Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGATCCTTATTTTCTAGATCGAACGAGCACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTACGGTGGCAGCCACGGCGGACTTTTGCAAACGCCGCCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACCACCGCCTCTTCTTACACCGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGGCGGCGGTGGTTGATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCCGCCGCCCAGTAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGACGAAGCTCAATTGTAATGCGTAG
mRNA sequence
ATGGCCGATCCTTATTTTCTAGATCGAACGAGCACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTACGGTGGCAGCCACGGCGGACTTTTGCAAACGCCGCCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACCACCGCCTCTTCTTACACCGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGGCGGCGGTGGTTGATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCCGCCGCCCAGTAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGACGAAGCTCAATTGTAATGCGTAG
Coding sequence (CDS)
ATGGCCGATCCTTATTTTCTAGATCGAACGAGCACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTACGGTGGCAGCCACGGCGGACTTTTGCAAACGCCGCCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACCACCGCCTCTTCTTACACCGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGGCGGCGGTGGTTGATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCCGCCGCCCAGTAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGACGAAGCTCAATTGTAATGCGTAG
Protein sequence
MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA
Homology
BLAST of Csor.00g139700 vs. NCBI nr
Match:
KAG6608604.1 (hypothetical protein SDJN03_01946, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037922.1 hypothetical protein SDJN02_01553, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 333 bits (854), Expect = 3.86e-115
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPF 60
MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPF
Sbjct: 1 MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPF 60
Query: 61 IQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVPSRTFS 120
IQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVPSRTFS
Sbjct: 61 IQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVPSRTFS 120
Query: 121 SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA 168
SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA
Sbjct: 121 SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA 168
BLAST of Csor.00g139700 vs. NCBI nr
Match:
KAA0063295.1 (uncharacterized protein E6C27_scaffold205G001180 [Cucumis melo var. makuwa])
HSP 1 Score: 223 bits (569), Expect = 2.36e-71
Identity = 121/173 (69.94%), Postives = 138/173 (79.77%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
MADPYFLDR+ ++G+ TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ P
Sbjct: 1 MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60
Query: 61 FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
F QQ + PPLL PPP LRPHR+L SQPRS HSLKKSKS +++KDSAAVVDRR+P
Sbjct: 61 FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSAAVVDRRIP 120
Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
SRT SS AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170
BLAST of Csor.00g139700 vs. NCBI nr
Match:
XP_008466665.1 (PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo] >TYK31480.1 uncharacterized protein E5676_scaffold455G007960 [Cucumis melo var. makuwa])
HSP 1 Score: 222 bits (565), Expect = 9.59e-71
Identity = 120/173 (69.36%), Postives = 137/173 (79.19%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
MADPYFLDR+ ++G+ TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ P
Sbjct: 1 MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60
Query: 61 FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
F QQ + PPLL PPP LRPHR+L SQPRS HSLKKSKS +++KDSA VVDRR+P
Sbjct: 61 FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSATVVDRRIP 120
Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
SRT SS AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170
BLAST of Csor.00g139700 vs. NCBI nr
Match:
KGN60046.1 (hypothetical protein Csa_001363 [Cucumis sativus])
HSP 1 Score: 220 bits (560), Expect = 5.90e-70
Identity = 122/175 (69.71%), Postives = 138/175 (78.86%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
MADPYFLDR+ ++G+ TR+SN FHL+N AAV G SHGGLLQTPPRF S PS H+HQ P
Sbjct: 1 MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60
Query: 61 FIQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRV 120
F QQ + PPLL PPP +RPHR+L SQPRS HSLKKSKS +++KDSAAVVDRR+
Sbjct: 61 FFQQNKS--PPLLPPPPTPTQSNIRPHRSLPSQPRS-HSLKKSKSTRKEKDSAAVVDRRI 120
Query: 121 PSRTFSSPAA-AKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
PSRT SS A AKRVVRVEE +KLSGC F VISPPPSSLPLPKF +RP K LNCN
Sbjct: 121 PSRTISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCN 172
BLAST of Csor.00g139700 vs. NCBI nr
Match:
XP_022139188.1 (uncharacterized protein LOC111010153 [Momordica charantia])
HSP 1 Score: 195 bits (496), Expect = 3.23e-60
Identity = 122/179 (68.16%), Postives = 134/179 (74.86%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTR---VSNE---FHLQN-AAVYGGSHGGLLQTPPRFFSVPSI- 60
MADPYFLDR +GY TR +SN ++L+N AA G +HGGLL+TPPRFFS PSI
Sbjct: 1 MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
Query: 61 HSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSL--KKSKSIKRDKDS--AA 120
H HQ PFIQ Q PPPLL PPPILRPHR+L SQP SHSL KKSKS KR + S A
Sbjct: 61 HGHQFHPFIQLQ---PPPLL-PPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKSFSPA 120
Query: 121 VVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN 167
