Csor.00g139390 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g139390
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 14405581 .. 14407406 (+)
RNA-Seq ExpressionCsor.00g139390
SyntenyCsor.00g139390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACATGATTGGAGAGCCTGTCTGGTTCGGCTCAAGCATTCATTGTTCGGCTGTCTGGGACCAGGTTTACATGGGAGGCCCAATATATTTCAGCCCAATTAACTGAAAAATAAAGCCTCTGAAGTCAAGGCCCAATAAAAGCCCATCACAAGAAACTCTTATTCTGCCCAACTGCAACTACCTACCTACCTGACATTATTCGCCGGCGAGTTTCGTTTAGAGAGATAAAACCGCGCTGCCATCGAGTTGCAGAGAGCCCGCCACGCGGTGTTTTGACCTAATAACTTCATCAAAATTGACAGATCCGCCGTTGCTCCAACAAGAAACTTTTTTGTAAGTGATCTTTAGCTTTCCGACTCTCTCAACTTTTGAGATATTGATACATTTTTGTTTTTTAATCTTGAAACCATTACAGATCTATCATACGCGGGCAGATCTAATCGGATCCGGAATACGAAAATCGTCAGCAGCGAAATATCCAGGGAGGTTGGATTTATTGAAGGTTGTGTTGAACTATAACCGTCTGGGTAATTGCAGTGTAAGCGTTTTCTCCAACCTTCTTTTATTCTTTACTTTGGAAATCGTGATTATTTGAGATTCACCGAATTCCTTAAGGTTCACATCTGCATCTGCTTTTTTCTTTTGGTTATTGATTTGCAATTTTTGTGTAACATCTTCATGTCTTTATGCAATCTTTTCTTTCGATTCTAATAGTGGTGGGAAATTTAGACAGGGCTATAGTTAGTCTAGGAAATTTAGTATGAACAATTACAAATGGGCACTTCCCTGTTGAGCAACAAACTCAGCTTGGGGCAGTGTTATGTCCCATTGTTATGATTTTTGGCTGCTGAAGCACCTTATAAAATGCCCAAAGTTCTATTGATCATCTTCATTCTGTGGATGAATATGGTATTAAACGTTTTCACAATGTTTGTAAACAATTACAAATTTTTGACATCACTGTCTGAAACAACTGTTTTCGGGATTACCATGGGGTTTTACCACCTCCTAAAACAAATTTGCAATATAAACAGCATCCCCATTTTTGTTTACATGGGATAAAGTGAGATATTTTACTAAAGTAGTCAACAAAAATAGGATTAAATCCTGAGACGTAGGAAATCCTAAGATCTAATTTATGGGTAAATCTTCCCAAATATTTTAAGGAGTAGGTAAAGGAATGTACAAACCTGTGCCCTGTGCCTTGTGATTTCCTTTTGCGGTTGGGCAAATGTAACAACGAGATTTGAGACATTTGTTTTCAGTTGTGTCCAACAAAACCAGCTGGAAATTAACTCGCGCTGAAATTATCAGTTGGACCCCGGCATGCATATCCTTCATATGTAATTTCCTGAGAGAATGTGCGGTATCCTTCATAAGTAATTTCCCAAGCTCCCCAATCCTATATGGTTTCCACAATTTTCCGGAATAATTTTCTAATCGGGGTCATCATAATATAATTCTTTTATGCAATATAAACGGATTTTCTATGTACGGCATCAGCGTTATTAGTTTCTCTCGATCAATGTTAAATTAGAAAACAATATTTTGCAAAAATTTAATTCAACGGGCATGCATTCTACTAGTGCATGTCTAGATTTTCTTAACAAATAGTGTTTTGTTTTCTCGTTGATCTTGATTGGGTCTAGATTTTGTCTAAAATTTATTCTTTCTAAGAACATTTTCTTTTGTAGTTGTTAATTGAATACCGCTGTTTCAAGGTCGTCATCAGGTGGATTTGTGTCATCACCAGTGTGGATCATCTTCATCCCGTTCATCAAGAGACCAAATTGAATGCTTGGATCCCAAACTCTTGTTGCTAG

mRNA sequence

ATGGCACATGATTGGAGAGCCTGTCTGGTTCGGCTCAAGCATTCATTATCCGCCGTTGCTCCAACAAGAAACTTTTTTATCTATCATACGCGGGCAGATCTAATCGGATCCGGAATACGAAAATCGTCAGCAGCGAAATATCCAGGGAGGTTGGATTTATTGAAGGTTGTGTTGAACTATAACCGTCTGGGTAATTGCAGTGTCGTCATCAGGTGGATTTGTGTCATCACCAGTGTGGATCATCTTCATCCCGTTCATCAAGAGACCAAATTGAATGCTTGGATCCCAAACTCTTGTTGCTAG

Coding sequence (CDS)

ATGGCACATGATTGGAGAGCCTGTCTGGTTCGGCTCAAGCATTCATTATCCGCCGTTGCTCCAACAAGAAACTTTTTTATCTATCATACGCGGGCAGATCTAATCGGATCCGGAATACGAAAATCGTCAGCAGCGAAATATCCAGGGAGGTTGGATTTATTGAAGGTTGTGTTGAACTATAACCGTCTGGGTAATTGCAGTGTCGTCATCAGGTGGATTTGTGTCATCACCAGTGTGGATCATCTTCATCCCGTTCATCAAGAGACCAAATTGAATGCTTGGATCCCAAACTCTTGTTGCTAG

Protein sequence

MAHDWRACLVRLKHSLSAVAPTRNFFIYHTRADLIGSGIRKSSAAKYPGRLDLLKVVLNYNRLGNCSVVIRWICVITSVDHLHPVHQETKLNAWIPNSCC
Homology
[Close]
BLAST of Csor.00g139390 vs. NCBI nr
Match: KAG6608635.1 (hypothetical protein SDJN03_01977, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216 bits (550), Expect = 5.60e-71
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MAHDWRACLVRLKHSLSAVAPTRNFFIYHTRADLIGSGIRKSSAAKYPGRLDLLKVVLNY 60
           MAHDWRACLVRLKHSLSAVAPTRNFFIYHTRADLIGSGIRKSSAAKYPGRLDLLKVVLNY
Sbjct: 1   MAHDWRACLVRLKHSLSAVAPTRNFFIYHTRADLIGSGIRKSSAAKYPGRLDLLKVVLNY 60

Query: 61  NRLGNCSVVIRWICVITSVDHLHPVHQETKLNAWIPNSCC 100
           NRLGNCSVVIRWICVITSVDHLHPVHQETKLNAWIPNSCC
Sbjct: 61  NRLGNCSVVIRWICVITSVDHLHPVHQETKLNAWIPNSCC 100

The following BLAST results are available for this feature:
BLAST of Csor.00g139390 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g139390 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6608635.15.60e-71100.00hypothetical protein SDJN03_01977, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g139390 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g139390 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g139390.m01Csor.00g139390.m01mRNA