Csor.00g139700 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g139700
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 14236863 .. 14237369 (+)
RNA-Seq ExpressionCsor.00g139700
SyntenyCsor.00g139700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGATCCTTATTTTCTAGATCGAACGAGCACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTACGGTGGCAGCCACGGCGGACTTTTGCAAACGCCGCCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACCACCGCCTCTTCTTACACCGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGGCGGCGGTGGTTGATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCCGCCGCCCAGTAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGACGAAGCTCAATTGTAATGCGTAG

mRNA sequence

ATGGCCGATCCTTATTTTCTAGATCGAACGAGCACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTACGGTGGCAGCCACGGCGGACTTTTGCAAACGCCGCCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACCACCGCCTCTTCTTACACCGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGGCGGCGGTGGTTGATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCCGCCGCCCAGTAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGACGAAGCTCAATTGTAATGCGTAG

Coding sequence (CDS)

ATGGCCGATCCTTATTTTCTAGATCGAACGAGCACTTCCGGCTATAAGCCAACCAGAGTTTCAAACGAGTTTCACCTTCAAAATGCCGCCGTCTACGGTGGCAGCCACGGCGGACTTTTGCAAACGCCGCCACGATTCTTCTCAGTTCCATCAATCCACAGCCACCAGCTTCTCCCCTTCATCCAACAACAACAACAACAACCACCGCCTCTTCTTACACCGCCGCCGATTCTACGGCCCCACCGCACTCTTTCTTCTCAACCCCGGTCATCCCACTCTCTTAAGAAATCCAAATCAATCAAAAGAGACAAAGACTCGGCGGCGGTGGTTGATCGGCGGGTTCCTTCCAGAACCTTCTCCTCGCCGGCGGCGGCAAAGAGGGTGGTTAGAGTTGAGGAGTTTGACAAATTGTCGGGGTGTTTGTTTGCGGTTATTTCTCCGCCGCCCAGTAGCTTGCCGTTGCCCAAATTTTGTCTGAGGCCGACGAAGCTCAATTGTAATGCGTAG

Protein sequence

MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA
Homology
BLAST of Csor.00g139700 vs. NCBI nr
Match: KAG6608604.1 (hypothetical protein SDJN03_01946, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037922.1 hypothetical protein SDJN02_01553, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (854), Expect = 3.86e-115
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPF 60
           MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPF
Sbjct: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQNAAVYGGSHGGLLQTPPRFFSVPSIHSHQLLPF 60

Query: 61  IQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVPSRTFS 120
           IQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVPSRTFS
Sbjct: 61  IQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVPSRTFS 120

Query: 121 SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA 168
           SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA
Sbjct: 121 SPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCNA 168

BLAST of Csor.00g139700 vs. NCBI nr
Match: KAA0063295.1 (uncharacterized protein E6C27_scaffold205G001180 [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (569), Expect = 2.36e-71
Identity = 121/173 (69.94%), Postives = 138/173 (79.77%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
           F QQ +   PPLL PPP     LRPHR+L SQPRS HSLKKSKS +++KDSAAVVDRR+P
Sbjct: 61  FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSAAVVDRRIP 120

Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
           SRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170

BLAST of Csor.00g139700 vs. NCBI nr
Match: XP_008466665.1 (PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo] >TYK31480.1 uncharacterized protein E5676_scaffold455G007960 [Cucumis melo var. makuwa])

HSP 1 Score: 222 bits (565), Expect = 9.59e-71
Identity = 120/173 (69.36%), Postives = 137/173 (79.19%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
           F QQ +   PPLL PPP     LRPHR+L SQPRS HSLKKSKS +++KDSA VVDRR+P
Sbjct: 61  FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSATVVDRRIP 120

Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
           SRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170

BLAST of Csor.00g139700 vs. NCBI nr
Match: KGN60046.1 (hypothetical protein Csa_001363 [Cucumis sativus])