VVDRR SRT S+ AAAKRVV+VEE D LSGCLFA +SPPPSSLPLPKFCLRP KLNCN
Sbjct: 121 VVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAKLNCN 173
BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match:
A0A5A7VBL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001180 PE=4 SV=1)
HSP 1 Score: 223 bits (569), Expect = 1.14e-71
Identity = 121/173 (69.94%), Postives = 138/173 (79.77%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
MADPYFLDR+ ++G+ TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ P
Sbjct: 1 MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60
Query: 61 FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
F QQ + PPLL PPP LRPHR+L SQPRS HSLKKSKS +++KDSAAVVDRR+P
Sbjct: 61 FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSAAVVDRRIP 120
Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
SRT SS AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170
BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match:
A0A5D3E771 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007960 PE=4 SV=1)
HSP 1 Score: 222 bits (565), Expect = 4.64e-71
Identity = 120/173 (69.36%), Postives = 137/173 (79.19%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
MADPYFLDR+ ++G+ TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ P
Sbjct: 1 MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60
Query: 61 FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
F QQ + PPLL PPP LRPHR+L SQPRS HSLKKSKS +++KDSA VVDRR+P
Sbjct: 61 FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSATVVDRRIP 120
Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
SRT SS AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170
BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match:
A0A1S3CRS4 (uncharacterized protein LOC103504021 OS=Cucumis melo OX=3656 GN=LOC103504021 PE=4 SV=1)
HSP 1 Score: 222 bits (565), Expect = 4.64e-71
Identity = 120/173 (69.36%), Postives = 137/173 (79.19%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
MADPYFLDR+ ++G+ TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ P
Sbjct: 1 MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60
Query: 61 FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
F QQ + PPLL PPP LRPHR+L SQPRS HSLKKSKS +++KDSA VVDRR+P
Sbjct: 61 FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSATVVDRRIP 120
Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
SRT SS AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170
BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match:
A0A0A0LJ69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873260 PE=4 SV=1)
HSP 1 Score: 220 bits (560), Expect = 2.86e-70
Identity = 122/175 (69.71%), Postives = 138/175 (78.86%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
MADPYFLDR+ ++G+ TR+SN FHL+N AAV G SHGGLLQTPPRF S PS H+HQ P
Sbjct: 1 MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60
Query: 61 FIQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRV 120
F QQ + PPLL PPP +RPHR+L SQPRS HSLKKSKS +++KDSAAVVDRR+
Sbjct: 61 FFQQNKS--PPLLPPPPTPTQSNIRPHRSLPSQPRS-HSLKKSKSTRKEKDSAAVVDRRI 120
Query: 121 PSRTFSSPAA-AKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
PSRT SS A AKRVVRVEE +KLSGC F VISPPPSSLPLPKF +RP K LNCN
Sbjct: 121 PSRTISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCN 172
BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match:
A0A6J1CF43 (uncharacterized protein LOC111010153 OS=Momordica charantia OX=3673 GN=LOC111010153 PE=4 SV=1)
HSP 1 Score: 195 bits (496), Expect = 1.56e-60
Identity = 122/179 (68.16%), Postives = 134/179 (74.86%), Query Frame = 0
Query: 1 MADPYFLDRTSTSGYKPTR---VSNE---FHLQN-AAVYGGSHGGLLQTPPRFFSVPSI- 60
MADPYFLDR +GY TR +SN ++L+N AA G +HGGLL+TPPRFFS PSI
Sbjct: 1 MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60
Query: 61 HSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSL--KKSKSIKRDKDS--AA 120
H HQ PFIQ Q PPPLL PPPILRPHR+L SQP SHSL KKSKS KR + S A
Sbjct: 61 HGHQFHPFIQLQ---PPPLL-PPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKSFSPA 120
Query: 121 VVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN 167
VVDRR SRT S+ AAAKRVV+VEE D LSGCLFA +SPPPSSLPLPKFCLRP KLNCN
Sbjct: 121 VVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAKLNCN 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6608604.1 | 3.86e-115 | 100.00 | hypothetical protein SDJN03_01946, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0063295.1 | 2.36e-71 | 69.94 | uncharacterized protein E6C27_scaffold205G001180 [Cucumis melo var. makuwa] | [more] |
XP_008466665.1 | 9.59e-71 | 69.36 | PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo] >TYK31480.1 uncha... | [more] |
KGN60046.1 | 5.90e-70 | 69.71 | hypothetical protein Csa_001363 [Cucumis sativus] | [more] |
XP_022139188.1 | 3.23e-60 | 68.16 | uncharacterized protein LOC111010153 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7VBL8 | 1.14e-71 | 69.94 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3E771 | 4.64e-71 | 69.36 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CRS4 | 4.64e-71 | 69.36 | uncharacterized protein LOC103504021 OS=Cucumis melo OX=3656 GN=LOC103504021 PE=... | [more] |
A0A0A0LJ69 | 2.86e-70 | 69.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873260 PE=4 SV=1 | [more] |
A0A6J1CF43 | 1.56e-60 | 68.16 | uncharacterized protein LOC111010153 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
Match Name | E-value | Identity | Description | |