Csor.00g140840 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGGAATCAATCTCATCTCCGCCGCCGCCGCCGCCGTCCTCCTGGTTTTAGCTTCTATCTTCAATAATAACATTCCACACACCCAAGGACTAAGGTTGCTGCCAATGGAGCAGGAGCATCCAGCCGTCCATCTCAATTCGAGGCCACAGTCATTTCACCCCTCTCCCATTGCTGCTACAGACGTGGACGTGCATGGCGGCGACTTCCGTCCCACCACACCCGGCCACAGCCCCGGCGCCGGTCACGGCCTTGCGCCGGACAGCCACGTGGATTCCAAAATCCATTAG ATGGCCGGAATCAATCTCATCTCCGCCGCCGCCGCCGCCGTCCTCCTGGTTTTAGCTTCTATCTTCAATAATAACATTCCACACACCCAAGGACTAAGGTTGCTGCCAATGGAGCAGGAGCATCCAGCCGTCCATCTCAATTCGAGGCCACAGTCATTTCACCCCTCTCCCATTGCTGCTACAGACGTGGACGTGCATGGCGGCGACTTCCGTCCCACCACACCCGGCCACAGCCCCGGCGCCGGTCACGGCCTTGCGCCGGACAGCCACGTGGATTCCAAAATCCATTAG ATGGCCGGAATCAATCTCATCTCCGCCGCCGCCGCCGCCGTCCTCCTGGTTTTAGCTTCTATCTTCAATAATAACATTCCACACACCCAAGGACTAAGGTTGCTGCCAATGGAGCAGGAGCATCCAGCCGTCCATCTCAATTCGAGGCCACAGTCATTTCACCCCTCTCCCATTGCTGCTACAGACGTGGACGTGCATGGCGGCGACTTCCGTCCCACCACACCCGGCCACAGCCCCGGCGCCGGTCACGGCCTTGCGCCGGACAGCCACGTGGATTCCAAAATCCATTAG MAGINLISAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQEHPAVHLNSRPQSFHPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH Homology
BLAST of Csor.00g140840 vs. NCBI nr
Match: KAG6608491.1 (hypothetical protein SDJN03_01833, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 191 bits (486), Expect = 2.44e-61 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Csor.00g140840 vs. NCBI nr
Match: TYK20222.1 (hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 3.78e-17 Identity = 59/110 (53.64%), Postives = 67/110 (60.91%), Query Frame = 0
BLAST of Csor.00g140840 vs. NCBI nr
Match: KAG6591363.1 (Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.9 bits (185), Expect = 2.07e-15 Identity = 52/97 (53.61%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Csor.00g140840 vs. NCBI nr
Match: KAA0064365.1 (hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 2.48e-15 Identity = 57/110 (51.82%), Postives = 66/110 (60.00%), Query Frame = 0
BLAST of Csor.00g140840 vs. NCBI nr
Match: KGN55172.1 (hypothetical protein Csa_012400 [Cucumis sativus]) HSP 1 Score: 66.6 bits (161), Expect = 1.05e-11 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of Csor.00g140840 vs. ExPASy TrEMBL
Match: A0A5D3D9H8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003590 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.83e-17 Identity = 59/110 (53.64%), Postives = 67/110 (60.91%), Query Frame = 0
BLAST of Csor.00g140840 vs. ExPASy TrEMBL
Match: A0A5A7VEP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00660 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.20e-15 Identity = 57/110 (51.82%), Postives = 66/110 (60.00%), Query Frame = 0
BLAST of Csor.00g140840 vs. ExPASy TrEMBL
Match: A0A0A0L3I5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639110 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 5.06e-12 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of Csor.00g140840 vs. ExPASy TrEMBL
Match: A0A2J6MI11 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X113501 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 6.78e-04 Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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