HSP 1 Score: 220 bits (560), Expect = 5.90e-70
Identity = 122/175 (69.71%), Postives = 138/175 (78.86%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFLDR+ ++G+  TR+SN FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRV 120
           F QQ +   PPLL PPP      +RPHR+L SQPRS HSLKKSKS +++KDSAAVVDRR+
Sbjct: 61  FFQQNKS--PPLLPPPPTPTQSNIRPHRSLPSQPRS-HSLKKSKSTRKEKDSAAVVDRRI 120

Query: 121 PSRTFSSPAA-AKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
           PSRT SS  A AKRVVRVEE +KLSGC F VISPPPSSLPLPKF +RP K LNCN
Sbjct: 121 PSRTISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCN 172

BLAST of Csor.00g139700 vs. NCBI nr
Match: XP_022139188.1 (uncharacterized protein LOC111010153 [Momordica charantia])

HSP 1 Score: 195 bits (496), Expect = 3.23e-60
Identity = 122/179 (68.16%), Postives = 134/179 (74.86%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTR---VSNE---FHLQN-AAVYGGSHGGLLQTPPRFFSVPSI- 60
           MADPYFLDR   +GY  TR   +SN    ++L+N AA  G +HGGLL+TPPRFFS PSI 
Sbjct: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60

Query: 61  HSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSL--KKSKSIKRDKDS--AA 120
           H HQ  PFIQ Q   PPPLL PPPILRPHR+L SQP  SHSL  KKSKS KR + S   A
Sbjct: 61  HGHQFHPFIQLQ---PPPLL-PPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKSFSPA 120

Query: 121 VVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN 167
           VVDRR  SRT S+ AAAKRVV+VEE D LSGCLFA +SPPPSSLPLPKFCLRP KLNCN
Sbjct: 121 VVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAKLNCN 173

BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match: A0A5A7VBL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001180 PE=4 SV=1)

HSP 1 Score: 223 bits (569), Expect = 1.14e-71
Identity = 121/173 (69.94%), Postives = 138/173 (79.77%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
           F QQ +   PPLL PPP     LRPHR+L SQPRS HSLKKSKS +++KDSAAVVDRR+P
Sbjct: 61  FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSAAVVDRRIP 120

Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
           SRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170

BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match: A0A5D3E771 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007960 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 4.64e-71
Identity = 120/173 (69.36%), Postives = 137/173 (79.19%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
           F QQ +   PPLL PPP     LRPHR+L SQPRS HSLKKSKS +++KDSA VVDRR+P
Sbjct: 61  FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSATVVDRRIP 120

Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
           SRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170

BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match: A0A1S3CRS4 (uncharacterized protein LOC103504021 OS=Cucumis melo OX=3656 GN=LOC103504021 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 4.64e-71
Identity = 120/173 (69.36%), Postives = 137/173 (79.19%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFLDR+ ++G+  TR++N FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRITNNFHLENLAAVSGYSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQPPPLLTPPPI----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRVP 120
           F QQ +   PPLL PPP     LRPHR+L SQPRS HSLKKSKS +++KDSA VVDRR+P
Sbjct: 61  FFQQNKS--PPLLPPPPTTPSNLRPHRSLHSQPRS-HSLKKSKSTRKEKDSATVVDRRIP 120

Query: 121 SRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
           SRT SS  AAKRVVRVEE +KLSGC FA+ISPPPSSLPLPKF +RP K L CN
Sbjct: 121 SRTISSAGAAKRVVRVEELEKLSGCFFAIISPPPSSLPLPKFSMRPAKALKCN 170

BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match: A0A0A0LJ69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873260 PE=4 SV=1)

