Csor.00g140050 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g140050
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 14085859 .. 14086604 (-)
RNA-Seq ExpressionCsor.00g140050
SyntenyCsor.00g140050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGATAAGGCTTTTATCAGTTTGGACAGGTCGGTGAGTCTCTCCAATCCAACACATCAGACATCAGACATCAGCCACTGCCTCGTTTTGTAGCTGTCCTGAGTTGAAATCGTGATTAGATTGTCCGAACCTGCAGTTTCTTTTGTATTGAATTTGTCAGATATCCTTCACTCTGACTACGCTTCTAGATTAAATTGGCTGTCAAATGTTGCTACCTCAACTCCCTCTACAAATACATCACCTAGGCTGTTCAATGGGTTAGAGGCACATTTTGAGAAGGCAAGGTCTTCTATTACAAGATATTCGCAATAGATTGCATTGAAGATTATCAACAGAGCTCACACAACTTGTCAGCAAAGGTTATGATCAATTTCTTGTAATTGTAAGTTCCATATATACACGATATTGTTAAATAATGTAAAAGTTAATGCTAGCACAGCAGAAAAGACCTCCTTTGAAGGTATCCCTTTCGACCCAAGTCAAATTGTTACACTTTCTAGATGGGTATGGAATTGGCCAAGCTGGTTACTAGGGATGGGCAGAGCAAGGAGCCCAGATTCGACTTCAGGGACCATTACCTTCATTTTGACCTGAAGCTATATCCCAAAAAGATAGCAACTTCAGTTGGTGGGGCTCCAAAGTGCAAAGATGGGAAGCATCATATGGTGAAGAAACTTGTAGGATGCCTAAAACCCACTTGGATGTCTCGGCAAGTAACCAGAATGCGTGGCTGGGTTGGGTAG

mRNA sequence

ATGATGGATAAGGCTTTTATCAGTTTGGACAGATTGTCCGAACCTGCAGTTTCTTTTGTATTGAATTTGTCAGATATCCTTCACTCTGACTACGCTTCTAGATTAAATTGGCTGTCAAATGTTGCTACCTCAACTCCCTCTACAAATACATCACCTAGGCTGTTCAATGGGTTAGAGGCACATTTTGAGAAGGCAAGGGATGGGCAGAGCAAGGAGCCCAGATTCGACTTCAGGGACCATTACCTTCATTTTGACCTGAAGCTATATCCCAAAAAGATAGCAACTTCAGTTGGTGGGGCTCCAAAGTGCAAAGATGGGAAGCATCATATGGTGAAGAAACTTGTAGGATGCCTAAAACCCACTTGGATGTCTCGGCAAGTAACCAGAATGCGTGGCTGGGTTGGGTAG

Coding sequence (CDS)

ATGATGGATAAGGCTTTTATCAGTTTGGACAGATTGTCCGAACCTGCAGTTTCTTTTGTATTGAATTTGTCAGATATCCTTCACTCTGACTACGCTTCTAGATTAAATTGGCTGTCAAATGTTGCTACCTCAACTCCCTCTACAAATACATCACCTAGGCTGTTCAATGGGTTAGAGGCACATTTTGAGAAGGCAAGGGATGGGCAGAGCAAGGAGCCCAGATTCGACTTCAGGGACCATTACCTTCATTTTGACCTGAAGCTATATCCCAAAAAGATAGCAACTTCAGTTGGTGGGGCTCCAAAGTGCAAAGATGGGAAGCATCATATGGTGAAGAAACTTGTAGGATGCCTAAAACCCACTTGGATGTCTCGGCAAGTAACCAGAATGCGTGGCTGGGTTGGGTAG

Protein sequence

MMDKAFISLDRLSEPAVSFVLNLSDILHSDYASRLNWLSNVATSTPSTNTSPRLFNGLEAHFEKARDGQSKEPRFDFRDHYLHFDLKLYPKKIATSVGGAPKCKDGKHHMVKKLVGCLKPTWMSRQVTRMRGWVG
Homology
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BLAST of Csor.00g140050 vs. NCBI nr
Match: KAG6608569.1 (hypothetical protein SDJN03_01911, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284 bits (727), Expect = 7.48e-97
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MMDKAFISLDRLSEPAVSFVLNLSDILHSDYASRLNWLSNVATSTPSTNTSPRLFNGLEA 60
           MMDKAFISLDRLSEPAVSFVLNLSDILHSDYASRLNWLSNVATSTPSTNTSPRLFNGLEA
Sbjct: 1   MMDKAFISLDRLSEPAVSFVLNLSDILHSDYASRLNWLSNVATSTPSTNTSPRLFNGLEA 60

Query: 61  HFEKARDGQSKEPRFDFRDHYLHFDLKLYPKKIATSVGGAPKCKDGKHHMVKKLVGCLKP 120
           HFEKARDGQSKEPRFDFRDHYLHFDLKLYPKKIATSVGGAPKCKDGKHHMVKKLVGCLKP
Sbjct: 61  HFEKARDGQSKEPRFDFRDHYLHFDLKLYPKKIATSVGGAPKCKDGKHHMVKKLVGCLKP 120

Query: 121 TWMSRQVTRMRGWVG 135
           TWMSRQVTRMRGWVG
Sbjct: 121 TWMSRQVTRMRGWVG 135

The following BLAST results are available for this feature:
BLAST of Csor.00g140050 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g140050 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6608569.17.48e-97100.00hypothetical protein SDJN03_01911, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g140050 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g140050 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g140050.m01Csor.00g140050.m01mRNA