTTCAGCTGTGGGGTTGATTAGATACACTTTTGCAAGTCAGAGTTCATTTATTAGTTTCTGCGAAATCTTGATTTCTAGAATTTGTTTTTCGTTACATTTCCCTTAGGTCTCTCTGCCACTAATCTTCTGAATTTCAGACCTTTTATGTATCTGAATTTCTTTTCATTTTCAGCTGCATTGATTCAGTGTTAGATGATGGCTAG

mRNA sequence

ATGGCGCCAAATCCCATTCTCGGCGAGGATTTTCCAAGCTACGGACCGGAAAAGATACCCTTCTTCTTCAAAGCGTCGAGGATGTGCGTCCGGGGAGCGCATACCTTTGTTCGTCTGTGGCTGATGAACGACGAATCAAGATTATTACTCGTTCTGTATCTCTTCGGCGGAAAACTCTCGACCGAATTTGGATTTTGCATCGATAGCGCTCTCCAACGATTATCGGTACTACTGCGAAGCATTTTCAGCTGCATTGATTCAGTGTTAGATGATGGCTAG

Coding sequence (CDS)

ATGGCGCCAAATCCCATTCTCGGCGAGGATTTTCCAAGCTACGGACCGGAAAAGATACCCTTCTTCTTCAAAGCGTCGAGGATGTGCGTCCGGGGAGCGCATACCTTTGTTCGTCTGTGGCTGATGAACGACGAATCAAGATTATTACTCGTTCTGTATCTCTTCGGCGGAAAACTCTCGACCGAATTTGGATTTTGCATCGATAGCGCTCTCCAACGATTATCGGTACTACTGCGAAGCATTTTCAGCTGCATTGATTCAGTGTTAGATGATGGCTAG

Protein sequence

MAPNPILGEDFPSYGPEKIPFFFKASRMCVRGAHTFVRLWLMNDESRLLLVLYLFGGKLSTEFGFCIDSALQRLSVLLRSIFSCIDSVLDDG
Homology
[Close]
BLAST of Csor.00g143520 vs. NCBI nr
Match: KAG6604353.1 (hypothetical protein SDJN03_04962, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191 bits (486), Expect = 1.82e-61
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MAPNPILGEDFPSYGPEKIPFFFKASRMCVRGAHTFVRLWLMNDESRLLLVLYLFGGKLS 60
          MAPNPILGEDFPSYGPEKIPFFFKASRMCVRGAHTFVRLWLMNDESRLLLVLYLFGGKLS
Sbjct: 1  MAPNPILGEDFPSYGPEKIPFFFKASRMCVRGAHTFVRLWLMNDESRLLLVLYLFGGKLS 60

Query: 61 TEFGFCIDSALQRLSVLLRSIFSCIDSVLDDG 92
          TEFGFCIDSALQRLSVLLRSIFSCIDSVLDDG
Sbjct: 61 TEFGFCIDSALQRLSVLLRSIFSCIDSVLDDG 92

The following BLAST results are available for this feature:
BLAST of Csor.00g143520 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g143520 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6604353.11.82e-61100.00hypothetical protein SDJN03_04962, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g143520 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g143520 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g143520.m01Csor.00g143520.m01mRNA