HSP 1 Score: 220 bits (560), Expect = 2.86e-70
Identity = 122/175 (69.71%), Postives = 138/175 (78.86%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTRVSNEFHLQN-AAVYGGSHGGLLQTPPRFFSVPSIHSHQLLP 60
           MADPYFLDR+ ++G+  TR+SN FHL+N AAV G SHGGLLQTPPRF S PS H+HQ  P
Sbjct: 1   MADPYFLDRSPSTGHNLTRISNHFHLENLAAVSGFSHGGLLQTPPRFLSAPSFHTHQSYP 60

Query: 61  FIQQQQQQPPPLLTPPPI-----LRPHRTLSSQPRSSHSLKKSKSIKRDKDSAAVVDRRV 120
           F QQ +   PPLL PPP      +RPHR+L SQPRS HSLKKSKS +++KDSAAVVDRR+
Sbjct: 61  FFQQNKS--PPLLPPPPTPTQSNIRPHRSLPSQPRS-HSLKKSKSTRKEKDSAAVVDRRI 120

Query: 121 PSRTFSSPAA-AKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTK-LNCN 167
           PSRT SS  A AKRVVRVEE +KLSGC F VISPPPSSLPLPKF +RP K LNCN
Sbjct: 121 PSRTISSAGAGAKRVVRVEELEKLSGCFFTVISPPPSSLPLPKFSMRPAKALNCN 172

BLAST of Csor.00g139700 vs. ExPASy TrEMBL
Match: A0A6J1CF43 (uncharacterized protein LOC111010153 OS=Momordica charantia OX=3673 GN=LOC111010153 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 1.56e-60
Identity = 122/179 (68.16%), Postives = 134/179 (74.86%), Query Frame = 0

Query: 1   MADPYFLDRTSTSGYKPTR---VSNE---FHLQN-AAVYGGSHGGLLQTPPRFFSVPSI- 60
           MADPYFLDR   +GY  TR   +SN    ++L+N AA  G +HGGLL+TPPRFFS PSI 
Sbjct: 1   MADPYFLDRPPPAGYNQTRSLPISNNNYNYNLENIAAAAGNNHGGLLRTPPRFFSAPSII 60

Query: 61  HSHQLLPFIQQQQQQPPPLLTPPPILRPHRTLSSQPRSSHSL--KKSKSIKRDKDS--AA 120
           H HQ  PFIQ Q   PPPLL PPPILRPHR+L SQP  SHSL  KKSKS KR + S   A
Sbjct: 61  HGHQFHPFIQLQ---PPPLL-PPPILRPHRSLPSQPARSHSLNPKKSKSAKRSEKSFSPA 120

Query: 121 VVDRRVPSRTFSSPAAAKRVVRVEEFDKLSGCLFAVISPPPSSLPLPKFCLRPTKLNCN 167
           VVDRR  SRT S+ AAAKRVV+VEE D LSGCLFA +SPPPSSLPLPKFCLRP KLNCN
Sbjct: 121 VVDRRAASRTSSTAAAAKRVVKVEELD-LSGCLFA-LSPPPSSLPLPKFCLRPAKLNCN 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6608604.13.86e-115100.00hypothetical protein SDJN03_01946, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0063295.12.36e-7169.94uncharacterized protein E6C27_scaffold205G001180 [Cucumis melo var. makuwa][more]
XP_008466665.19.59e-7169.36PREDICTED: uncharacterized protein LOC103504021 [Cucumis melo] >TYK31480.1 uncha... [more]
KGN60046.15.90e-7069.71hypothetical protein Csa_001363 [Cucumis sativus][more]
XP_022139188.13.23e-6068.16uncharacterized protein LOC111010153 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A5A7VBL81.14e-7169.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3E7714.64e-7169.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CRS44.64e-7169.36uncharacterized protein LOC103504021 OS=Cucumis melo OX=3656 GN=LOC103504021 PE=... [more]
A0A0A0LJ692.86e-7069.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873260 PE=4 SV=1[more]
A0A6J1CF431.56e-6068.16uncharacterized protein LOC111010153 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g139700.m01Csor.00g139700.m01mRNA